Array 1 4689-5014 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHGA01000024.1 Acinetobacter ursingii strain OCU_Ac4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 4689 26 100.0 34 .......................... TATCGCAAAGGAGATGCATCAAGTAAGTATTGGT 4749 26 100.0 34 .......................... CTTGCCTGATCATATTTTAAGTGAATTTATTCGT 4809 26 100.0 34 .......................... GAAAACAAAAATAAACGCATTCTGGAAGCACTGT 4869 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 4929 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 4989 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 6 26 95.5 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCACTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAAAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATACTTTAACTTGTTTTTAAAGCATAATATCAAATTATTAAAATAACTTATTGTTATTAAATTATTTATTAATAAGAGTTTATAGT # Right flank : TCGAGACTCCAAACTTTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGACATCCCATCAGTCCCAAAGAGAAAATACATCCTAAAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGCCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAACCCCTTTCATTTTGCCTATGCGAGAAAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTCGCTTATTTTCTTAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAAGGTAGAACTCGAAAAAGCCTATCGTTTACTTAATCATGGCCCTACTGTACTGG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 111656-105867 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHGA01000015.1 Acinetobacter ursingii strain OCU_Ac4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111655 28 100.0 32 ............................ AGTACCCAAAGTGGGTGGGGTAAAGCTGTTTG 111595 28 100.0 32 ............................ TTGACTCGCAAAATCACGTAATGCAGGTGCAA 111535 28 100.0 32 ............................ TGTGCGCGGTGGTGGATGGCATTCACTAATAC 111475 28 100.0 32 ............................ TCTTAAAACCCGCTTCGCTTCCTCAATCCCAA 111415 28 100.0 32 ............................ CAAAATAAAGCCAAGCTGTTCATTTGTAATCC 111355 28 100.0 32 ............................ CCCTTGAGCATCTTGCAACGAAGCCAAATAAA 111295 28 100.0 32 ............................ ATACGAAAAGCTAAACAATGGTGCTGGCGGTG 111235 28 100.0 32 ............................ AGCTGGTCAAATTATTCTTTCTGGTTTTGGTA 111175 28 100.0 32 ............................ ATGCGCTGAGAACGTGCCAACGGCGATACAAA 111115 28 100.0 32 ............................ TGCAAGTCAATAGCAACTTGTGTGTAATGATC 111055 28 100.0 32 ............................ AATGGTTAATGAAAATAAAATCACGGCGGCGT 110995 28 100.0 32 ............................ TGGCACTTGTGTTTTTCGAGTAGCCATAAAAA 110935 28 100.0 32 ............................ ATTAACATCTGCATGACCATAATTCTCTAAGC 110875 28 100.0 32 ............................ AATGCAGCTTTAGACAATGAAGCCGCAATTCA 110815 28 100.0 32 ............................ AATGGAAGGAAAAATATTGGGATGAAAATCGC 110755 28 100.0 32 ............................ GCCCTTAGACTCAACAATCTCAACAGACTCAA 110695 28 100.0 32 ............................ AGAACGCAATGCCAAGCCAAAACACCGATCTA 110635 28 100.0 32 ............................ GAACGGCTCAACAGATATTCAATCATTACTTC 110575 28 100.0 32 ............................ ATGCGCTGTGCCACGTTTGCGCCGCTTACCCA 110515 28 100.0 32 ............................ TTTTCCGCCGCTGCTGCTGCATCGGCTTCTGG 110455 28 100.0 32 ............................ TTGAGTCGGACGTTGATGAATCCCACGAAAAT 110395 28 100.0 32 ............................ GTGGACGATTCCAGATGCGGGGGTTCGTACTG 110335 28 100.0 32 ............................ TAGAAAATCAAAAGGTGCGGGGCAGATCAATA 110275 28 100.0 32 ............................ GTATGGGTGTATTCAATGATTAGTGGGTGCGT 110215 28 100.0 32 ............................ ATCTCTACTTACTTCAATTATTCCATCGATTA 110155 28 100.0 32 ............................ TCAGCCATTACACTTAGATAAATGGAACGGCA 110095 28 100.0 32 ............................ ATAAAACCACAAATTTATAAATCATTTTATGA 110035 28 100.0 32 ............................ TCATCTCAAGAAGACATTGATGCTTCTTATTT 109975 28 100.0 32 ............................ AATGCGAATGCTGCGGGTTCAGGCATTGATGT 109915 28 100.0 32 ............................ GTAGTTGAGAAAAACGGAAAAACTTCACTTGC 109855 28 100.0 32 ............................ TTGAATGGGTAGAAATGCCCACTGTGTTACCG 109795 28 100.0 32 ............................ ATCAACTTAACTTCCGTGATCTGATCGTCATC 109735 28 100.0 32 ............................ TTAGTGATTGCATGTACCAAGCCAAAAAAGGC 109675 28 100.0 32 ............................ AATTAGTCAAATATTCAGTTGAAGCTCAAGAT 109615 28 100.0 32 ............................ TAAACACGTTTATAACTTGTATAAATCCACCA 109555 28 100.0 32 ............................ AGACTATCGCAGTAGCAACATATCCAAAAATA 109495 28 100.0 32 ............................ AGAACCTGGAGTCGCTGACAGAAAGTTAATCA 109435 28 100.0 32 ............................ TTGATGTGACTTACTCGGCACGTTTTAGAAAT 109375 28 100.0 32 ............................ TAAGTTATTTAGCATGATTGATCTTGGTGCTG 109315 28 100.0 32 ............................ ATGGGTGATGAAGCGAAAAAGATTGATGACGA 109255 28 100.0 32 ............................ TCCACATAACACATCTTGCACATATCAATGGG 109195 28 100.0 32 ............................ ATTTAATAAAACATCTGTTGCTATACTTTCTG 109135 28 100.0 32 ............................ CATTCTTTTTACGAATAGTTTTTAATTCATCT 109075 28 100.0 32 ............................ ATGCGCCATTGAGAAGCGTTAGGGCCTTGAAG 109015 28 100.0 32 ............................ AAGAAGAAGATCGACTGGTTTATTTGAGTAGA 108955 28 100.0 32 ............................ GAATAACCCTAAATACGCTTCATGTCTACCAT 108895 28 100.0 32 ............................ TCAAAGATAGAATCTGACAAATAAGCAATTTG 108835 28 100.0 32 ............................ CAGCGATTTAATAAATAAACTGCTGCGTACTT 108775 28 100.0 32 ............................ AAACTTTAATGCTAAAGGAGCGAGTTGTTCCT 108715 28 100.0 32 ............................ TGACCGTTTACACGCTCAGGGTTTAGCCTTCG 108655 28 100.0 32 ............................ AACCGCATCTACAACTGGAATACCTGCATTAA 108595 28 100.0 32 ............................ ACGATCAACCAATATCACACGACCACTAGCTG 108535 28 100.0 32 ............................ TTTATAATATCATTTTGGTTAGTACCACCCGA 108475 28 100.0 32 ............................ TAATGGTGAGCGTTGCCAAGCAACACTAGCTC 108415 28 100.0 32 ............................ ATGTAGCCGATGGAAATGCTGTATGAAATGAT 108355 28 100.0 32 ............................ ATAAGACATCCATTCAGTATCCTCCAAGTGAT 108295 28 100.0 32 ............................ ATAAATGGAAAGACTCGAAAAATGTTGAACGC 108235 28 100.0 32 ............................ TCATATCGGTTCACACACTGGATGAATTGCTA 108175 28 100.0 32 ............................ ACACAAAAGAGCAAATTATTAACGCTTTAAAT 108115 28 100.0 32 ............................ CAAGGCTTATCAACAGGACTACACAAAATAAA 108055 28 100.0 32 ............................ ACCAGGAGGACGCAAAAAAACCGACTGGAACG 107995 28 100.0 32 ............................ TGTTAAATCGACCAAGTCAGGTCTCATTCGTA 107935 28 100.0 32 ............................ ATTTGCCAAAATTCTCCATTTGTAGGTATTGC 107875 28 100.0 32 ............................ AAACAAGTCAGGAAAATAAAATGACATTACAT 107815 28 100.0 32 ............................ AGAATCGTGACCGTTTCCGCGGGCGTTTTTCA 107755 28 100.0 32 ............................ ATCACGTACGAACTGCACACCGCGAAGTGAAG 107695 28 100.0 32 ............................ AGTAACGGTTTAAACGCTGAAACAGTATTCAA 107635 28 100.0 32 ............................ AGACGCATTACTTGTAACACCAGATGAGTTAA 107575 28 100.0 32 ............................ GCTAAAAACACGGTAATTGACAACATTAGGGG 107515 28 96.4 32 ........T................... TCAATGAGTGAAAGTGATGCTTGATCAAATTG 107455 28 100.0 32 ............................ CAATTTTCTGGTCAAGATGCGAATGCTGTATG 107395 28 100.0 32 ............................ TTAACATGCGTTTAACGATGACAACTCCAAAC 107335 28 100.0 32 ............................ ATCACTGGTGATATCCACCAGAGAAGCATCAA 107275 28 100.0 32 ............................ CGATGCAAAACACAATAAACGCTCGTATTTAA 107215 28 100.0 32 ............................ AGTAGCATAGCCTTCTGCCATACACACAATTT 107155 28 100.0 32 ............................ AAGAGATTCATGCCGATGGTTTTAAGCCATAT 107095 28 100.0 32 ............................ ATGTGTAGGAACTTCGCTAGTTCTACACCACC 107035 28 100.0 32 ............................ TGTTTGCCCTGTCACTACACGATCAAGGGTAA 106975 28 100.0 32 ............................ GTATCGGAAAATGGGAGTGTGACATGCATAAC 106915 28 100.0 32 ............................ GGGCGCAAGAATAATGGGGTAGTTCATGAAGC 106855 28 100.0 32 ............................ TGTAGCATCGCCAGAAATTGAACCATCGGTCG 106795 28 100.0 32 ............................ TAGCCCCAGATAACTCCGTGCTGTATTGATCC 106735 28 100.0 32 ............................ CAGGACTCATTACCTGCTTATGATATTCTGGA 106675 28 100.0 32 ............................ ACGACGACCAGCCAATTCCATGTGAACAGTCT 106615 28 100.0 32 ............................ CATTTAATTGGGCCACGCTGAAACTGATACAG 106555 28 96.4 32 ....................C....... CGGTACATGTTTGGCGTGTACATATGATTAAC 106495 28 96.4 32 ....................C....... GTCAGAACGTGTAGAACCGATAAAACAATTGC 106435 28 96.4 32 ....................C....... TGCTTAAAGTTCCACTTAAAAACATTATTTTG 106375 28 96.4 32 ....................C....... CATTAAAAAACCCGCCGAAGCGGGTTTGTGTT 106315 28 96.4 32 ....................C....... AGTTTCGATTCCAGCGATCGACACTGTTTTGC 106255 28 100.0 32 ............................ AAGTGGAGTGGTTAAAGTAGATGCTGTTTTTG 106195 28 100.0 32 ............................ TTCAAATGTTGCTTCACTATCAACCCAAAAAC 106135 28 100.0 33 ............................ GATTACAAAAAAGCAAGCCGCGGAATATCTTCA 106074 28 100.0 32 ............................ GCGCATTCATTTGCAGCAGGTCTACGGATTAA 106014 28 100.0 32 ............................ AAACAATTCAAGCAAATGCAGCAGTTTAATCC 105954 28 100.0 32 ............................ TTTGGGTGATATGTTGTGGCATATACTGAAAG 105894 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 97 28 99.8 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTCGCAAGGCTGCAAGATTATGTACATGTCTTATCCGCCCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAGAACGCCGTGGAATTTCAATTGAAGAGGCACAGGAACACTTTAAAGCATTAGATCTAACGGAGACTTTTGAACCTTATATCAATATGAAAAGCCAAACCAATGATATGAGCTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACGGTACCTGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : TGCAAACGATGTGTAAAAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGCTTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTTGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAATAGATGCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //