Array 1 122751-124042 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028977.1 Lactiplantibacillus plantarum strain LQ80 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 122751 36 100.0 30 .................................... GAAAATATGGCATTCCGTGCTTTAATAGTT 122817 36 100.0 30 .................................... TAGATTGAGGGGTGATAGTTGATTTGCTGA 122883 36 100.0 30 .................................... TAGGTTGCGTGCTCCCAATTCCAGCAGACC 122949 36 100.0 30 .................................... CCCTTTTCTGTCCACATTATAGCATGTCCT 123015 36 100.0 30 .................................... GATCACTCTATAATCAATTTTATCACAAGG 123081 36 100.0 30 .................................... GATTTGGTCGCTTTATGCACGTCCGTATAT 123147 36 100.0 30 .................................... GGGTGGTGAAACGGATGCAGACGTTTAATC 123213 36 100.0 30 .................................... AATCTTTAATCCTTATGACGAAGAACAAGA 123279 36 100.0 30 .................................... GCGATATGTACAAGTCGCGCAGTGGATATT 123345 36 100.0 30 .................................... GCACGGCTAGTAGCGTGATCGCGTTGTTGA 123411 36 100.0 30 .................................... ACTACGCGCCGCAAACGTTGCAAGGTTTCA 123477 36 100.0 30 .................................... TTAGCCGCCGAGTTGGTTCGCCAACCTGCG 123543 36 100.0 30 .................................... ATAATGTAAATCTAATCTGACATTGCCTAA 123609 36 100.0 30 .................................... AAATGCACAAACCTACACACAAGGCCGCCA 123675 36 100.0 30 .................................... AATTTTAATTTTGCCAGCACGGTAAACGGT 123741 36 100.0 30 .................................... ACGCAAAGCCAGCCCTAGTCATGAGGTCAT 123807 36 100.0 30 .................................... CGACTCTAATGGATATTTTCAATCATAGCA 123873 36 97.2 30 ........................T........... GATGGTGCTGTTGCACGTGATCCCGCGCTT 123939 36 94.4 30 .......................G...........T AGCATAATGTATTATGTAACATATTATGTT 124005 36 75.0 0 ..........ACG.C..C.........T..C.C..T | AA [124026] ========== ====== ====== ====== ==================================== ============================== ================== 20 36 98.3 30 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGTCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGTTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAGTTTACCGGTATTCACTTTCCGACGGAGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTCGTTCAGACGCATGTTGAGCTGGGCTTGAAACAAAAACTGGTGTTGACTAATATCAGCCATTACTTAGATCAAAAACAATGGGCGAGCTTTGAGCAATTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAACACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAAGCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //