Array 1 218942-220969 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYHF010000009.1 Pseudomonas sp. MBT-4 PS59_contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 218942 32 100.0 33 ................................ ATTGCACGGTCTAAAATGTCAGACATGAGTATA 219007 32 100.0 40 ................................ ACCCAAGATGCCCGAGCGCCGTCAAGGAGTTTCAGCGCTA 219079 32 100.0 33 ................................ CGCACCGCTAAACGGAGCCTGTAATTATGACCG 219144 32 100.0 35 ................................ CGCTCGGTCGACGCGGATACCTTTGACGGGGTGGA 219211 32 100.0 35 ................................ AACAGCGGCAACACCCAAGCCCGCAGCCGTTACGG 219278 32 100.0 34 ................................ ATTGCAGCAAGCAGCTTGTGCATGTGCTTGTCTG 219344 32 100.0 34 ................................ GCCCGGTCGACGAAGATCTGCAGCATAAAGTCGG 219410 32 100.0 33 ................................ TACTGTAGTCGTCACCGTCAGGGTTAGCCCCAC 219475 32 100.0 35 ................................ GTAGCTGACGTTTTGCGAAGCGCCGGCCGGTGCGA 219542 32 100.0 34 ................................ GGTGGCGTAAGCTGCCGTGAACGCCCTGGGCATA 219608 32 100.0 36 ................................ GGTCTCGAAGGTGTAAGCCCAGCGCCGGTATTTCGT 219676 32 100.0 35 ................................ CAGTCCCAAGTTGATAAGTCGGCGGGGTTAGGTTT 219743 32 100.0 33 ................................ GCCACCTGCAGGATATTGGCCAGATCGACCCAA 219808 32 100.0 36 ................................ ATGGCCTCCTTGGCAATGAGCGCCTGCACATCTATG 219876 32 100.0 35 ................................ GTCCTGCACACCGACCACCTAGCCGAGCTGAAATC 219943 32 100.0 34 ................................ CAGACATGGTAAGTAGCTAGTGTCCCGTCGCACG 220009 32 100.0 33 ................................ GCCCCTAAAGAGGTCTCTAGTGGCGAGGCAGAC 220074 32 100.0 34 ................................ ACAGCGATAGGCTTAGGGTAGATGCTGATCGAAG 220140 32 100.0 34 ................................ TGAGCGGGTAATGTTTAACCTTGGCGTCAATAGT 220206 32 100.0 33 ................................ GCTGGCAACAAGCCGTTCACCCAGGGTATCGAA 220271 32 100.0 35 ................................ GCCTAGTTCGCGCATCCATGCCGCAGTGCACAGAC 220338 32 100.0 36 ................................ CCTTTCACGAATGCGCACGCCGTAGATAGCGGCGCT 220406 32 100.0 34 ................................ GTCACCTCGACGGAATGCCTTGACGGCGGGACCG 220472 32 100.0 35 ................................ TCTTATCTGCTTGCGGAGTGTTGAGCAGGCCGGTT 220539 32 100.0 33 ................................ AGCGGAGATATGGTGACACCGGGCGAGGTATCG 220604 32 100.0 36 ................................ TAGACCTGCCGTCGCGGTCAAAGACCATGAAAGAAA 220672 32 100.0 34 ................................ GCCAAAATTGGTAATTGGTTGGTCGTTTAGAATC 220738 32 100.0 35 ................................ ATAACGCCAGGAACTGACATTTACGACGACACCTC 220805 32 100.0 34 ................................ TGGAAAAAGCGCGGCATTGAGTCCGGTCGCCAGC 220871 32 100.0 35 ................................ ACGGTGATAACGGCTGTGCAGTGGCGCGGGCTGAT 220938 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 31 32 100.0 35 GTCGCGCCCCACGCGGGCGCGCGGATTGAAAC # Left flank : TCCGCCGTTCCTCTGGAAGTGAGGTAGGGCCATGATGGTTCTGGTCAGTTACGACGTCAGCACGCTGGAAGCTGGCGGCGCGCGACGCTTGCGGCGGCTGGCTAAAGCCTGCCTCGATTATGGCCAGCGCGTGCAGTATTCCGTTTTTGAGATTGAGGTAGATTCGGCGCAGTGGACGTTCCTCAAGCAACGCCTCTGTGGCTTGATTGACCCTGAACAAGACAGCCTGCGTTTTTATTACATGGGCAAAAACTGGCAAAGCAAGGTTGAGCACATTGGTGCAAAGGCAGTGCTAGACCTCAACGGCCCACTCATCCTTTAGTCTTTTGCGAACCCCGAACGACCGGCTAATCCAGGGTAGGTTCGCTGCTCTTTAACATACTGATTTAATTGAATTCATTTTTAATGTTGAAGGCCTTTGATGCTGCTCGCACCAGTTAAGGGGAGGTTCGCATTTTTGGGTGTTTTCCTTATAGCTGACGCTAGGTTATAAGGGGGAG # Right flank : CACCCTAAGCTGTTGGCGCTGATTGAAAAGTGACCCACCCTGCCGATTGAAATTTGACCCAGGGCTGGTTGCTGTTTTTTGCATCAGCAACTGTGGATAAGTCTAGCAGCCGAGCTGCTTTTGAACGCTTCCTTTTCGATAGCCCAGTGCAACGAATGAAGGTCTGTTACAGGCATAGTCCGCAACAGACCTTCCCATCCGTGAAGTCAAAACGGCTCGTCGATCACCTCGTCTTTGCCTCCCCGGCGCTTTTGCTCACCCGCACGCGCCCATTCCGCCTTGATCAACTCTCCAGCGGATTCGACCACATCGATAACCGGGGTTAATAGCTGTGGAAGATTTACGTCACTCATCTGAGTCGATCCGCTTTCCCTGCTTGTCTGACTGCTCACGATCCCAGTGCTCGATTAACTCATCAATACGATCGGGGATACGCGGAGTTTTGGAAAGAAGCAGTGCACGGGTAGTGCCAACGAACTCCTCAATTAGGTAAAGCGAGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.90,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //