Array 1 18698-20617 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJZ01000014.1 Prevotella maculosa DSM 19339 = JCM 15638, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 18698 29 100.0 36 ............................. TATCTGATAATGTGTAGCGTACCACGCAAAGTCAAG 18763 29 100.0 35 ............................. TAACTGTTGTAGCAACCGTATCTGCCTGCAAATAA 18827 29 100.0 35 ............................. TTTGAGCAAGTCGAAAGCAGTTCCCGCGCCGTCGG 18891 29 100.0 36 ............................. TAACGACTTATACCCGATAGCTGGGCCTTTAGAAGC 18956 29 100.0 35 ............................. TACACGCAAATTGATATTCTTATTACGATAACCGG 19020 29 100.0 34 ............................. TAAATAATCCGAATAACTGCATAAAGGTACGTGA 19083 29 100.0 36 ............................. TGATTTAATATTTGGTGAATATATTACTGGTAAAGA 19148 29 100.0 35 ............................. TAAAGTATCGGCATCGTCATATTGTGATATCTTAA 19212 29 100.0 35 ............................. TTTAGTTAAAACAGGATTCAATTTTTCAAAACTAT 19276 29 100.0 39 ............................. TATACTAAGGACAGATATAACTTTTCAGAATTAGCTACT 19344 29 100.0 35 ............................. TAAGGAGAAGCGGGAGGCTATGACAGAGGATGAGC 19408 29 100.0 37 ............................. TTAGCTAATGAGAAATTTGAAAATGCGAAAATTGATT 19474 29 100.0 39 ............................. TTTGTAGATATTAAGTGTGCGGGTCGGTTCAAAACGTTC 19542 29 100.0 38 ............................. TCTGGAGTATTAATATACATAGCTTAGGCTTTTATTAC 19609 29 100.0 36 ............................. TGAATTTATTAGTAAGGAGGAATATACTAAAGTAAA 19674 29 100.0 36 ............................. TACGCGAACAAATTACGAATTTGAGCAGCAGAAAGA 19739 29 100.0 35 ............................. TTATTGTTTACTCAAAGCGTCCCAATTGAGCAAAG 19803 29 100.0 37 ............................. TGAAATAAAACTATCCCAATAAGAATACAAGTACTTA 19869 29 100.0 36 ............................. CAAATGAATTGCCTCGATAATTAGAAGAAAAATATC 19934 29 100.0 37 ............................. CGAAGTTTTTGAAGCGTCTTCGTAAAAATCTGTCTTC 20000 29 100.0 34 ............................. CAGATGTTATATTTTTGTGTGTAAGTGTGTGTGC 20063 29 100.0 39 ............................. CGGTAAATGCTTAACAGTAGTCTTTCGTTCCTGTGTTAT 20131 29 100.0 37 ............................. CATAGCCTCTGCGCATATGTCTTTTTGCTCTTCAGAG 20197 29 100.0 36 ............................. CGTGTCAGAATGTAGTAGACAAATCCAGCGACCTTA 20262 29 100.0 38 ............................. CGACTGATGGACCCGTCCTCTGCAGGATTGAAACCATC 20329 29 100.0 35 ............................. CAAAAGTGGTGTCAGTTCTCATATAATTGTCAAGG 20393 29 100.0 35 ............................. CTCTATTGATGCTGATTTATAGATATGATAGATAA 20457 29 100.0 39 ............................. CACAGTAAAGAGTACATCATTTGCGCAGCTATTAAGAAA 20525 29 100.0 35 ............................. CCACCTATCAGAACCGCACCGGGAACTTGGAGAAG 20589 29 93.1 0 .......................C.A... | ========== ====== ====== ====== ============================= ======================================= ================== 30 29 99.8 36 GTTCTAATTGTACCTTAGTGGAATTGAAA # Left flank : ACCTTTTAAGATGTATTGGTAATTGTATGTGTGTTATCCTGATTTATGATGTGGCAGAGAAGCGTGTTAGTAAAATGCTGAAATTGTGTCGGCAATATCTTTGTTGGATACAGAATTCTGTGTTTGAAGGCGAACTGTCAGAAGTTAAACTACGAGAGTTGCAATATAAGATAGGAAACTTAATTGATAAAAAAGAGGATAGTGTGATAATATTCTCCAATAAAATGGGTTATCATATGAGTAAGGATATTCTTGGCAAGGAGCGGATGTCAACAGAGAACTTTCTGTAAAGTTGTCGATGTGGTAATAAGATTATTTATAGTGTCTTCTAATATAATAGAGTCGCTCTTTGACTTCTTGAAACATATTACAGCAAAAGATATGTCGAAGCCCAACGGAAAATGTATTTTTAGGTATCGACATTTTTTGCTCTTTTTTTAGTACCTTTGTATCGTAGTAAACGGTTTATATATCGACCTTCTCATTTTCTAGAATGATGG # Right flank : AATTTCTTTAGTGGAGAAACCAGGCCATTCCTACACCGAGATTTACATATTTAAAAGGCTCGTTAAAGCAGATGTCGTTATACATGTTTAGCTGCAATCGCGGTGTGACGATATAAGAAACGCCCGTTTCACCCATACAGTTGAAGTGGCTTCTATGACCGGGTCTGGCCCAGTCCTCCTGCTTTTCAGAATTGAAGCGATTATAACTTTCTATGAAAAAGCACCACCTATCCGTAGGCTGGAAGTTCAGACCCGGCACCGAAAAATATATCCGGACGATGCGTCTCACTACTCCATTCCACCCCAATATCATAGCCTATACTGAAAAATTCCGTTATATTATTTTCAAACAACAGGTGGGATTGAACGCCGATATGCTTGGGGAGATAATGAGATTGACTGCTTCCGGGAAGGAGAATTGTCCCAAGGAAGGCTGTTTTCGGCAGGCCTTTCGACCCTTCAAACACTTTTATCTTTGTCCCGACAGATGCATTGGATAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATTGTACCTTAGTGGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 14319-14714 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAJZ01000053.1 Prevotella maculosa DSM 19339 = JCM 15638, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 14319 37 100.0 33 ..................................... GCCCGACAGCAACACCATCAAAGCCTTTGGGTT 14389 37 100.0 33 ..................................... AAGCGTAAGATAGACATTGAAATGGTCGGTGTC 14459 37 100.0 33 ..................................... GATTAACTTCAGCATTTATTGTTGTCTTATTTT 14529 37 100.0 37 ..................................... TTTCTTTGTTGCCATAATTTTGTAATTTTTAAGGGGT 14603 37 100.0 37 ..................................... ACCGAAGCACCATGTCGTTTCAAAAGGCAACCTGCCT 14677 37 94.6 0 .....................A.............G. | T [14702] ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 99.1 35 CTCTGTGAGTATCTTCCATTAGAACAAGGATTAAGAC # Left flank : AAACAAACCAATAAGACCAGCAACAAATATGTTGTTCTTTGTGATGTATGACATTGAAAGTAATAAGGTGCGCTATCTTATCGCCAAATATCTTGAGCGGCATGGGTGTACCCGTATTCAACGTTCTATCTTTCTTGCCGACCTCGACAAAGCCATATATGATCAAATTAAAGCTGACCTCACTGAGGTGCAGTCTCTCTATGATAATCATGACAGTATCATTGTGTGTCCGATTTCTACCGATCAGCTTCGTGCCATGAAGATTATTGGTTTAGACATTGCCGTCGATGTGATAACGCGTTCTCGGAATACATTGTTCTTTTGAATTAGCATTGCAGCCTTTTGATAAGGAATATTTAACATCATGCTCTTTGGCTTCTTGAATAAAATTATTACCTTTGCACCCGTTTCTCAAGCGGTTAATTTCTGTTAAGGACGGACGAGTATATTGTCTTATACTTATTGAGTTGCTTTATTTATAAGGATACCAAGTCTTTACT # Right flank : ACAGCATAGGTTTGGGATACTATACCATCAGTAACTCCCCTACTTTTCTACTTCGCGGAGCATGTGAAACTACTTCACGGAGCACGCGAAACAATTCCAGCCATATTAGGCGCTAATCTCAGCCATATTGCGTGGTAATATGGCTGAGATTAGAGCGCAATATGGCTGAGATTACGCGACGTGTCGGTCGCGCCGGCACGACGTGACTGGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTGTGAGTATCTTCCATTAGAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //