Array 1 330617-324062 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSSV01000002.1 Algoriphagus ratkowskyi strain DSM 22686 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 330616 30 100.0 36 .............................. AGATTCTAACGATTACTACCAACGCACCCGACCAGC 330550 30 100.0 35 .............................. TGTAGTGGATGCAAGAACTTGCTTGCCTAAAGGCC 330485 30 100.0 36 .............................. TAGTGGGCTCAGGGTACTATACCGGGGGATTTACTG 330419 30 100.0 36 .............................. TCAAAATGTATAACAGGGACCTCCAGTATATTCTCA 330353 30 100.0 36 .............................. CAGGGGACCCCTACGCAGACGAAGCAGCACTCTTCG 330287 30 100.0 36 .............................. ATGTTTACACCAGCGGAAAAAACTTTGCAGGACAAG 330221 30 100.0 36 .............................. TGAGATGAGCGCAGCTATTACGCTGTCAGTCGAAGC 330155 30 100.0 35 .............................. TTGTCTCAAGCAGGGCTGAAACCTAACCGACTAAC 330090 30 100.0 35 .............................. CTGAGTCATTTATGAACAGGATTAAACTTAGATCT 330025 30 100.0 36 .............................. TTACTTCAAAGATGTAATTATGAGTGTCGGTATGAA 329959 30 100.0 36 .............................. ATGACTCTGACATGCAAGGTTTAATTATCAGAATAG 329893 30 100.0 36 .............................. ATTTCAGAGGGTCAGATATTAGACGGTTTTGCGATA 329827 30 100.0 35 .............................. CATAGATATGTGCGTACGCATCGCTCGCGAGAATA 329762 30 100.0 36 .............................. TCTCGATCACAGTTGTGTCGAGCTCTTCTACACCGG 329696 30 100.0 36 .............................. CAGTGATCGCAGCTTCTACCAGAGCGGTAGCGTTTG 329630 30 100.0 36 .............................. GAGGCGAAGACTTACTTCGACACCTTCCAGTTTGAA 329564 30 100.0 36 .............................. ATGGATCAACCTTGGTAGGGAGCTCAATATCCAACT 329498 30 100.0 36 .............................. CAGGATGAGATTCCAGGGAATGCCCCATAGGACATA 329432 30 100.0 36 .............................. TGCAGTTCTGTTGAGCTTTTGCCTTTGTAGAACCCA 329366 30 100.0 35 .............................. GAGCAGGGAAGTGCAGCACATTGGAGGGATAAGTA 329301 30 100.0 36 .............................. TAATTACCCAAAAGTGCCCCTTAATAGGGAAGCTGA 329235 30 100.0 35 .............................. TGAATAACTAGGCTTAGTCTTCGCCTTCAGTTGGA 329170 30 100.0 36 .............................. CATCATGAGTGAACCTCGCTTAGGCTCCCGCTTTTT 329104 30 100.0 36 .............................. AGATGAGATTCATTAACACCATTTTCATACACTGCA 329038 30 100.0 36 .............................. CTGGAACAAGATTAGGATCTGAGCATCAGCCAGAAG 328972 30 100.0 36 .............................. AAGTAGGCAAAAGCTACCTCCCTTGGGCACCCAAAT 328906 30 100.0 35 .............................. TCATGCAGCACACGGTACAGGAGCTAAACATCTTG 328841 30 100.0 36 .............................. CTAAAGTGGCTGTGTCGTACTCGGTTTTTAGCCAGG 328775 30 100.0 36 .............................. TATACTGGCGCTGTGGCATCTTGATGGTGTAGGCTT 328709 30 100.0 36 .............................. CGGAGTCACAGTCAAATTAACGACCGTTGGATTCTC 328643 30 100.0 36 .............................. TACGAAAAGGACGAAGAAGGGAAAGACATCACGCAT 328577 30 100.0 36 .............................. AGAGTTGTGGTTGGAAGCAACATTACAGGATCTTAT 328511 30 100.0 36 .............................. TATTATGAAAACATATAAAGATGTTTATGAATTACC 328445 30 100.0 36 .............................. TGAAGAACTACTTCGGACTGAAATACGATTTCAACA 328379 30 100.0 35 .............................. GCAGATAAAGATCGTGAGTTCACGCATGTAATCGC 328314 30 100.0 37 .............................. CATTCCAGCTACAGCTTGGGAGAAGCCTTACAAGATT 328247 30 100.0 36 .............................. GAGTTTAACTACTTCTTTCAATTGATGAATGAAAGG 328181 30 100.0 37 .............................. CTGGAAGGGTTGAAATTAGAGGCGTAGGAACTGGCAC 328114 30 100.0 37 .............................. CAAACTCCACCCCCTCCCATTCATCAAATTTAGGCTT 328047 30 96.7 36 .....................G........ TATTTTATTCTCTTTCCTGAGCCTAGAAACTACTTT 327981 30 100.0 36 .............................. TGGATGGCGTGCTATTCCATGAGAAGAGTAAATGGG 327915 30 100.0 36 .............................. GTACATCAGCTACTTGCTGCGCTATCCAGAGATGCC 327849 30 100.0 36 .............................. TGAGCTGGTCGGCCTTTTCCTTGCTTTTCAGGATGG 327783 30 100.0 36 .............................. TTGAGACGTTTGGATGCAATGTGTCTAGAAGCTATT 327717 30 100.0 36 .............................. GAAGCTCCACACTACAGGAGAACTTAACGTGGACAC 327651 30 100.0 35 .............................. AGTGGATCATCGAAGGATTGCCAGGCTTTGTCTTT 327586 30 100.0 36 .............................. ACGCTTGACCAGATGAATACTTATTTGGCAAACAAC 327520 30 100.0 36 .............................. ATATTTATTGATGGCCTAGCCGTCAGCATGAACCAA 327454 30 100.0 36 .............................. TTTCCTGACAGATAAGAGGTTTTGGAATTGTCTGGA 327388 30 100.0 37 .............................. CGCCTTTGTCAGTTGTACTACCTCAATTGGCTACAAA 327321 30 100.0 36 .............................. GATATTGAGCAAGTAGAACAAGCAACGGATGTGCTT 327255 30 100.0 37 .............................. AACAGTAAAGAATTTGTATGCGGTATTTTCAGCCCCA 327188 30 100.0 37 .............................. ATAGAATCAAGTCCGACGGTAAGCCACTGCGACCTGG 327121 30 100.0 36 .............................. ACTCATATAGCAATCCTAGACGAGGCGCAAATCAGA 327055 30 100.0 36 .............................. AAAGGAGATCATTATTAGGAAGGATGTTGGTTTTGA 326989 30 100.0 36 .............................. CCACGAAAGCGCAAGACGTGGCGCAAAAACAGGAAC 326923 30 100.0 36 .............................. GTGGCTCTTTGCTCCGAACCGATTCGTAATTGACCT 326857 30 100.0 37 .............................. TCAGGAGAAAAAGAACTCAAACCGTAGAGGAAAGTCT 326790 30 100.0 35 .............................. CCGATCCAGTTGATCCTATCGAGCCACCAATTGAG 326725 30 100.0 36 .............................. CTAGAAACACCCGCTTTTCCCCTATTTTCTCAAATA 326659 30 100.0 36 .............................. CTGCAATCAATGTAGAGTTGCCACCTAATCCAAAGA 326593 30 100.0 36 .............................. CTGAGCGTAGATGTCTCGACCGTCAGAGCCTGTGCT 326527 30 100.0 36 .............................. GAAATTAAGGATATCATCCTTGGTTAATTTAGATTT 326461 30 100.0 35 .............................. TGGCTATCTGATTATAGTTTGATAAATAATTTCTC 326396 30 100.0 36 .............................. TCGTCAACCATGTGACAGCCCCGTGTATGCTTAAAA 326330 30 100.0 36 .............................. ATTCAACCAATCGATCTGCCAGTGCATCTGGCGTAG 326264 30 100.0 36 .............................. GGAACTCATCATGAAACAGGTGATGAAAGATCCCAA 326198 30 100.0 36 .............................. TTTCCTCTGCATTGTCAAAGGGACAATCTTCTGTAT 326132 30 100.0 36 .............................. CTACGAGGGACACCGCTACCAAGTAGGTGATCGCTA 326066 30 100.0 36 .............................. TATAGTACAGCTGCTAAGGAGGCGGCATTGAATCTT 326000 30 100.0 35 .............................. TGTCGAGTCCGATATTCCAGGACTTCATGTCCATA 325935 30 100.0 35 .............................. CTGTATGTCATGACTACTAAGGGTATTTGGGCACT 325870 30 100.0 36 .............................. AGTAGTAGTCCAATCTTCCTGAAAACTCCGCTATGT 325804 30 100.0 36 .............................. CGGATTGGATTATAGGTGTAAGCAGGATCTACAGTA 325738 30 100.0 36 .............................. TTAGGAAAAACACTAGACAAGCTGTGACTGCTGGTT 325672 30 96.7 36 ............T................. ACGAGTATGATGGATATGATTAGCAGATAAAAAAAC 325606 30 100.0 36 .............................. TGTACTGAGACAAGCTCCGGATGTGCAAATCAAACA 325540 30 100.0 36 .............................. GATACAGAAATAGCGGAATGCCCATGTCGATGTGGA 325474 30 100.0 37 .............................. AGAACATGCCCGGATATGCCTGATCAAATATCAGCCA 325407 30 100.0 36 .............................. CATTGTGTCCGAGTGGGAGTTCGTCCGAAGTGGGGA 325341 30 100.0 36 .............................. GCGCGAGATAGGCTGTGCCGGTGATCCATTGGGATA 325275 30 100.0 36 .............................. TGATTTGCTTCACGATGTCCAGGTTGCGCTGATTGT 325209 30 100.0 36 .............................. AAGTATAGTCATCCGGTGCTTCATTGAGCTGATCCA 325143 30 100.0 36 .............................. TGGGCTGCTGGGTAGATTGTTGGTTTTAGAACCCTC 325077 30 100.0 36 .............................. GACCTTATTTAGAGGATGTGATAGCAGGAGCAAATA 325011 30 100.0 36 .............................. GTTCCTGAGATATTAATAAACGAGGAATCAAAGTGT 324945 30 100.0 35 .............................. GGCAATTCCAGCGCATTCAACCAGCGCGCAAACGA 324880 30 100.0 37 .............................. AAACTAAGGAAGACACATGAGATACCTATGGACTCCA 324813 30 100.0 36 .............................. TGAATTTGAAGCTATCCAAAAGGCAATTTTAGAAAA 324747 30 100.0 36 .............................. CGAACTATCCATAGCCAAAGCCAAGATGTACAAGAT 324681 30 100.0 35 .............................. ATAATCAGGCAAATTGTTACTAAATTGGCATAATA 324616 30 100.0 35 .............................. ATGTAATCAGCGGAAATGATGGCCTTCTTGAAGTA 324551 30 100.0 36 .............................. GTAACTCCAAAGATTCTACACCATCACGGCTCCATA 324485 30 100.0 35 .............................. TCGATATCCGAATCGAGCGTGAAAACAAGGTTGTC 324420 30 96.7 36 T............................. TCAGGTCAGGATAATCATAGAAAAAGAACTTATAGC 324354 30 100.0 36 .............................. GATAAGAACCTGAACGGGAAAGTAGATAGCTGGGAG 324288 30 100.0 36 .............................. TCGAAGGAGGCGTCGATGAGGGGGAAGAGGGAGAGG 324222 30 93.3 35 .............A....T........... TCATCCAAGTGGATCAAGAACGATCAGCCCTATAC 324157 30 93.3 36 ..................TA.......... TGGGATCATCGGAAAGCTGGAGCATGAGATGTCTGA 324091 30 80.0 0 .................AT..C...T.G.T | ========== ====== ====== ====== ============================== ===================================== ================== 100 30 99.6 36 CCTTCAATCGCACCTTATCGGAATTGAAAC # Left flank : AACCATTCAAAATCTGGTGGTAATATGTATGTGATCTTGGTTTATGATATGGGAGAGAAGAGAGTAGGGAAAATGCTCAAGTTATGTCGGCAATACCTCAATTGGATTCAAAACTCTGTTTTTGAAGGGGAGATTACAGATGTAAAACTCAAGGAGTTGCTGATTAATACCAAAAAATTAATGCGGCAAGAGGAAGATAGTATCATTATCTTCAAAAGTCGGGATCAGAAGTGGCTTGAAAAAGAAGTTTATGGAAAAGAGAAAAACAGTCTTGACAACTTCCTTTAAGGTAATTGATTGTCGATAAGATGAAATTCTCAATAGAGATCAGCTAAATTTTGGAAGAAAATACAGAAATCCTTGAATACTCGCTGCAAAAGATGTTGTCGAACCCCAGGGTAAAATCGGGTACTTCACATCGACAACTTTTCCTTCTAAAAATTAGTAGAAAAACCTTCTTATTTTTAAAATTTGCCCTATTTTTGACTTTGGCCGAACGG # Right flank : TATTAAATTGAATTTTGCCAGCTTCAAGAATAAGTCTCAAGGTGTCAATACTAGTGTAGTGATAAATCATAGAGTTTTTCTATCAAAATTCAGAACTTTCAAAGATTTTTACCAATCTTAATTTAGTCGATATATAATTTACGGCAGATGAAATATACCCTGTATAGGGTATATTTAAGATTGGAATTATCATTTTCTTAGCAGAAAATTAACGGTATTGTCAGAAGAGTAGCTTCCCTTTCTAAGGAAATTAGGAAATTTTCAAATCAAAGTTTAACCCTTAAAACCGAATGAAGGTCTTATTTACCTCAGTGATTTTCTTATTACTTCTATTCGTAAATACAAGATCCTTTGCTGCTGAGATCTATGAAGTCACGAGTGATGTTTTTGTCAGATCAGGAATAGGAACAAGCTATGAGGCAATAGGCATAGCGAAAGCGGGTGACCAAATTAATGTTCTTGATAAGTCAAACCCAAACTGGTTTAGGGTAGAATTTGAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTCAATCGCACCTTATCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //