Array 1 46229-43860 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBMZ01000120.1 Acinetobacter sp. AG1 JX06_contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 46228 28 100.0 32 ............................ TGACACGGTCACTCAATCTGTTAACAGTATCG 46168 28 100.0 32 ............................ CCTGAATTAATAACAGAAACCATTTTTAATGC 46108 28 100.0 32 ............................ TAGTTGAAAACCCCCTAACCCATCTTGCATGT 46048 28 100.0 32 ............................ GATGGTTTCACAACAGCAGCTCCAGTACCAAT 45988 28 100.0 32 ............................ AAAGAATTGAAAAAGAAAACAATCGCGCTTCA 45928 28 100.0 32 ............................ TTATCTTAAAAACATTAGTCAAACGTGGGTGC 45868 28 100.0 32 ............................ GCTTACACGGCAAGAAACGACCCAATCTGTCA 45808 28 100.0 32 ............................ ATCTTTTTCAGTGCGATAAACCATTGGTAAAA 45748 28 100.0 32 ............................ TGTACCGCAGAATGACGACGAAGCGGTAACGG 45688 28 100.0 32 ............................ TGTTCCATTTGTCGAACTACATCGAGTCGAAT 45628 28 100.0 32 ............................ ATCGATATAACCTAAATACTCAGGCAACCATT 45568 28 100.0 32 ............................ ACCAAGAACCTGTTAAGCACATTGCTCTGAAT 45508 28 100.0 32 ............................ AATGTAATCGAAGCGACATCGTGCGCTTGAGC 45448 28 100.0 32 ............................ GACAATGTCTCTAACTCATTTGGCTTTACGAC 45388 28 100.0 32 ............................ ATATTCTGATGAGGAAGTCTGATCAAATGAGT 45328 28 100.0 32 ............................ ATTTGCTTTTCACTGAGTTTTGTCTGGCCACT 45268 28 100.0 32 ............................ TCATGCGTACTTGCCCCTGTTGCATAGCCCTC 45208 28 100.0 32 ............................ TTTTTTTGAACCCAAATAGTAAAACGTACCAG 45148 28 100.0 32 ............................ TATGACAACTTTGAATGTGTGCACTTAGGACT 45088 28 100.0 32 ............................ AAAGCCAATTGACAAACCACGAACTAAACCTG 45028 28 100.0 32 ............................ AGTCAATAGCACGACGATAGAAGCACTCCTCA 44968 28 100.0 32 ............................ TTTGATTTGTTCTAATCGATCTAATGGATACC 44908 28 100.0 32 ............................ TAATGGTGCCCCTGATTTTATTCAGTTTAGAA 44848 28 100.0 32 ............................ GTATAGAACATATCTTTTGCGTGATCTTCTGC 44788 28 100.0 32 ............................ TTATGAACCAGTAACAAAATCATTTGATGAAT 44728 28 100.0 32 ............................ AAGCATTAAATGCATAATCAGAAATAGCTGTC 44668 28 100.0 33 ............................ GCTGAATCAATTGCAAACTGAAGAACGGTATTC 44607 28 100.0 32 ............................ GCAAACGCATCTATCTTTAAAGCATTTGAGGG 44547 28 100.0 32 ............................ TTGCATTGTAGAAAATGCCTTACTTGAGGAAA 44487 28 100.0 32 ............................ TACACATTACACGGGGATGGCTTGTAAGGTTT 44427 28 100.0 32 ............................ AACAACACCGCCTAGTATTTTGCTAAATACAT 44367 28 100.0 32 ............................ AAACAAAGCCGCAATAAATATCATAAGAATCA 44307 28 100.0 32 ............................ TATCACGGGTTATGGTTATACAAATACACGGT 44247 28 100.0 32 ............................ ACAAACTGTTAGGAATTTTCCTGCCGTTTGGA 44187 28 100.0 32 ............................ ACAAACTGTTAGGAATTTTCCTGCCGTTTGGA 44127 28 100.0 32 ............................ ACAGCTAAAAATCAAAATTTTGTAGGTGTAGA 44067 28 100.0 32 ............................ TGTCACCGATCCATTAAAAAATAAAGATGAAC 44007 28 100.0 32 ............................ GAGCAAATATCTGCACAATTTCCTTACTTTTT 43947 28 100.0 32 ............................ TTTCAGAGTGTGCATTATTGCTGTCTCTGTCA 43887 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 40 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GACATCAGAAAATGGCTAGATCGTTTGTTAGACTATACCCATATTACAAGTATACGTCCTGTTCCTGAAAGTAGGGTTACAGGCTATGCCATTTATAAGCGTAAACAGGTAAAAACTAATCCACAGCGTTTGGCTCGTCACCGTGTGAAGCGTGGTGATATTGGTTTTGATGAAGCATTGGCTCGTTATAGTAATATTGTCACAACAACGGATTTACCTTATATCCAATTGCAAAGTTTAAGTACTTCTGTTGAACAGGATAAGAAACGGTTTAAGTTGTTTATTGAAAAGAAATCTGTTGAAAAATCTGAAACTCAGGTTTTTAGTACCTATGGTTTAAGTTCACAGAGTTCTGTACCCGAATTTTAACCCAATATTTTTATACTCTTTAACAGCTTAATAAAATCAATAAGTTATAAACGTGGGTTGAAACTTGGGTCTTTTACTAGATTTAAAGCTTAACTCACTGTTATAGCTTTATTTTTTGTGTTAATTTTATT # Right flank : GTTAAATCTAATTAATGTTTTTATTTTCTAGATATATTTGGGTTAAATCTCTTAAATAAATAAGTTTATGCTCTATTATCTAATTATTAACTCAATATTATTCTTTTGAGACTTATATTTGTGAAAAAATATTCTCTTATTTTTAGCCTCTTGTTATTCAGTTTTACTCAATTTGTATGGGCAAATACAGCTCTTCAAGCTCGAATTATCAATGGTAATACGACTACAGAAGCACAAATCCCTTGGCAAGTTGCAGTTGTACTCGACCCTTTAAAACCTTACCAATCTTACCATTGCTCAGGAAGTTTAGTTGCAGATCATTGGGTGGTGACAGCAGCACATTGTATTGAACCACTCGAAAAACAAAACAGTGATTATTATATTTTGATTGGCGCACAAAATTTGCAAAGTATTCAATTAGGGCAAATTATCAAAGTTAAAAAGGCTCATATACATGAGAAATATAATAATCGTATTTATGATAACGATATTGCATTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 33216-31926 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBMZ01000102.1 Acinetobacter sp. AG1 JX06_contig_33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33215 28 100.0 32 ............................ ACCGAGATTAATTGAATCGGTACTGTTTTGCA 33155 28 100.0 32 ............................ TCCTGAAATCATTATGTTTTCAAGAATGGGTC 33095 28 100.0 32 ............................ TAATGATATTGAAGATATTAAATTAGCTAAAA 33035 28 100.0 32 ............................ TAGTGAATTTTTTATTGCTGCTTATCCGTGTT 32975 28 100.0 32 ............................ GCCCCAGTAAATAGTATTGTACATTTGCTTTT 32915 28 100.0 32 ............................ TATTCCAGTTATTAATTCTGATCATTCTGAGA 32855 28 100.0 32 ............................ CAGAGCTTACAAACGAGCAGATCGGTCAGGTA 32795 28 100.0 32 ............................ ACCCGAACCCATAACATTCTCACGGATGGGGC 32735 28 100.0 32 ............................ ATGTGCGGATAAGCCCCAAAATTGATAGCAAC 32675 28 100.0 32 ............................ ATCACAGCAAGATTCTTTTTAAATTCAGGGCG 32615 28 100.0 33 ............................ CTATCATTGTGGTACTCCTGAAACATCGTTACC 32554 28 100.0 32 ............................ TTGATGCAGTTGATCACCGTTTACAGTTTCAC 32494 28 100.0 32 ............................ ATCAATCGAGCTTTACCAAGCGCAGGCACAAC 32434 28 100.0 32 ............................ TAAGGCACGATAAATTTTTGCTCGTACTTCAT 32374 28 100.0 32 ............................ GTGACCACACCGACTGCAGGCTTTGTCGATAT 32314 28 100.0 33 ............................ CCAACGTTGGTTTGGGATGATGTCAAAGGCGGT 32253 28 100.0 32 ............................ ATGTTGTATCTAAATTACTTAATAGAGCGCCA 32193 28 100.0 32 ............................ TTGCTCTTTCAGTATTTCGTTTGATCCACTCA 32133 28 100.0 32 ............................ ATATTGTGAAAAAGGTTTAAACCCGCCCGTGT 32073 28 96.4 32 ..........G................. CATCGAGCATCAATGAATTAATCTGTAATGCT 32013 28 96.4 32 ..........G................. AATCACAAAAAGTTTAGTTTTACTTGTCATTC 31953 28 96.4 0 ..........G................. | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.5 32 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : CGTAAAGGCAATTTGTCTTTGCAGATTACTCATTTCAATCGTATCGGCATCGACAATGGTAATTTTACCTACACCTGCACGTGCCAACAGCTCGGCACTGGTACAACCAATTCCGCCAGCTCCGATAATCAGCACATTGGCGAGTTTGAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCATTACTTAGCTCAAATTCGTTTTCAAAATGGTTTGACACGTAAATTGCTTCTTTATCATCAAAAGTGTTCATGATTTTAAGTCGATGTAGGTTCTGAGGAAAGTAATAAATTAGAACGAACACTGTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACAATTTGGGTCAAAACTTTGGGTATTTACCCAATTTTCTTGATAAATCCATGTTTTAACTTATTTTATTTACTCTATTTTACT # Right flank : ATCAAAGGAGATAGGACGGACTTTAATTTGCCAGTCGTTCAGTGTCACATAAGCAATCTCTAAATATTCATCAATAAGAATTTACTACTGATTTAATTGGATGCTCTCACCAAAATAAATAAACTTCTAAAATGATATGCTTGTAGATTTTATAAAAACAATTTGTTAAATTGCATAAACGAATATTTATTGGATATATTATGAGAAAAAAAATATTAAAATCTGCTTTTGCTTTAATGATACTAACAACATTAAATTTAAATGCTTATGGAAATATTTATATCTCTATTCCCTCTTTTAAAAAACCTAAAATTTCACCTTTCACCAAAGCACAAGCTCTTAAAACTGATGAGTTTGAAACATCAACAAAACAATTATTGGAAGAAGGTTACATACCAATTAAATCGCAAACTTTTAATGGTCGAGATGATTTTCGAGGATATGAAAATGTAGTTGCTGCTTTAGAAAAAAGGGGGGATAATCTAGGTGCTCAAATCGTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //