Array 1 3126895-3128062 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082822.1 Pseudomonas aeruginosa strain SCAID WND1-2021 (9/195) chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3126895 28 100.0 32 ............................ TGTCAGAAGGGATTACCGCGGACCTGGTCGCA 3126955 28 100.0 32 ............................ TCAGGCTCATTTCGTTGTCCTCGATGCCCCGG 3127015 28 100.0 32 ............................ GGGAGGGCATGTGATGCGAGCAGACGAGTACC 3127075 28 100.0 32 ............................ GGGCCCGACGGCTAGTAATTCGCGGAGGATGG 3127135 28 100.0 32 ............................ TGTCCGCAGCAGGCCGGTAATCCGGATAACTG 3127195 28 100.0 32 ............................ TGTCCGACAACCCGCATAGCATCCCTGAGCAA 3127255 28 100.0 32 ............................ AAGGACTCTGATCTCTTGACTCACCATTTCCT 3127315 28 100.0 32 ............................ CGCTGCCATCCGGCGCATTTCCCTCTCATAGC 3127375 28 100.0 32 ............................ AACATCCAGCCCGAGCTGAGCGATATCCCCCG 3127435 28 100.0 32 ............................ TGCTCGCTGATGACCAGCCGCAGCGCATGGTT 3127495 28 96.4 32 .......................G.... CGCAAAGCCCCGCAGGACAATGACTTGATATC 3127555 28 100.0 32 ............................ AATCCGAGGCGGAGTTCAGCCACTTGGCATAG 3127615 28 96.4 32 .....................C...... GCAGTGATCGAGCGCGCACGGTCGCGCAAGAC 3127675 28 100.0 32 ............................ AGAAGCGCATCCAGCGATACGAAGATGCACTC 3127735 28 100.0 32 ............................ AACCAGCGTGTCGATGCCGAAGCGAAGGCCCG 3127795 28 100.0 32 ............................ AGTGAGCACGATCATCATGTCGGCCTGCTGGC 3127855 28 100.0 32 ............................ ATCACCGGAGGCCACGGATTCGCTGTAGCTCA 3127915 28 100.0 32 ............................ ACCAGCTGCTGCGAGTGCTGGTTCGCGCTGGC 3127975 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 3128035 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 20 28 98.2 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGAACTTCGTTGCGGACATGCCGATGAGGTGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3138895-3136587 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082822.1 Pseudomonas aeruginosa strain SCAID WND1-2021 (9/195) chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3138894 28 100.0 32 ............................ TGGGGCGAAACCCCTAGGCGCCGGGCTAGCTC 3138834 28 100.0 32 ............................ TCCTCAAGTTTTGTCAGCCGAGCCAGCATTTC 3138774 28 100.0 32 ............................ TCGATGCCCCGGCGAACCGGGGCGGGGTGGTT 3138714 28 100.0 32 ............................ TGATTGCTGCGGCACCTGAACTGCTCTCCATT 3138654 28 100.0 32 ............................ TACCCCTCATTAGCCCGGCAAGTCCGGGCATT 3138594 28 100.0 32 ............................ ACTCTGCGCCTCGACGTCGGGATCTACGAAAA 3138534 28 100.0 32 ............................ AAAATGAAACGGATCAGCTCGCCGACAATCTC 3138474 28 100.0 32 ............................ TGGAGCGCTGCACCATTACCCGCGCAGCCCGA 3138414 28 100.0 32 ............................ ACCCGAATGCATCACCAACCCACGGCGTGCCC 3138354 28 100.0 32 ............................ CTCCAGAGCGGGTCCGACAATAGTCAAAACCC 3138294 28 100.0 32 ............................ AGGACTCAGCGAGCCTTCACAAGACGCCTCCA 3138234 28 100.0 32 ............................ ATCGAGCAGTGCATCGCCGTCTACAACCAGCT 3138174 28 100.0 32 ............................ TGATCGACATCAGGAACGCCCACAGAGGCCGC 3138114 28 100.0 32 ............................ ATCACGCCCCAGCCACTTTTCAACCCCGCACT 3138054 28 100.0 32 ............................ GGTGTGTGCGGCCAGCTCGGACCCGAACTTGA 3137994 28 100.0 32 ............................ AGTCACAGCCGCCGCAGCAGCCAGACCGCCCG 3137934 28 100.0 32 ............................ TTAGCGAGTCACCGGGACAAAGGTGACCACGG 3137874 28 100.0 32 ............................ TGTCCGAACTCCCATCTGTTGCCCTGATCAAC 3137814 28 100.0 32 ............................ AGAAACTGCGGAACCGGAAGTGCATTGATCAA 3137754 28 100.0 32 ............................ AAGTTCGTGACTGAGCACCGGCACCTGGGCAT 3137694 28 100.0 32 ............................ ATCACGTGTGATTTTCGATGAACGTGATTTTT 3137634 28 100.0 32 ............................ GGAACGAAGCGGGTGCGACACGTCGCAACTGC 3137574 28 100.0 32 ............................ AGACCATCACACCGGTGACGCTGCACATCGTC 3137514 28 100.0 32 ............................ GCATAAAAGTGCCAACGTCGACTTTGTAGCGT 3137454 28 100.0 32 ............................ AGGAGGTTCTGGTCCGTCGCCCAGTTCCCGGT 3137394 28 100.0 32 ............................ TCGCCCGTCACGGAGCCCGCCGCCTTGGTCAC 3137334 28 100.0 32 ............................ AGAATGGACTGCCGAGCGCCGGCCGCCAGTTG 3137274 28 100.0 32 ............................ CGGCATTGCTGAATGCCATAGCGGATCTGCTC 3137214 28 100.0 32 ............................ GGCATCCCCGAGCGCAAGCTTCCATCCCCGCC 3137154 28 100.0 32 ............................ AGCGGCCTGGACCTGGTTCGGCCCGTCCAGGC 3137094 28 100.0 32 ............................ CAGAAGCGCCGGCCGTTGGCGAAGAACCAGTA 3137034 28 100.0 32 ............................ GATACCTGACGGCCTGGTGCTGGATCACCTGT 3136974 28 100.0 32 ............................ TGTCCTTTCAACTCGGTCTGCTCGTAGAGGTT 3136914 28 100.0 32 ............................ TTGAGAAGCCGCGGGTGTCTAAGAAACTGGTA 3136854 28 100.0 32 ............................ AAGACGTGGCAGGCGGCCTACAACCACGACGA 3136794 28 100.0 32 ............................ TGACTGCGGGGCTGCACGACATAGTCGTCGAC 3136734 28 100.0 32 ............................ GTATGAAGTGTGTTACCGCGTGGGCGATTCCT 3136674 28 100.0 32 ............................ TCGTAGTGGCCCCACGTCGGCGGTAGCTCGCC 3136614 28 96.4 0 ...........A................ | ========== ====== ====== ====== ============================ ================================ ================== 39 28 99.9 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCACCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTACCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //