Array 1 30781-29361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJKFW010000018.1 Rhodopirellula sp. JC740 soapdenovo_K_105_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 30780 35 100.0 31 ................................... GGCAATCAGCGTGAGATGCGAGACACTGCCG 30714 35 100.0 31 ................................... CGAACTCCTTCATCAAATCCCAAAGCTGCCG 30648 35 100.0 31 ................................... ATGTCGAGCTTGCTGTCCACCATCACCACAG 30582 35 100.0 31 ................................... ATGTAGTCCGAGGTATGCTCATGAGCAGAAA 30516 35 100.0 31 ................................... TGAGCTATGACCCTCGCATCGTGGACCCTAA 30450 35 100.0 31 ................................... AAGAACGGCGATATCCAATCCGCCGCCAAGG 30384 35 100.0 31 ................................... TTCAACGCCGCCGCAACGGCACCGAATCCTG 30318 35 100.0 31 ................................... ATTGTCGGCGACCAGGCCGCGAACCTTTCGG 30252 35 100.0 31 ................................... GCAAGGGAACCAGCACGCGAGAGAAGGACGG 30186 35 100.0 31 ................................... TGGGTCGGGATTCGTCTCGCGTTCTGGGAAG 30120 35 100.0 31 ................................... ACTGCGTGCGATGCGAGGGATTTGAAGCGGG 30054 35 100.0 31 ................................... ACGCGATGAACGGAATCGTCTGGAAGGATGG 29988 35 100.0 31 ................................... TGACGTGTTGCCAAACATGCGAATCGTCCAG 29922 35 100.0 31 ................................... TTTACGCTCCCGGTTTCAAAGCGGCACGAAG 29856 35 100.0 31 ................................... GGGTAGATCAGCTTTTGCTGTCGCTGAAATG 29790 35 100.0 31 ................................... ACAAGATCGGGACCGCCCTGCCGAATTCGCA 29724 35 100.0 31 ................................... CCAACGATTCATCCTGGCCCTCGAGCCCGGA 29658 35 100.0 31 ................................... ATGTAGTCCGAGGTATGCTCATGAGCAGAAA 29592 35 100.0 31 ................................... TGAGCTATGACCCTCGCATCGTGGACCCTAA 29526 35 100.0 31 ................................... TTGCGAACGCCTCCCCACTCCACGCCTTCGA 29460 35 100.0 31 ................................... GTGTGGGCTCCGCAGATCCAGCAGTTCGCAA 29394 34 88.6 0 ............................TT.-..T | ========== ====== ====== ====== =================================== =============================== ================== 22 35 99.5 31 GTGTATCTGACCTCAGCCTGCGACCAATCCGCAAC # Left flank : AACCGAATTTGACGGTGAACAAGGCCCGCTGAACGTTGTGGTGCACCGCTACGTGAACCAGTTTGGCGCATGCTTAAGAAATGAAGCGAAGTCCTTGGACTACCCCAAAAGAGCATCGTCGTGGAACTGAGTGGATATCGAAGCATGTGGACGGTTGTCATGTTCGACCTTCCGGTCGACACTCCAAAAGCACGAAAAGCTTATACGTCGTTCCGCATGGAACTGCTACGTGACGGCTTTTTCAAGTTGCAGTACAGTGTCTACGCTCGCCCATCGCCGAGCAAAGAGATTGCGAATGTGCATATTGCTAGAGTCGAACGCTGGTTACCCAACGCCGGCGAAGTCCGCATTTTCGAAATGACAGACAAACAGTTCGAAGCAATGAAGATTTTTTGGGGCCAAAAACGTCAGCCACCCGAATCCAAACCTCATCAACTTGAATTTTTCTGACCGTAGCGAAGCTGTAAATCATTTGTCAAAAAGGCCTTACAGAAGAGGTG # Right flank : CATAGTGGTCCGCTTGCGAACACCGCCTTTCGATCGAATTCAGGCGAACGCGGTGATCAGGAACTACCGCCAATTAGGGAGCGGTTCTATGAAATATGTTGTTTCCGTCCGATCGCCATAATCGAACGAATCCGCCCAAAACCCATACCTCGCAGTGGCGTTCTGTTCAGAAGCTCATTGACACGCCCGCGGTTGCGCTGAATCCTTTTCTGCACACTGAAGTGCAGATTGCAGTAACAACGTTTTGGTTAAGGCCCTGTGATGCGGCGGAAGATTCAAACCTGCATTGACCGCGAACGCGACTTTGGTGTCGAGGAACTGTTCTTCTCGACCACCGATCGTCGCGGAGTGATCCTCAGCGGAAACGACGTTTTCGTGCGCGTTTCCGGGTACGATGAATCGGAACTGATCGGCCAACCGCACAGCAAGATTCGGCATCCCGACATGCCCGCGTCGGTCTTTCGCGTCTTTTGGGATACGATCCAAGCGGACCAGCCGAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTATCTGACCTCAGCCTGCGACCAATCCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //