Array 1 53304-46988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBBE010000001.1 Oceanisphaera litoralis strain DSM 15406 Ga0415265_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 53303 29 100.0 32 ............................. ACCGAGGTTGAGCTGCTACTGGAAGAGGGTCG 53242 29 100.0 32 ............................. CATTGCGACTGCTGAAAAACAACCTGGTTACC 53181 29 100.0 32 ............................. CTCTGCAAGGCTCAGCTTGCCATAGCGGCGAT 53120 29 100.0 33 ............................. GGTGTCGAATTCGATTTGCCCAGGGTAAAATCC 53058 29 100.0 32 ............................. CACACAGTAGCGGACGCACTGGATGCACTAAT 52997 29 100.0 32 ............................. CTGACTTGCTCGGTCAAGGCGGGGAGTTCGGT 52936 29 100.0 32 ............................. CGGATGTAACCGGCAGCGGCAAGATGCCCAAC 52875 29 100.0 32 ............................. TACGGTGCAGGCATTATTTAGACCTCACAACA 52814 29 100.0 32 ............................. CACGGCATACGCTACGCCGAGCACATGGCACC 52753 29 100.0 32 ............................. TTTGAGGGGAGTTATAGCACTTCTATCAGCGT 52692 29 100.0 32 ............................. CGCCTGCTCGCCCTCGGCATCGATATAGCTAT 52631 29 100.0 32 ............................. GTAGTCAGCACTTTGTGACATTGCAACAAAAA 52570 29 100.0 32 ............................. TAGCGATAAACACGCCAGCCAGGGCAACCCGC 52509 29 100.0 32 ............................. CCCTTTGGCCATGACCGTATCTTGCTTAACAC 52448 29 100.0 32 ............................. AAAAAGAAGGAAATTACCGCCGGAACCATTCA 52387 29 100.0 32 ............................. CGTCAGCCAGAACAGCGTCTTTAATAGCAGTG 52326 29 100.0 32 ............................. GCCCAGGTCAACCAGCACTTCCCTATAAAACC 52265 29 100.0 32 ............................. TTAGCCCTGAAGGAGCTAGAGTCTGCACCAGA 52204 29 100.0 32 ............................. CACGGGTGAGTCGGGTATCAGCGACATTGATG 52143 29 100.0 33 ............................. TCACCCGACGCCGCCGCCATGCAGTCGGTGGCC 52081 29 100.0 32 ............................. GGTGTAAAGGATGTGCAGGCCACGCTGCGCCG 52020 29 100.0 32 ............................. TGATATCACTCACGGCGGTTTTGTAGCTGAAC 51959 29 100.0 32 ............................. TTGGGGTCGTGGTTGAACAGGGCGCGCACGTC 51898 29 100.0 32 ............................. GTACTGGATGAAGCCACCGATCTCATGGTGAT 51837 29 100.0 32 ............................. AGCATCATTATCTGCGTCAACTGGTTCGAGGC 51776 29 100.0 32 ............................. CCGGTCAATTTATACGTCGTCACCAGTCAGCC 51715 29 100.0 32 ............................. CAGTCTGGCTTACCATGGTCGCCTACCGAGTA 51654 29 100.0 32 ............................. CCGGAGTTTTACACGCTGGTTGGCGGCGCTAC 51593 29 100.0 32 ............................. CACGATGTAGTCTCAGCAGTGCCAAGGGTCGT 51532 29 100.0 32 ............................. ATGGCGGTGCAACGGGCTACCCGTAACGGTAC 51471 29 100.0 32 ............................. GCGCACTCACTGACAACATTAAGGCCGTCAAG 51410 29 100.0 32 ............................. CACTTCCGGCCAGGTGAGCACATTCATTATTT 51349 29 100.0 32 ............................. CGCGGGCGCATGGCTCTTGCATCGATAGAACA 51288 29 100.0 32 ............................. ATCATCAGGTCGCGCTGCATAACCATGTTTCT 51227 29 100.0 32 ............................. TTCGGTTTTCATGGTGTTACTCCCTATCAAGA 51166 29 100.0 32 ............................. GGTGACTTTGCGCCGAAACTGGAGTTTATTTT 51105 29 100.0 32 ............................. TTGCTTGTATTATTTCTCACCCGCAAGATCTA 51044 29 100.0 33 ............................. CGCAATATGGCGACCTGAGCGCCACCACCTACG 50982 29 100.0 32 ............................. TGTACGGCCCCAGGCGACAATACGCCCACATG 50921 29 100.0 32 ............................. CATCACCTTGTTCGTCGTCAATCTCTTGGCTC 50860 29 100.0 32 ............................. GTGCTTGATTTGATCTGGATTCAGGTTGCTCA 50799 29 96.6 32 ............................A GGAGCGAAAAAATGAAGAGTCATCAAGAAAAG 50738 29 100.0 32 ............................. CTCGTTATTTAGAGTGGAATGAAGTTGACGCA 50677 29 100.0 32 ............................. TACCAGCGCCAGGTGAAAGGCGTAACGGTTGA 50616 29 100.0 32 ............................. GATAGAAAAGGCTCCGATAACCCGCTAATCGA 50555 29 100.0 32 ............................. CGTCCAGTGACCCGGCTGGCGGTCAATCGCCC 50494 29 100.0 32 ............................. GCGCTGCAAGTGACCTGTGATGCTGCTGGCAA 50433 29 100.0 32 ............................. GCGCTGCAAGTGACCTGTGATGCTGCTGGCAA 50372 29 100.0 32 ............................. AAACAGTGCGATCGCGATACGAGGCGGCACTA 50311 29 100.0 32 ............................. GCCGCATTGCGCCTGGGTGTGTATGTCATACC 50250 29 100.0 32 ............................. CCCGAATACACCGCCGATGCTGATATTATGGA 50189 29 100.0 32 ............................. TGCCGACGCTGTGTGCCGTCCAACTCCAAAAT 50128 29 100.0 32 ............................. CTCAACAACGATGTAGCCAAGCGGCGGATGCA 50067 29 100.0 32 ............................. AGTCTGAGGACGAGGAAGAAGAAGAAAAGAAA 50006 29 100.0 32 ............................. CTAGCTGTGGTCGGTATCGTCGCCAAGGTGAT 49945 29 100.0 32 ............................. TGCAAGATTAAAACCCGTGGCTTGTTCGCGTA 49884 29 100.0 32 ............................. CATTAAATATCATCGACGCGCATCCAGAGTGG 49823 29 100.0 32 ............................. GCGGCGCATCTGTCATTCTGAGCGACTGGGGC 49762 29 100.0 32 ............................. TCGTTGACGGTCAACCTAGCGGCCATCAGGGT 49701 29 100.0 32 ............................. GCCCAATGATGCCATCATCCACAACCCCCACG 49640 29 100.0 32 ............................. GTCAGAACGTGCCGATTACCGCTGCCAAAGAG 49579 29 100.0 32 ............................. CCCGCAACGCTGGATAATATCGGCGTATCAAA 49518 29 100.0 32 ............................. CCACAAAAGGAGCTTGTTATGGGACGCAAAGA 49457 29 100.0 32 ............................. CATTCGGATCCGGGTGAGCGGGTCCAGTCCCA 49396 29 100.0 32 ............................. GTCGCGGCGTTCTTACTGGCATGGTGTTCCGT 49335 29 100.0 32 ............................. CAATCGGCCAGGGCGGCGCGGGGGATGTGCGC 49274 29 100.0 32 ............................. GTACATACTGCCTGACGAAACTTGATTAAATC 49213 29 100.0 32 ............................. CATTTTTTACTGATTCAGTGACCTGGGACGAT 49152 29 100.0 32 ............................. CTGACTGGGGTACTGCAAGTGCAGTGTCACAG 49091 29 100.0 32 ............................. TCCAGCGGCACCGGCTTGATTCAGCAGTTGCG 49030 29 100.0 32 ............................. TATCTGGCACATAATCAGATTCAGAACTTCAA 48969 29 100.0 32 ............................. TTTTTAGACGGCCTAGTGAACGTGGTCAATCA 48908 29 100.0 32 ............................. TTATAACTGTCAGTACCGGCTTCCATGGAGAC 48847 29 100.0 32 ............................. ACCATGAGTTCAGGGAGGAATACCTTGTCTAA 48786 29 100.0 32 ............................. AAGGCAGGAAATCATATGTGGGTGCCGTTGTT 48725 29 100.0 32 ............................. TATCTGGCACATAATCAGATTCAGAACTTCAA 48664 29 100.0 32 ............................. ATTGCAGACCCGGCCATAGTTGAAGTGGGTGA 48603 29 100.0 32 ............................. TGATCGCACGGTGCCAGAAGACCGGCCAGCTA 48542 29 100.0 32 ............................. GTTACATTTAGTAGTACGGCAGGCGCCATTGA 48481 29 100.0 32 ............................. GCGCAACCGTCCCATACACTGATGTAGTAGTG 48420 29 100.0 32 ............................. ATCGGCCGCACCAAGGGGTATGTGCTCGACCT 48359 29 100.0 32 ............................. CCATTAGCAAGATCGTGCTCGGTGATACTGTC 48298 29 100.0 32 ............................. TGGCGGCAGACCTATATTTCCACCCCGTCCAG 48237 29 100.0 32 ............................. GCCGGGAACCATATGTGGGTGCCGCTGCTGGG 48176 29 100.0 32 ............................. GTGGCGCGCAGGCTTTCCATTTCGTTGCAGTC 48115 29 100.0 32 ............................. GTGGTCACATGCGGGAAAAACTGCTTAACCAG 48054 29 100.0 32 ............................. CGATCAGCTTCAGTATTGCCGAGCTGGCTGGG 47993 29 100.0 32 ............................. CCTAACACAAGACTAAGGACGCAGGCCAAGAA 47932 29 100.0 32 ............................. GTACTTGAATCGCCGATCCTTGAACGCTTCAA 47871 29 100.0 32 ............................. ATCTGCGTCCGGTAACAGATCTTTTACCACTT 47810 29 100.0 32 ............................. TTTGATGTAGCTCACAAGATCGACGTTATCGA 47749 29 100.0 32 ............................. GTACTGGGCTGCTCCGCCGACTGGTTGATAGA 47688 29 100.0 32 ............................. GCACCGCCAGCCTGCAGAATCTGGCGAAAGCT 47627 29 100.0 32 ............................. CACATCGATAAAACGATGCGAGAGCACTCTGC 47566 29 100.0 32 ............................. GTTGAGTATCAAGAACCCCCAGGTTAGTGATA 47505 29 100.0 32 ............................. GATAAGAGCCAGCCCCTGACCTACTGCAAGAG 47444 29 100.0 32 ............................. GCTGCTTTGATAGCTGCAGGCATGGCCGGTAA 47383 29 100.0 32 ............................. CTCTCTCCCTCGTCTCTCGGGGTCGCGGGGCC 47322 29 100.0 32 ............................. GTCAAGGCCAACAAGCGCCAGCACAAACCGGT 47261 29 100.0 32 ............................. CCGATGATAAGCGTACCGCTGAAGTTGACCGC 47200 29 100.0 33 ............................. CTGGCGGTAACCTACATGGCACGCACACACACC 47138 29 100.0 32 ............................. CAGCCTACTACCCGCCGTGGTGCTAAGCAGCA 47077 29 100.0 32 ............................. GTGCACAGGGAAGCCACCTTCGTTCAGGCGGG 47016 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 104 29 100.0 32 CCGTTCCCCGTACGCACGGGGATAAACCG # Left flank : CTTATCGAAGAAGTACTGGCTGCCGGCGAGATCGAACCACCCCCTCCGCCCGAGGATGCCCAGCCGATTGCGATTCCCGAGCCAACGTCATTGGGCGAGGCAGGACACAGGAGTGGCTGATTTATGAGCATGCTGGTCGTGGTAACAGAAAACGTACCTCCTCGGCTGCGCGGCAGGCTGGCCGTGTGGTTACTGGAAATTCGGGCCGGTGTTTATGTGGGGGATGTTTCCAGACGCATTCGTGAAATGATCTGGGAACAGATAAGCAAATTGGCAGAGCAGGGCAATGTCGTTATGGCCTGGGCCACCAACACGGAATCCGGCTTCGAGTTCCAGACTCATGGAGAAAATCGGCGCATGCCGGTGGATCTGGACGGACTGCGTTTAGTGTCTTTTTACCCTGTTAAAAATCAATGAGTTAGCGATCTTTAAAAAAATGGAAATCTGGTGGCTTTTTCTTTTGTAGAAAAAGCCAATTAAATCAGTTATATATGTTTAGT # Right flank : CTTCTCCTATCGGGAAAATGAGCTCAAACCGCCGGGTTGGGTATCTGCAAATGCAGTTCTTCAATCGCAGCCAGCAGTTCCGGGCTCAGGGTGAGGTTTACGCTGTCGATATTTTCTTTCAGCTGGGTCAGGTTGGTGGCGCCAATCAGGTTGCTGGTCACGAAGGGGCGGCTGTTCACAAAGGCCTGGGCCAGTTGCGCCGGGCTGAGGTTGTGCTCCCGGGCCAGGGCCACGTAGCCGGCGCTGGCTTGCTGGGCGCGGGGGTTGAGGTAGCGCTGAAAACGGTTGTACAGGGTCAGGCGGGCGCCGGCGGGGCGGGCGTTGTTTTCATACTTTCCGGTCAGCATGCCGAAGGCCAGCGGGGAATAGGCCAGCAGGCCCACCTGTTCGCGCAGGCTGAATTCGGACAGGCCCACTTCATAGCTGCGGTTGAGCAGGTTGTAGGGATTCTGGATGCTGACGATGCGCGGCAGACCGGCCTGTTCGGACAGTTTCAGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGTACGCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTATGCACGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //