Array 1 1376662-1375106 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNFD01000001.1 Microbacterium suaedae strain YZYP 306 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1376661 29 100.0 32 ............................. ATGCGCGTGACACGGTCGAACTCGCTCCGGAT 1376600 29 100.0 32 ............................. CGCGTCTTGAGGGAGTCGGACCAGGGCGGGAC 1376539 29 96.6 32 ............................G GCCTTGATCGCGCCGGTCTGGTCGCCGAGGAT 1376478 29 96.6 32 ............................G CACTTCGACGAGCTCGAACGCGCAGTGGACGC 1376417 29 100.0 32 ............................. ACGCTGATCGACACGTCCTGCCGCACCGTCTT 1376356 29 100.0 32 ............................. TGCACCTGAATGTTCATGGAGTCGGACACGTT 1376295 29 96.6 32 ............................G CGCGTCGTCGACACGACGAGCCTGGTGACGCG 1376234 29 96.6 32 ............................G CGCGTCGTCGACACGACGAGCCTGGTGACGCG 1376173 29 100.0 32 ............................. CGTCCCGTCAAGACTGACCGCAGGACCGGGCC 1376112 29 100.0 32 ............................. CGTCCCGTCAAGACTGACCGCAGGACCGGGCC 1376051 29 100.0 32 ............................. AGCTGGTGCATCTCGCCGCCCGGATCCGTGAG 1375990 29 100.0 32 ............................. CTCGATTCGACGGCAGCAGAGGCACGGCAGCT 1375929 29 100.0 32 ............................. GACCCGGCGACCGAGCAGGGCGTGCTCACCCT 1375868 29 96.6 32 ............................G GGCCCGACGAGATCGACGGCGTCCCGTTCTAC 1375807 29 96.6 32 ............................G CGCGCGCAGGAGATCCTCGGCGGCAAGCCGTC 1375746 29 96.6 32 ............................G CGCGCCACCTGCCGCGCCCATTCCGACAGACT 1375685 29 100.0 32 ............................. TCCTTCGCGACGTTCTCGGTGATGCCCTCCAT 1375624 29 96.6 32 ............................G TGGGCCGTGACGCCCTGGGCAGGCACGAACCA 1375563 29 96.6 32 ............................G GACCGGCCCTCCTCGGGCGGCGATGGGTCCAA 1375502 29 96.6 32 ............................G GCCCCGCACTATCGGCGGGGCCTCGATGTCTG 1375441 29 100.0 32 ............................. TGCACGAGGATCAGGCGTGCGGTCCCCAGTTC G [1375424] 1375379 29 96.6 32 ....................A........ CATTCGGGGAGCCCGAACTTTAAGTTGAAGAA 1375318 29 96.6 32 ........T.................... GGTGCCTTCCAGGTCGCGGCGGCGAAGGCCAC 1375257 29 96.6 32 ...............C............. CATCGCCAACGTGCGGGTCATGCAGCGCGCCC 1375196 29 96.6 33 ...T......................... ACGGGGGGAGCGATCGCACGACGAGTACAGCGA C [1375179] 1375133 28 96.6 0 .....................-....... | ========== ====== ====== ====== ============================= ================================= ================== 26 29 98.0 32 GTGCTCCCCGCTCGCGCGGGGGTGATCCC # Left flank : CCTGTCTTTTGAGCTGTCCTAGCGTTCCGACGTACGCGGTGAGCGAGCCGCGCACGCCGGGCCCGGGAACCAACCCCGCGTATGCGGGGAGCACGTGGAGATCGATGAGACCGGTCCGCGTGCCCGCGAACCAACCCCGCGTATGCGGGGAGCACTCCAACTCCTCGAGCATTAGCTGGATCATCCCCGCGGGTGGGCAGGGAAACCGTGCGCGGCTCGTGCATCATAGCTCTGGGTGAGCCGCAGGTATCTTGGCGTCTCCCTCACGGTCGCACACCCGGATGTGCGCGATCCTTGGGCAGCATTGGTCATCTGGAGAGACGCATCTGAATGGAGGGACGTGGTGGCAGCTTGATGTTGGTTCATCGGGTCTCGCGCCGGAGGCCATGTTTGCGGCGACTTCCGCGTGCGACGCCAGCATCTGTTCTATGACGTGTCGGTGGCAGCTCCAACTGGATCCGGAACGGAGTGGTGTCGCATAGAATGCCTGATCAGGAAGC # Right flank : AACGAAAGCCCGCTCTGTGACGGCGAGGACGGGTGTCCCGCTCGCGTGGGGGGGGCACGGCCGGACGGAGGCCGGGCCATCGTCCGCGCGAGCGACCGACAGCCGGCCACCCAGTGGCCTTGGTCTGGACCGCCTGTGGCCAGACTGAGAAGTTGACCCCCGAGGTGGCCGGATGTTGGCCACGGGTCGGGGGTGGAGTCGCTGCACTGCGAGTTCTCGGGCGCACCGACGGCCATTCGTGGCCATGCCGTGGCCACGCCGCGGTCATCCTGCGCCAGTCTCCTGGACAGAGACCCCGGAGCTTCGGAGGAGGATACGGACGTGCGCCAATGCTGAGATCCGCGTCACCGCGCGATGTGTGCGTGCGGTTCATAGGCGGCCATTGGGCGGGCACGACCCGCTCCCAATCTCAGAATTGGGGGTAGAATGGGGGGCATGGCGCAGCAGAAGGCGAAGAAGGACGCGGCACGGAAGAATCTGCAGCACGCCACCAGCAAGCC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCTCGCGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.10,-12.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //