Array 1 2046211-2039778 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFYO01000001.1 Corynebacterium striatum strain NCTC9755, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2046210 29 100.0 32 ............................. GGTGGCGGCGGCAGCGTCAGGCCCTTATCTAC 2046149 29 100.0 32 ............................. TGTGCGCGGTGGCGTGGCGTTACCAGACATGA 2046088 29 100.0 32 ............................. GGTGGCGGCGGCAGCGTCAGGCCCTTATCTAC 2046027 29 100.0 32 ............................. TGTGCGCGGTGGCGTGGCGTTACCAGACATGA 2045966 29 100.0 32 ............................. TTGACATAGACCAGTTACCCGCCGTTGCCGCC 2045905 29 96.6 32 ............................G CCCCGGCACCGCGAAGCTGTTCAACTGGCCGG 2045844 29 100.0 32 ............................. AGGATGCCAAAGATGATGAGCAGGATTACCCA 2045783 29 100.0 32 ............................. AGGATGCCAAAGATGATGAGCAGGATTACCCA 2045722 29 100.0 32 ............................. GCAGAAAAGCCCCCCACCACAAGGGGTGAGGG 2045661 29 100.0 32 ............................. CCCATGGCGTGGTCACTTTGCCCATTTGGTGA 2045600 29 96.6 32 ............................G TAGCTACCTCACCACCCGCCAACCTGTACGAG 2045539 29 100.0 32 ............................. CCACGCGCCTGACCAGCAAGGCCAGCCATCGA 2045478 29 100.0 32 ............................. AACTCCGGTGTGGAAAACGCAACGGAACGCTT 2045417 29 100.0 32 ............................. GGGCACACCATCGGATACCGGCGCGCCACCAA 2045356 29 100.0 32 ............................. ATGGCACACACCTTAGAGTCCAAATCTAAGGC 2045295 29 100.0 32 ............................. AACCGCCATGTGGTCTTTTCATCCGTCTTAGG 2045234 29 100.0 32 ............................. GCCCTGCCTGTGGTTGGGTTCCGTAAGGATGG 2045173 29 100.0 32 ............................. TGCCAACCATCAACCAAATCACCACCAAGTAA 2045112 29 100.0 32 ............................. TGTCACGGTTGCCGAATACAGACGCGTACGCC 2045051 29 96.6 32 ............................G TCTCCCAAGTCTCCACTAAGCTCGCGACGGCG 2044990 29 100.0 32 ............................. AGGTTTTCCTGCGGTAGCAGGTCGCGGATTGC 2044929 29 96.6 32 ............................G ACGCCTACGGGGCAAATCGTGGTTGTGGTGCG 2044868 29 100.0 32 ............................. TGTTACCTCGTGCAACTTGCCTAGCCATGCCA 2044807 29 96.6 32 ............................G TTGCACCGGGCACTAGCCCCGCACCTCATTAA 2044746 29 100.0 32 ............................. CGCCCGTTGGCTGATTTGGGAGCGACCACCGG 2044685 29 100.0 32 ............................. ATTCAGCGCCTCGGCCGCGTCATCAAGCGCCC 2044624 29 100.0 32 ............................. CAGGTGACCGAACTTGGCGAGAAAAGCATCAC 2044563 29 100.0 32 ............................. GTTCAGGGGCGAAGAAGCCGATCATGCTGTAC 2044502 29 100.0 32 ............................. GGCGGGCGTGGATTGCTCCGGCGCAGTCTCCC 2044441 29 100.0 32 ............................. CTAAAACGCCTTCTGGCTGAGGCCAGCCCCGG 2044380 29 100.0 32 ............................. CCAGCAGGAGCTCAGGGAACGCCGTAATCAAG 2044319 29 96.6 32 ............................T AACCATGCCTAAGACCCTCGCAGACATGACCC 2044258 29 100.0 32 ............................. CATCTGCCCGGATAGCCACCGCTGATAAGTAC 2044197 29 100.0 32 ............................. CGCATGATCGCCAACATCGAAACCAAGCCCAA 2044136 29 96.6 32 ............................G CATTCTTTGCAACTCGGGTTGACGCTGCAACC 2044075 29 96.6 32 ............................G CCGCCACCGCCGCCCAGGAACCGTTCGAGCAA 2044014 29 100.0 32 ............................. AAGCACTTTGAAACCAAGCAGGCTATCCACGC 2043953 29 100.0 32 ............................. GCACGATATCGCTCACCTCGCCTACCATGACG 2043892 29 100.0 32 ............................. GCCACATAGGCGGAGGCCGCATGATTGAACAA 2043831 29 100.0 32 ............................. TTGTGAATACCTACCCGGTTATCGATGGGGTA 2043770 29 100.0 32 ............................. CACCGCGATGATTAGTGCAAGTGCACTCATTC 2043709 29 100.0 32 ............................. CACCATCAATCACTGGTTGGGGTACATCCAAT 2043648 29 96.6 32 ............................G TAATGCCACCAGGAAGAAGACAACCGCCATGA 2043587 29 96.6 32 ............................G AGGGGGAGATGCGCCGGGCCGCGCACCAGGTT 2043526 29 100.0 32 ............................. TCGGGTTGACACTGCAACCGGGGTGGCATATA 2043465 29 100.0 32 ............................. CCGTGGCGGAATTCGCATTGATGAAGCTATCC 2043404 29 100.0 32 ............................. GTGATGCCGGTGAGCTTGCCATAGGAGAATTC 2043343 29 96.6 32 ............................G TCAATAGCGTCATTGGAGGCCAGGCGCTTAGC 2043282 29 96.6 32 ............................G TCATAGGGGAGCTAATCGAGTGGAGCCTGGAA 2043221 29 96.6 32 ............................G TCCTTAAGGGTGACGAGTTCTGCCGGGTCAAG 2043160 29 100.0 32 ............................. AGGAAAACGAACGCCTCCGCACAGAGCTAGCG 2043099 29 100.0 32 ............................. GAATTGGACCACTTGGAAAACCTCTACGAGAT 2043038 29 96.6 32 ............................T AGACCGGGTGGCCTAAATCTTAGGTAGGTATC 2042977 29 100.0 32 ............................. CCACCACCACAGAAAGGAACACACAATGACCG 2042916 29 96.6 32 ............................G GTGATTTTGCGGAGAGCAGTTTCTACCCACCC 2042855 29 100.0 32 ............................. CCGAAACCGTCGCCCACGTCCTTGCCGTGCTT 2042794 29 100.0 32 ............................. ACGCGGGGATTTAAAAAAGCTGCGGAAGCTTC 2042733 29 100.0 32 ............................. GTGGCCGATGGCGCGCTCACGCGAATCCCACA 2042672 29 96.6 32 .......T..................... ATTGCGGAGTTGCAGCAGTCGATTGTGCGTGG 2042611 29 100.0 32 ............................. CCTTATCTGGAACCTAGCCGGTCAACCAGACG 2042550 29 100.0 32 ............................. TGCGGGTGGTTCTATCTCTTGGGGGTCTACTG 2042489 29 96.6 32 ............................G TTCGCAATAATCCGCCTATCGGTCAACGACTC 2042428 29 100.0 32 ............................. GTTCTAGCGCCCGCATTCGGGCCGGTGGCCGG 2042367 29 100.0 32 ............................. TCGGCGAATTTCTCACCAATGGTGGCCAGAGC 2042306 29 96.6 32 ............................T AATCGCGTTACCGCTACTGATTTTGAGGGCTT 2042245 29 100.0 32 ............................. AACACGCCGATTCCCGCTGAGCGGGTCAAGGT 2042184 29 96.6 32 ............................G CGCGGGTTTCGTACTAAGGATGAAGCCCGAAA 2042123 29 100.0 32 ............................. CTAGGAGGTTATACTCCGGTGAGCGTTGTCTA 2042062 29 100.0 32 ............................. CATGGCGGTTTTCTTAGCCATTCTCGGATTCC 2042001 29 100.0 32 ............................. GACGTTGACAAGGTGCAGGCTGCTGGCGACCT 2041940 29 100.0 32 ............................. CACCCCTTACCGTTGAGTGCGAAAATTCCGGG 2041879 29 100.0 32 ............................. TCGGTGCAGCCATGGGGCCTGTCTTAGGTGAC 2041818 29 96.6 32 ............................T ACGCCGCGCAATACCAAGACTTCACTGGCGAA 2041757 29 100.0 32 ............................. GCGGATAGCCGTAGCACACACGGCCCACTTAC 2041696 29 100.0 32 ............................. TTCACAAAATTTTCTCGGCCTGGATGTTCGCT 2041635 29 100.0 32 ............................. GGCAAATTCTGGAAGTCCTTCGACACCCACGC 2041574 29 100.0 32 ............................. GTCTCAAGCATGCGCGAACCAGACTTCGACAA 2041513 29 100.0 32 ............................. CCGCGCCATGTACCTTGATGCCACCATCTGGG 2041452 29 100.0 32 ............................. TACGATTCACCCCACAGGGATCGGCCGTCACT 2041391 29 96.6 32 ............................G AAGGACCGGCAAGCGCTCGAGGAGCAATTCGG 2041330 29 100.0 31 ............................. TCGCCACTATTTACGCGGAGAAGACAGGTCA 2041270 29 96.6 32 ............................G CGACCGGCTGGAACGGTGCTCTAGCAAAGACT 2041209 29 100.0 32 ............................. AGCGGTATCCCATGCGGAAGAAATCTTATTAG 2041148 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 2041087 29 96.6 32 ............................T TACGCGATATGGAACTGGATAAGCTCAACCAG 2041026 29 96.6 32 ............................G GATTCCAAAAAGGCCATGGAGTCCTTGGAAAA 2040965 29 96.6 32 ............................G ACGTCGTGCGCTACCTCATCCAGGGTTGTGTA 2040904 29 100.0 32 ............................. ACTCGTGCGCACATCACGAGCACGCACCCACA 2040843 29 100.0 32 ............................. CACGTGACGCGAATCGTAATGGGAGGTAGAAG 2040782 29 100.0 32 ............................. GCCCTCGGTATGGGAGACCTTTCCCTACTGCT 2040721 29 100.0 32 ............................. AAGGCGCGCAGCGCTTCTTTACTTCCTCGGTA 2040660 29 100.0 32 ............................. TGTCCGACTCGGGCCGGCTGTCCGGTTCAGGG 2040599 29 100.0 32 ............................. GAAACCGAAGACCGCACCCGCAAAACATAACG 2040538 29 100.0 32 ............................. CCCTCGGGCTGGATGATGACACATGGGTCTGT 2040477 29 100.0 32 ............................. CTAAACCAGGGGGCGGGCGCGTTCCGCGTTCG 2040416 29 100.0 32 ............................. GACATGCTCGATTTTTTGGCCGGGCTTAATGG 2040355 29 100.0 32 ............................. TCGGCGTCGCGGGGTAGTCCGCCGGTGATGGT 2040294 29 100.0 32 ............................. TCGCGGTTTAGTTCCATACCCTGCAACGTTCG 2040233 29 100.0 32 ............................. CCAGACTGAACCGCCCCCACAGTCAGGCCCGA 2040172 29 100.0 32 ............................. CGGAACAAGCGCGGTTTCCGCACTAAGGATGA 2040111 29 100.0 32 ............................. TATGAATGTACACGGGCGGTTGTTGGGAGTCA 2040050 29 96.6 32 ............................G TACATGCGGGCCATGGATGAAGCGCAAAAAGA 2039989 29 100.0 32 ............................. CGGCACGTGCCGGTTATCAACCTAGCGACTAG 2039928 29 100.0 32 ............................. TCGCGGTTTAGTTCCATACCCTGCAACGTTCG 2039867 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 2039806 29 93.1 0 ......................A....G. | ========== ====== ====== ====== ============================= ================================ ================== 106 29 99.0 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGCGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //