Array 1 159788-158660 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGQ010000010.1 Streptomyces sp. DH8 NODE_10_length_221557_cov_64.625782/1-221557, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 159787 29 100.0 32 ............................. CGCCCCGGCCCGGCACCCTCCCCCGCACACCA 159726 29 100.0 32 ............................. CATCCGAGCCCGCCCCCCTGGGCGCTGCGGAG 159665 29 100.0 32 ............................. CCCATCACGAAGGAAGGCCGTCGCCTTGAGAC 159604 29 100.0 33 ............................. AGGCGGCCGAAGTCCCCGAGCTTCACCGTCCGG 159542 29 100.0 32 ............................. CCGCGGGGCATCACTCGGCGTCCGGGTCGTAC 159481 29 100.0 32 ............................. CTCGCCCGCACCGAGTGGGGCACTCCGTACGG 159420 29 100.0 32 ............................. GAAGGAGCTGGACCCGACGGGCAAGGGATTGA 159359 29 100.0 32 ............................. CCCGGCGCCGTGTCACCGGCCCGGGGTGTGGA 159298 29 100.0 32 ............................. TCCCTGTCGTACCACAAGAGGCCCCCCGACAA 159237 29 100.0 32 ............................. GGCACCCCATACCCGCGGGCCAAGGACGCCGT 159176 29 100.0 32 ............................. GCCCGCATGGCCGCCACCCACACCCGGACCCA 159115 29 96.6 32 .........................C... ACGGCACTCCCGGTTCATGCCGCACCCCGGTC 159054 29 100.0 32 ............................. GTTCCCACTGCCGTCAGCAGCGCCTCGTCCTC 158993 29 100.0 32 ............................. GTCGCGATGAACAACAGCCGGGCGTCACGGGG 158932 29 100.0 32 ............................. GTCTGGTTCCTCTTCTTCGCGAGGTCCACGAC 158871 29 100.0 32 ............................. CAGGCGGGCGCGGGGGCCACCCTGACCTACGG 158810 29 100.0 32 ............................. GGGGTGAACCGGTGAGCGATGTAAACCCGATG 158749 29 100.0 32 ............................. CGTTCGACCGTGACCCTGCCCGCCTTCGGGTC 158688 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.8 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GCACCCCGGCCAGCCACACCGCCAAACGACGCCCGTCATCAGCCCCGCCGGGCAGCGAAGCAGACACGATCTGCCGCACCCGCTCCGGCAGCCACCGGTCCCACAGCAGACCGGCGACCGCAGCACTGTCGACCATGTGCCGCCACAACGGCAGCCAACCGTCATCCGCCCGCTCGTACTTCGCCCACACCACCCGGGCAGCAGGCGACAACACCTTGCCTACGAGTCGACGTTGACTCGCGCACACTTCCATCACACGGGAATCAAACGACAACCACATGGCTCGCGTCAGCCGTTCAACGCTTTTCTTACCGCAAGCCCGGCGGTCTTCTCCCGCTATGTGACCATGAAGAGCAGCCACCTCGGGGAGAAACGACACATAAAGCAGGATGCAGACGCCGAGAAATATGGGAGCTTGCCGCCATCTGTCCAATTTGAGAAGTTCAGTGAAGATGGTTCAAACCGTTGCTTCCCCTGCAAGAACACGCAGGTCAACGAGA # Right flank : TCGCCGCGGCTGGCCCAGATCGGGACACTGAGCTCTTTCCAACCTCAGGCTGACGCGTGGTGGTGAAGGATGAGGACGGCCTTCACCACGTCGGTGATGCGGTTGGTGCTGCAGCGGAGCTTCCGCAGCAGCCGCCAGCCCTTGAGGGGGGCCATGGCCTGCTCGCCGAGGCAGCGGATCTTGGCGTGGATGGTGTTGTGACGGCGCATCCATCGCTTGAGTCGACGGCCTCGGAACGGCACGCGGACAGGTCGGCCGGCGGCCTGATACGCCTTGTCTGCCCAGCACTTCACGCCTGCCTCGGCGAGCGCGTCGATGATGCCGTGAGTGCGTGCGGCGGTCAGGTCATGGGTGGAGCCGGGCAGTGCGGGTGAGGCCCACAGGAGCCGTCCGAACGGGTCGGTGAGGATCTGGACGTTCATGCCATGGCGCTTGTGCTTCCCCGAGTAGTACGGAGTGTCGGCAGCGATGCGGTCGATCGGCAGCAAGGTGCCGTCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 169383-171363 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGQ010000010.1 Streptomyces sp. DH8 NODE_10_length_221557_cov_64.625782/1-221557, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 169383 29 100.0 32 ............................. CGAGGCGCCGTCTCACCGCCTCTCAGGCTGGA 169444 29 100.0 32 ............................. GCCGACCTGAAGCTCTCGATCCACAACCACTT 169505 29 100.0 32 ............................. TCCGACCTGCGAAAAGGTGATCGGCGACGAAA 169566 29 96.6 32 ............................T CCCAGGTTGCCGTCGGGGATCGCCGGGAGGTT 169627 29 100.0 32 ............................. GCCACCGTCCTCGCCGAGATCAGCAGGACCGA 169688 29 100.0 32 ............................. TTCACCTTCGCCATGCTCGCCATGAAGGAAAT 169749 29 100.0 32 ............................. TGGACGACCGACTTACCGATGTCCAGGCCGTA 169810 29 100.0 32 ............................. TCTCTCACCTGCGGAAACGCTTCAGGGAGCGA 169871 29 100.0 32 ............................. GCTTCGGCCGCGCTGACTTCCTTGTGCCAGTA 169932 29 100.0 32 ............................. GCGAAGCGCTCCGCCTGGTCCTCGACGGCCTG 169993 29 100.0 32 ............................. CCGGCTCGGTCTCTCGGTCGAGTCGCCCACCG 170054 29 100.0 32 ............................. GCCGCCGAAATCTCCGAACTCCAGTCGATCAT 170115 29 100.0 32 ............................. CCGAGGAGCGTTTCGCCGACGGCCGCCAGGCC 170176 29 100.0 32 ............................. GGCATCGTCGTGGTGCAGACCGGTCGCGCCAG 170237 29 100.0 32 ............................. CCATCCGGCCTGTCTCGCCTGGACACCCTGGC 170298 29 100.0 32 ............................. ACCTAGGTGGCCCAGAGCCATGCCCTCCAGGT 170359 29 100.0 32 ............................. ACCTCGGCCGCCCCATTCGGGTCCTGGCAGGT 170420 29 100.0 32 ............................. CGAGAACCACGCCGACGGGCTGGGCCACCACG 170481 29 100.0 32 ............................. GCGTAGGGCCCCGGCCGAGGATGGTTTTCCAT 170542 29 100.0 32 ............................. GAGCTGAAGCGCTGGGAGAAGAAGGCCGACAA 170603 29 100.0 32 ............................. GCAGCGAGCTGGTCACCCGGCTCGTCGACCTC 170664 29 100.0 32 ............................. CACTCGGAGGTGCTGAGGTTCCAGCGGACGAG 170725 29 100.0 32 ............................. CCCGCGCACAAATGTCCGCCCCCGCCCCCGCC 170786 29 100.0 32 ............................. GAGATCGCCGGGTGCACCTGCCGACTCCAGTT 170847 29 100.0 32 ............................. TTCTCACCAATCAGGGTGGAACCCTTCGAGAA 170908 29 100.0 32 ............................. GTTCCGACATCGTTCACCGTGACCGGCCTCGG 170969 29 96.6 32 ............................T GAGCGGAACAAGCAGGCGCAGTGCCCGCCGAT 171030 29 96.6 32 .....................G....... ATGTGGCTGTGCCAGGTGTGCTGGGGCGACGG 171091 29 100.0 32 ............................. TCGCCGACCGGCTCGACGACGCCGCCGACAAC 171152 29 100.0 32 ............................. CCGTCCACTACGACCCCCAGGCCGGGCGCCTC 171213 29 100.0 32 ............................. CCACGCGAATACCTCTCGATACCTCGCGAACG 171274 29 100.0 32 ............................. GTCAACGGGCAGAATTCCTCGGGCAGCCAAGC 171335 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.6 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GTCCGACCACGACCAGTTGCTTCCCTCCGGTACCAACTACGGCGACGAGGCCGGCTGGTGACCGTCATCGTTCTCACTAACTGTCCGGCAGGGCTGAGAGGCTTCCTCACCCGCTGGCTGTTGGAGATATCACCCGGCGTCTTCATCGGCGCCCCGTCAGCCCGCATCCGGGACATCCTGTGGGACGAGGTCCGCCAGTACGCCGACCAGGGCCGGGCCCTGCTCGCCCACACCACCAACACCGAACAGGGCTACACCTTCCGCACCCACGATCACAAATGGGAACCCATCGACCATGAAGGCATCACCCTCATCCACCGCCCGGCCCCCCGCCCCGTGGAAACTCCGGCAAAACCGGCCCAAGGGTGGAGCAAGGCGTCGAAGCGTCGGCGCTTCGGCAAGACGTGACCATGCAAACGCCCCTTATGTGATGAATGCCGGATTTCTAGAAGCTTGCTTGAACGGGCGCATCACTGAATAAAAACCGCAGGTCAGCGAGT # Right flank : CGGCCCACCACCGCGGTTCTGAAGCTGGCATGCACATGAGTGAGGCGTGGACGCAGCCGCCGATCCAGAGTGACGACGGCATGAACCTGGGGCAGGCGTATGCCCGAGATCGGGCCGTCGCTGCGCGTGCTGTGTGCATCGAAGCCATGAAGTCCAGCTTCTGACGGTGTCCTTCTGTCGCCGACGCGTCCGTGCAAGGAAGCTGTTGCTGTAGCTGCGGGATGATCTCTCAATAGACCTTCTGCTGTTCCAGCCACTTGAAGACCTCGGTCCTTTTGTACAGAACTTTGGCGTTCTTGCCTCGGCCGAGCTTGTACCCCTTCAAGCCCAGCTTCGACGCTTCCCTGTAGACCCAGCTCGTCGACATGCTCAGCATCACGGCGACCTCGGAAGTCGCCATGAGGATGGGCTCGACGGGTGGGCGCCGTCGCGGGTGGGTGGTGTCGAAAGACTGCGGTTCCATGGTTGAGACGGCTCCTTCGAGGCTGGGCTGAGCGCGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 280330-280543 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWGQ010000002.1 Streptomyces sp. DH8 NODE_2_length_571672_cov_75.416669/1-571672, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 280330 30 96.7 31 .............................T GCGTCATCGAGAAGCTGCCGCCGCCCTCGAT 280391 30 100.0 31 .............................. TCATGACGTCGAGCCAGGCCGCCGCCTGCTT 280452 30 100.0 32 .............................. CGCCGAGCTCCGGCAGGACGAGGGCGGTCAGG 280514 30 96.7 0 T............................. | ========== ====== ====== ====== ============================== ================================ ================== 4 30 98.3 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CGGCCTCCTCCGCCGCCGCCTCACCGACAAGATCCCGCCCCAACTCCCCACGCCAGAAACCGCCCAACCAGGGCCCGGCGCCCCCGCTCCCGCCCGCCGCATCCTCATCGAATGCACCAACTGCGGCCGCCCCGGCCACCCCGAAGCCCTCCCGGACGGTCTCTGCCGCCCCTGCCGCCACGCCCATGCCCACGGCGACACCGCCACGCCCGCCCCCGCCGAAGTCGCCACCGTGAAAGCCCGCATGGCCAACCTCCGCACCCTCCTCAAGCCCGTCTGACTCCCGAGCGGCAGGGTCGGCCCGCTAACCAGAACCACTCCGCAGGACGCGGAGCCCCGTCTCTTACACCGAAGCCGTCCCGACGAGACCGACAGCAGGCAGAATGACACCACCCGCAGCGCAGGCGTGACCGTTTCGTAATGAAAGGTGAGGCATGCCGGTTTCTCAAGAAGTAAGTAAAAACCGCTGCTCCGCCACCTAAACCCGCAGGTCACGAACT # Right flank : GCCAGACTGCGGTTCTTTCGAGGTTACGGGTGGCCCAAAGTTCAGTCCTTGCGGGTGACTTTTCCCCGGGACGGCAACACTGTTGTCAGTGGTCCCTGTTTGACTGTGGCCATCGAACCCGGGGAGCGAGTTATGCCGACTGTGATCCATAGGACCCGCAGCGAGCTTGAGGTCCAGCGTGAGCAGCTGCTGGCGAGCGTGAACATGAGTTACGACGAGCTCGCGGAGCGTGCCGCGACGTACAGCCTCAGCATGGATGAACTGGATGTGTGGCACACGATTGAGGGGCTCGACTACCTTCTCGGAAGTGACTGCTGAAGAGGCTAAGGCCCTCGATGAGTCAGCGGCGGGTTTCGCTGACCAACTGACTGCCCTGACGCGGGGTGTTCTCGGTGAGAACACCCCGCGTTTCCATGCGATCAACATGGGTTCCAAGATCAGGGTCTCGCCGATACGAGAAGACGAAGTCCTCCAGCGAATCCCTGTCAGCATCGACGGTG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.20,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //