Array 1 132534-135867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLEI010000001.1 Acinetobacter baumannii strain VRL-M19 m19_assembled_contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 132534 30 93.3 31 ............................TG CATTTGTGCTCCAAACTTAGTTTGTTGCTCT 132595 30 93.3 30 ............................TG AATTTTCAAAAACGAGTTGTGATCCAAAAG 132655 30 96.7 31 .............................G AACAATATGCTGATTTGATGCATCCTGAAAC 132716 30 96.7 30 .............................G TTGCAACTTTAACAACTGACGGTACTGCCG 132776 30 100.0 30 .............................. CAGCAGCACCCACCCCAAAACGTTGAACAT 132836 30 96.7 30 .............................C ACAATATTTCGGTTCCATACTTTTTGATCA 132896 30 100.0 30 .............................. TAAGCCCGCCCGAAGGGAACGCCCAAAAAA 132956 30 93.3 30 ............................TT GAGCTGCAGTAGTAACTGCACTACCAAAAC 133016 30 96.7 30 ............................T. AGTGATCCCGAAGTTGATGAAATTATTAAC 133076 30 96.7 30 .............................T ATGCCCAACATGATAAGTGACTTAGAGCGA 133136 30 96.7 31 ............................G. CATTCGCAAAGTTCGGATAAATGTCTATAAA 133197 30 96.7 30 ............................G. TCTGACGAATCAATGAATAAAACTTCATTG 133257 30 93.3 30 ............................CT GCATGGATCTATTACGACATCTGTACAGTT 133317 30 100.0 30 .............................. TACAAGGTTCAGTATCTTCGGACTTCAGCA 133377 30 93.3 31 ............................GG GAAGCCTTCAATATATTCTTGATCGTTTGTT 133438 30 93.3 30 ............................TT CGTGTACACCTGAATTTTCAAAAACGAGTT 133498 30 96.7 30 ............................C. TCTGTCTAAGTAAGCAGTAGAATTTAAAGG 133558 30 96.7 30 ............................T. CAGGTTGTGGTTCTGATTATGTGCCGGGTA 133618 30 96.7 30 ............................T. TCTAAAAGACGAAATAAAATCCGCTAGCAT 133678 30 93.3 30 ............................TT CATGTACTCCAGAATTTTCAAAAACGAGTT 133738 30 96.7 30 ............................G. TTCCATTGCGGACTTGTAAGCAAAATTCAG 133798 30 96.7 30 .............................G AATAATCAGTTATTGATGCACTATCTAAAA 133858 30 96.7 30 .............................T TCGCTGCATAAAATCACAGATTTTATTTGC 133918 30 96.7 30 .............................C TATGGTTGTGTCTTGGTCACAAGCAAAAGG 133978 30 93.3 30 ............................GC AACGCTTGAAACTAGTTACCAGGATATAAA 134038 30 93.3 30 ............................TC AAAGTTGAATTTGTGCATTTTAATCATCCT 134098 30 96.7 30 ............................T. TACAGGGTTCTGTTACTTCCGATTTAAATT 134158 30 100.0 30 .............................. GGACACTATAACGATTTTGTAGGTCGTTTG 134218 30 100.0 30 .............................. CATGAGCTATCCTCTTTTTAAGCTATTAGT 134278 30 96.7 30 .............................T TGTGAAAAATCTAGTGTCATATATCCCCCG 134338 30 96.7 30 .............................T CAGCTAGACGAGTACAACCATCGTTAGGCG 134398 30 96.7 30 .............................T ATTTAATTTGAACCAATAGACGCAGTTATT 134458 30 93.3 29 ............................TG GTTGATTGAAATGCATTTTGTGCGAATGG 134517 30 96.7 30 .............................T TGTTAAAGTAGGCGCTGAAGCTTTACCTGT 134577 30 100.0 30 .............................. TTACAGAACATTGGGGTGTGCCATATATGA 134637 30 96.7 30 .............................G TTATCGTGACTAAGTCTGCTCAAAATACGA 134697 30 93.3 30 ............................CC AAGAATTAAAAGACAAGTTGTTTGTAAATA 134757 30 93.3 30 ............................TT CATCTGCAACGTCTAAGCCGCCAATACGGT 134817 30 93.3 30 ............................GC TAGGCAAAATAAACCGTGAGCTGTCAGAAT 134877 30 90.0 30 ........T...................CC TACAAAAAAACAGCTAGCTGCGGGCCCTCG 134937 30 96.7 31 .............................G ATCTAATTAGATATTCTATGCAATGGAAACA 134998 30 93.3 30 ............................CG TGTCCGCCCAATTTGGCCAGTAGTGTAGAA 135058 30 93.3 30 ............................GC TTTAATCGTGTGTGGGATGTTGGGATTTAC 135118 30 93.3 30 ............................TC AGTAGCCAATCCTAAACTATGTGCTAGCTC 135178 30 100.0 30 .............................. CCTGAGTCAGCTCGAGGCAAATCAATACGA 135238 30 96.7 30 ............................T. AACCATTAATGACCCTGCAAAACACTCCGG 135298 30 96.7 30 .............................T TCTGAGCTTCATAAAGTTTTTTTGTTTTTT 135358 30 96.7 30 ............................C. TTTGAGCTCAAGTAAACTGAAACTGGTTCA 135418 30 100.0 30 .............................. TCTGTATAATTCCCTCTGCAGGGCGTAAAT 135478 30 96.7 30 ............................T. TCGGCTTGCTGTATATTGAGATTTAATTAT 135538 30 100.0 30 .............................. TCCAAAGATTCGAAACGTTTCATGTGTAAT 135598 30 90.0 30 ..................T.........TG AACATTACTCTTTTATTTGGTTTTGTTGCA 135658 30 96.7 30 .............................G ACTGGTTGGCAAAGCTGAGGGGATCACTCT 135718 30 96.7 30 .................T............ ATAACCACGGTTGTGGTAAGTCACTTTTAC 135778 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 135838 30 63.3 0 ...T...A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 56 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATTTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGAACAGCCTGCTGAAGTTGAACAGATTAAACAGTTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //