Array 1 190203-194141 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMID01000059.1 Acinetobacter baumannii AB_TG19617 AB_TG19617_60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 190203 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 190263 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 190323 29 96.6 30 ............................T TCACTGGATTACGTTCTAAGCCTTCCTGAA C [190349] 190383 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 190443 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 190503 29 96.6 31 ............................T CATTGAACATAACGCACCGTTTCTTTTCTTT 190563 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 190623 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 190683 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [190735] 190735 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 190795 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 190855 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 190915 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 190975 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 191035 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 191095 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 191155 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 191215 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 191275 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 191335 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 191395 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 191455 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 191515 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 191575 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 191635 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 191695 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 191755 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 191815 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 191875 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 191935 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 191995 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 192055 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 192115 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 192175 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 192235 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 192295 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 192355 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 192415 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 192475 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 192535 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 192595 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 192655 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 192715 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 192775 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 192835 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 192895 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 192955 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 193014 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 193074 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 193134 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 193194 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 193254 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 193314 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 193374 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 193434 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 193494 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 193554 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 193614 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 193674 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 193753 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [193777] 193813 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 193873 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 193933 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 193993 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 194053 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 194113 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-50] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //