Array 1 402881-405528 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027663.1 Acidiferrobacter sp. SPIII_3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 402881 36 100.0 34 .................................... CCTGCACGTAGCGGAATTCGCGCAGGTTCAGGAC 402951 36 100.0 33 .................................... CGAGCCATAGCCAGAGGCGGCAAGCTGCGAGCC 403020 36 100.0 31 .................................... CGACAAGTGCTGCCACATCCGCAGGCGGCGA 403087 36 100.0 34 .................................... TCAAATCCTCCATCAAAGGCATCCCAGAAGTAGC 403157 36 100.0 32 .................................... TATCTCGCATGGCGCACTCCTGGGTCGGCGTG 403225 36 100.0 33 .................................... CCAGCCGGGAGCCGTAGCCCGAGGCCGCAAGCT 403294 36 100.0 33 .................................... GTCATTTGTGGCTCCAGTCGGTCGATTGGCGAC 403363 36 100.0 32 .................................... TGGCGTTCGGCGTAGACGCGCACGCCCGGGAT 403431 36 100.0 32 .................................... GGAACTGCGCGCGGAAACTCTGCCAAGCGGCA 403499 36 100.0 32 .................................... TGTTGGTGATCGCGGTTCCAGATGGCAGGTAG 403567 36 100.0 34 .................................... GCGCAGCGGTTGGCGAAGTCGAGGAGACCGGCTG 403637 36 100.0 33 .................................... CCATTATTCGCCTCAATCTCGGCCAGCAGATCG 403706 36 100.0 33 .................................... CAGTTGCCCGCGCCGCACAGCGCTCCGCAAATG 403775 36 100.0 32 .................................... TATTTCGGCCGTGCCCATCATCCCAAATCGAG 403843 36 100.0 32 .................................... GCCGGAGGTTATAGGCATGGTCGATTTGAGAA 403911 36 100.0 33 .................................... GCGGCGGCGCGGGCGGCGGCGTCGGCGCGGGCG 403980 36 100.0 33 .................................... GGCGCCGGCGGCGTCGGCGGCGCGGGCGGCGGC 404049 36 100.0 33 .................................... GGATGTCATTTCGACTCCTCTGAAAAGATTTCT 404118 36 100.0 33 .................................... TCGTCCGGCACCCCATATTTCTTGAGGGTCGTG 404187 36 100.0 32 .................................... CAAGCCCTCGGCTGTGCCCGTAGGATGCGCGG 404255 36 100.0 32 .................................... CTCTGCGAAGTCGAGGAGACCTGCGCGATTGT 404323 36 100.0 33 .................................... GTACTCATGAGCCCGGGTCGCACAGCGGTTGGC 404392 36 100.0 32 .................................... ATGGCCTCAATTGTGCCTGCCTGAGCCATAGT 404460 36 100.0 33 .................................... CGGCGTATTCACGGTGATATCATAAGGCGCCGT 404529 36 100.0 33 .................................... CGGCGTATTCACGGTGATATCATAAGGCGCCGT 404598 36 100.0 32 .................................... ACCGCTTCCTCGCGAACCACATCATCACGCCC 404666 36 100.0 34 .................................... TCGTATAATAACGGGTATCGCGCCGAAATTGAAA 404736 36 100.0 33 .................................... CACATCCTCGATGACAATCGTCGACGCGGTCCG 404805 36 100.0 33 .................................... GCTCCTTTCCCCCCTCAGCCGCAAACATTCGTT 404874 36 100.0 26 .................................... GCGGCGTAGGCAGCGGCGTAGGCGGC Deletion [404936] 404936 36 100.0 33 .................................... AAGCTCATTTTGTCAATAGCTTCTTGCGGGTCG 405005 36 100.0 35 .................................... GGCACATGCCCGTGCAAAGCGGGCTTTGTCCGCGG 405076 36 100.0 35 .................................... GCGCGCTCGGCGGCGTAGGCGTCGGCGGCGGCGTC 405147 36 100.0 33 .................................... GTCTTCGGCGGCGGCGGCGTCGTAGGCGGCGGC 405216 36 100.0 32 .................................... CGACGCGACGTTCTCTTTGAACTTCACATAAA 405284 36 100.0 32 .................................... TCGACGCGACGTTTTCTTCGATCACTAGATAT 405352 36 100.0 34 .................................... GGCGCGGGCGGCGGCAATATTGGCATCCGCCACG 405422 36 100.0 33 .................................... GCGGGCTTTATCCGCGGGACGACCTGGGATTGA 405491 36 97.2 0 .................................T.. | G,C [405521,405525] ========== ====== ====== ====== ==================================== =================================== ================== 39 36 99.9 33 ATTGAACGATTGACCTGATGAAGAAGGGATTAAGAC # Left flank : CTGCGGCGGTTACACAAAACTTTATCCGAGCGACTAGAGCAATGGCATTAAACGCGCGCAGATCCTGGCTCATCGCCTATGATATCGCCGATCCCGGCCGCCTGAACCGTGTCCACCGCTACCTAAAGGGCGAAGCGGTGCCTATTCAGTACTCGATTTTTGCAACCAACGCCAGCGCTAATGGCATCCGCCGCGTCCACGATGCCCTGGCAATGCAGATCGACCCACGGCGAGACGATGTCCGTATTTACCTTTTGCCTCAGTCGTTAGACATATCCGGGATCGGCTCGTCATTTTTGCCAGAAGGCCTCCTATTGCCAAATCATGCTTCTTTGGCTTAAATAATCTGCGAGCCGCTGCGTCAACGGTGTACGTATAGCATGACGCGGGGCCCAATGACGCCAGGAGACCTCTTCTGGCAAGGAAGATGCGATGCACACGAAAATCCTGGGAGAGCCATTTATAACAACTGGAATAAAAAGGAGAAATACCGATACGCG # Right flank : CTCACCCGGTTCCGCGTAAAGCTCCCCGGAAAGGGCCATCTGAATGGCGACGAGCGGATTGTATCCGCGGTTGGCCATGGTCTGTAGATAGCTAGAGATGCGGCAGTAAGCTTCGGCGTACTCGACCTTGCGGAAGCAGCCAGAGACCTTTTGTTTGACCTTGCTCATGCGCAGATCGCGTTCGGCGCGGTTATTCGTGAACGGGACGTTCGCGTCGCGGGCGAATAGCAGCACGGCGGTTTCGTGCTCCTTCAGTCGCTCCCAGAGGTTGTGAGCGTCGGACTTGGCGATGCGACCGCGTTGGCCGTTGGGCCGGGCCGGGATGGGCGGCAGTTCTTGCGCGCCGCGGGTGAGGATATTGCGGTAGCGCTTCTGCAGGGCGTCGTACTCGCGTGGGGTGAGCCGTTTGCGCTGGCGCTGGGAGACACGGTGGCAGGTCTGCCGCAGGAGCCGCCTCATGTTCCTCGCCCAGGCGTAACCGTTGGACTCATAGATGAAGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACGATTGACCTGATGAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 580847-581212 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027663.1 Acidiferrobacter sp. SPIII_3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 580847 36 100.0 30 .................................... TCAACGCTAAGGCGTTTGCCAATCACGAAG 580913 36 100.0 30 .................................... CGCCGCGGGGAGCATCTCCTGCGAAAGCAG 580979 36 100.0 30 .................................... CTACTCTTACTACATGCACTGGGGGGATGT 581045 36 100.0 30 .................................... TTGAGATCGAGCGCAGCGCCCCCGGCACTG 581111 36 100.0 30 .................................... TTACCAGAGGGCGGCACACCGCCCGCAGCG 581177 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 AGTATACATCGTCGGGATATGAGCGCTGGCCGGAAC # Left flank : TTCCATCGGTCCTCCGAAGCCCTGGAGGCCCCTTAGGTGCCCATTGTAATTGGGGGGCGCCGGCAGGTCGACGCACGCCGTAACATCCGATTAGGTCGAACTTCGTGGACCTACGGGGCCGGTCTTTGGCGATTTCAGGACCAGGCGGTGCCGCCCACACGTCGCATAGGCTGGTAATTGCACCTCGCTCCTGGTGGCTTCGCGACGGAGCTACGGTCAACCTCCGCCGAGCGGCCATAAACCATCTGAAACCATGACCGCCAGTTAAAGTTCCGCGTTGCTAGGCTGGCCATCGCCTCAAAAGCCCTGAGTCATTGGCCAGCCGCGCACCCGGACCGTTCGACAGAGAAAAAGTAGCGCACCTATGAGTCCTGGTCCCCCGTAAAATTCGAGGCAGATCTTATGGCTATAGCGTCGACCATCAATAAGTGGTCGGTCTTCGTGGAATGTCCTGGGTTGGCTGCGGCTACAATAAGGCAAAAAAACTATGCATCCGGTAA # Right flank : CCGTAGGTCAAGTCCTCCGAATAAACAGGCGCGCTCAGGCGACTACAGGCAAAAGATCCAGCACTTCGGTCAGCGCGGTATCCACCCGCGCCAGGAACTCAGGGGCACACTGCAAGAGCGGACCCTCAGTCAGGCGGCGATTGTCGATGGCGCGAAGCTGGTCTAGGAGCAGATCAGAGTCCCTCTTCAGCCGGCCTTGTGCCGGCAGACGCAGGCGTAAGGGCTCCGCGTTGTCGGTAAGGCGGGTGGTTAAGGGAATAACAAGCGTGGAGGGGTGCTCGGCATCCAGCAATGCTTGGCTTTGGACGATCAGAACTGGGTGTATCTTGCCCGGTTCGGTGCCACGTCCCGGATTGAGATTGGCGAGCCAGACACTGCCGCGCTTACGCATCCGGTGCGTCTTCGATGACGTCAAATTCGGCGTTGACGCGCATGCTCTCGCCACATACTCGCCGGGAAACCTCCATCATGCGCCGACGGCGCTGTTCAGTGCTGAGCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTATACATCGTCGGGATATGAGCGCTGGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //