Array 1 22323-21551 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSHQ01000032.1 Streptomyces sp. Akac8 NODE_32_length_73818_cov_99.453434, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 22322 36 94.4 38 ....A..........................A.... GAAGCGGCGATCGATGCGGCGACGAAGGCAGCGCAGGC 22248 36 94.4 38 .............TC..................... AACTCCGGCTGCACGTATGCCACGACGGGGCGTCCGGG 22174 36 94.4 38 .........T....C..................... GGCGCGAGCGCCTGCGCGTTGTCGCCGACCGCGACTGC 22100 36 94.4 37 ..............C....................T GGCGTCTACAAGCTGGCGGTGTCCGACAAGAGCCGCC 22027 35 91.7 38 ..............CA........-........... GTACTACCCCGCATACGTGATCGCCGTGACGCCCGAAC A [22001] 21953 36 91.7 38 ........AT.........T................ CAACTAGACGGCAGCGGACCCGGCTCGGCCGTCGACCC 21879 36 88.9 37 .........T...TC................A.... CTGATCTACCCGGCCGGTGGACTCGTCATCGGACGCC 21806 36 97.2 36 ........T........................... ACGACGGGTGGAACGAGCTGACGACGCCGGGTGTGC 21733 36 91.7 36 ...........T..C...................G. CAGGAACCGGTGTACGACCCGCCCCTCGACCCCCTC 21661 36 86.1 39 ..............C....T.......A..T...G. ATCAACAGCGACTACTGGGCCGTCGGCCGCACCCTCGCC 21586 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 11 36 93.2 38 TGGCGGTCGCCCTCTGGGGCGACCGAGGATCGCAAC # Left flank : AAGGGGCTCGCCAACCCAGACGACGTGGACACACTGCGCTCCTACTACCAGCACCGCTACCGACTCCAGGCCGGACGCTCCTCCACCGACCCTAACGGAGCCACCGGAGAAGCCATTGAAGCGCTGCGAGAAAAGCTGGACTACCCGGAAACCGCCCGCAGAATGCGCATGATCGACAACGAGCACTCCGTGGCCGTCGTCGTCATCCGTCCCCAGCTCGACCAGCACGACCGGCAGGTCGCCCAAGACGCCATCGAACAACTCCGCAGCGGGGTACCGAGCCCGGAGACCTACCGCACTCTTCAAGACCACATGGCATCCATCCCACAGCGTGAAATGGATACAGCGATCAACGCCGGAGACGCTGCCGAAATTGCCGGTGACCTATACGAATGGACAGGCCCCTACCATCCACAACGAGGAATCGAACCCGCCCTGTAATGGAATCGGCAGCGGTAGAAGATCCTCCGATCGATACAGTGTTCTGGGATAAAGCGTCG # Right flank : GCCGAGGCGATCGCGGTGTAAACGGACAGCCGCGCGGCAGTTATCTCTCGCACGCATGGCCCCGTCGCCCGTGACCGGCTCCTCGGACGACGGCTCGCGGCCCGCGCCGTACGCCTCGAGCGCCGACCTCAGTGCCTGCCGCGCCTGGGCACGGTCCGCCTGCATGGCCAGGGGTGCGGGCTCGGCCATGAGGCCGGCCACCAGTGCCCTGGCGCGGCGCCCCCACCGCTCCTTGGCCGGGTCGGGCAAGGCCGACTCGCCAACCGCAAGCTCGCTACCCGGCGGGGGGAGCGCATGGAGGGCGGCGCGCGGTCAACGACCGCGTGCAGCTGCTCGCGAGCCGCGCCGGAATCCCGTATGTGGGCGGGAAGAAGGTGCGGGCGCACAGCCTGCGGGCCGGCCCGAACACCGACATGATCGCGGCCGGGGTGCCGCTGCGAGAGCGGAACCGGCGCGGCCGCTGGGCGGAGGGTTCGACCACGGCTGACACGGTCTACGAC # Questionable array : NO Score: 3.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGCGGTCGCCCTCTGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TGGCGGTCGCCCTCCGGGGCGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.40,-13.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [17-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 48463-46970 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSHQ01000032.1 Streptomyces sp. Akac8 NODE_32_length_73818_cov_99.453434, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 48462 29 100.0 32 ............................. GGGTGTGCGTTGTGCTCGTTCAGGTGTGCTCT 48401 29 100.0 32 ............................. CTGTGGACGGATTACATCGCCGACCCCGTGTC 48340 29 96.6 32 .................A........... GAGCCGCAGCGCGTTCGACGCAGAGACGAAGT 48279 29 100.0 32 ............................. TCCTCGGAGTCCTGGCAGACGTACGCCCGGGT 48218 29 100.0 32 ............................. TGAACGAACGTCACCAGCGCAGCCCCGGCGAC 48157 29 100.0 32 ............................. CACTCCGCTCCGTCCTCCGCCGCGCACTCCGG 48096 29 100.0 32 ............................. ATTCTGACGCCGATCAAAACCTTCTTCGTGAC 48035 29 100.0 32 ............................. GCCGCACGACCGGCGCGACGACCGGCGGAAAG 47974 29 100.0 32 ............................. CGCGTCCGCATCGAGCGACGGGCGTACCGCTG 47913 29 96.6 32 .......................A..... GACGAGAGCCGCCGCCCGGCGGAGCACCCGCC 47852 29 96.6 32 ............................T CCGGGCCAGTCCCGGCGCTCCGGGAGCCAGGC 47791 29 100.0 32 ............................. CCGGCTTCCATCAGCATGGTGATGGCGGTCTC 47730 29 100.0 32 ............................. GGTCTCCTCAACATCCGGTCAAGGGAACTGCG 47669 29 100.0 32 ............................. GAGTTGACCCTAAAGGCGAACAAGCTCACCGA 47608 29 96.6 32 ...........................T. GACCCCAAGGGTGCCCTCCGTAAGGGATCGAT 47547 29 100.0 32 ............................. CAGTCCGCGCTGAAGGCGGAGCCGATCGAGAA 47486 29 96.6 32 .........................C... CGGCGATGTGATCATGAAGTGGACGCCGACGT 47425 29 100.0 32 ............................. CGGGCCGCACTCCGCCAGACCGTCGCCGAGAC 47364 29 93.1 32 ...............A............T ACGGCGTGTGGGTGCCGGACGACGAGGACGTC 47303 29 100.0 32 ............................. ATGCGCGGCGAGCTCGTCGACGAGGTCACCGC 47242 29 100.0 32 ............................. TTGACGTGGTCTTCCCGCCGCACGGTGTACTG 47181 29 96.6 32 .....A....................... CGGCCTGCGTAGGACTGGAAGGTGGGGCCGAT 47120 29 100.0 32 ............................. GGCCCGCCGGAAAGGGAAGGCGCGGCGTGGCA 47059 29 93.1 32 ...................A....A.... GCCGCGGTGCAGCACGGCCAGGGTCTGCCGTT 46998 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CAACTACGACGGCCCCGACGAGGACTACGGAGACGAACTCTGGTGACCGTCATCGTCCTCACCAACTGCCCCGCCGGGCTACGAGGCTTCCTCACGCGCTGGTTGCTGGAAATCTCGGCAGGCGTGTTCGTGGGCAACCCCTCGGCCCGCATCCGCGACGTGCTCTGGGAAGAGGTCCAGCAGTACGCAGGCCAGGGCCGTGCGCTGTTGGCCCACACCACGAACAACGAACAGGGCTTCACGTTCCGCACCCACGATCACGCCTGGCACCCCGCCGACCACGAGGGCGTCACCCTGATCCGCCGCCCCGACCTTAACGCGCCCTCCCGGGGAACTCCGACGACGGAACAGAGTCCCCCTCCCGGCTGGAGCAGGGCTGCAAAGCGCAGACGCTTCGGGAGAGGCTGATGCGGAGAAAGTTCTGTATGCCCTATATGCTGGACTCTGTGGAAGTACTCGAAAACCGCTGCCACGCCGACTAAGAGGGCAGGTCGCCCAGT # Right flank : GTCGCTGGCGGCGTCTGGCGGCGCCTGGCGGCCTGGAACGAGGCCGGTGTCTGGGAGAAGCTGCACCAGCTGCTGAACAAGCTGCCGTCGAAGAACCAGCTGGACTGGTCTCGGGCGATGGTCGATTCCTTCCACGCCCAGGCCGCACACAGAGGCCGACAAGCGGCCCCAGCCCGGTCGACCACGCACGGCCGGGCAGCAAGCAACACGTCATCAGCGACGGCCAGGGCATCCCGCTCGCGGTGTCGCTGACCGGCGGGAACCACAACGATGTCACCCAACTGCTGCCGCTGTTGGACAAGATCCCGGCAGTGGCGGGAGTCGTGGGCCGGCCACGAAGGTGACCCGACATGCTCTTCGCGGACTGCGGCTATGACCACGCCAAGTACCGCCGGCTCCTGCGGCAGCGCGGGATCCGCCCGGTGATTGACCCCCTCGTCTGGAAGTTCCAGACCGGGGCTCAATGGGGTGCAGCTGCCGGAGAAGTACGGCAGGCCGGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //