Array 1 746-9 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRNJ01000018.1 Prevotella histicola JCM 15637 = DNF00424 contig018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 745 47 100.0 30 ............................................... AACCGCCACTTAACGAAGTAATCACCGAAC 668 47 100.0 30 ............................................... TACCACTGTGACGATAGTCAGATAGACCAT 591 47 100.0 30 ............................................... CACCTTCTGACATATAAGATGGAGCATTTG 514 47 100.0 29 ............................................... TCACGAATATCAGTTTTAATACTCTGACG 438 47 100.0 30 ............................................... TCTTCATCAATTATTTTACCTTGCTTTAAG 361 47 100.0 30 ............................................... GAGAGATTCAACGGAGTAACTATCATAAGG 284 47 100.0 29 ............................................... TCACGTATGTCAGTTTTAATGCTCTGTCG 208 47 100.0 30 ............................................... GGAAAACTATTCCAAACTTCCATATTTCAC 131 47 100.0 29 ............................................... AACCTTTAGCCTAAAGCTATCACGGAGAT 55 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 10 47 100.0 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : GCG # Right flank : CTTAATGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [11.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 69624-69271 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRNJ01000034.1 Prevotella histicola JCM 15637 = DNF00424 contig034, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 69623 47 100.0 30 ............................................... AATTTCCAAATCTTTAATCTTAATTTTCAT 69546 47 100.0 29 ............................................... CTAATTTTGCACCAGTGGATGCAGAATGT 69470 47 100.0 30 ............................................... CGCTTTGTTTAATGAAGTTATTGCTCGTAG 69393 47 100.0 29 ............................................... TAGATATAAATAATGAAAATATAAAGAAT 69317 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : TACTGGT # Right flank : TGAAGTAGCGTAAGAAGTTGGTTATCAACACCGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTATAAATAAAGTTCCACCGTTAGAAGTGGAACTTTATTTATTTCTAAAACAACTCTAATTGAACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTTCCGTACGTTGGAATAAAGGTGGAAACTCTTTTTATATGCACTTCCATATTTTCTTTACTTCCACAATGGCGTATATAAATAGAGAACTGAAACATTGTAAACCCATCTTTTAATAGGTTCTGACGAAAGAGAGTAGCAGCCTTTCGTTCTTTCTTTGTATCTGTGGGTAAATCAAAAAACACCATTAACCACATGCTTCTATATTGACTAAACCTATATTGTTCCACTCATTTGCATTATAATTCTGGATAAGCCATTCTTCTTAATTCGCCATTGAAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //