Array 1 745417-742240 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 745416 29 100.0 37 ............................. ATTTCTTCTAACAGAGTATACATAGGATACTGTTCAG 745350 29 100.0 37 ............................. TTTTAGTTAGGGGATATAGATGAGAGCTAACTGGTAC 745284 29 100.0 36 ............................. TATGTAAAAAGCAAAACTACTGCAGAACAGTATAAG 745219 29 100.0 37 ............................. TTAAAAGAGCAAAGCAGAGGTGTTGTTGTAGCAAAAG 745153 29 100.0 38 ............................. CAATGGCTTTTCTGGACTATTATTAGTAGAATAATTGA 745086 29 100.0 36 ............................. TTTTAAGATATTCTGCCTCAATAAAAAACTGTTCCC 745021 29 100.0 36 ............................. TAGCGGATGTCGCAGGAATAGAAATGAATGATATAG 744956 29 100.0 37 ............................. GCATTAAAGCAGAATGAAGAAAAGATTAAAAGAATAG 744890 29 100.0 37 ............................. TACATTTTTCATATCTTTTTTAGTAAAAACAAAATCT 744824 29 100.0 35 ............................. GTATTTTTAATTGTTACAATACAACCCCAAGCATA 744760 29 100.0 35 ............................. GCTGTTTTGGTTTTTGATTTATTGGTTCTGTATCA 744696 29 100.0 36 ............................. TGAAATTTCTATACAGTGGTCTTGATTTAAAGTGCA 744631 29 100.0 38 ............................. GCATTACTACTTGTCTGCTCTTGAAGTTGGTTTATCTC 744564 29 100.0 36 ............................. TGTGTATGGGGTTATTTATGAAGAATGAGGGGGTAA 744499 29 100.0 36 ............................. ATATTGAGGTCTTGAAACTCTTACTATTGTTAAACA 744434 29 100.0 37 ............................. TAGACTAGAAAGGAGATGATAAGATGGATAGAACAAA 744368 29 100.0 35 ............................. GCGGCATACAATCGATTAGACAGAACGACTTCGAA 744304 29 100.0 36 ............................. AGAAGAAGGGTGTATTTTTATGCAGAAATGAGGTGT 744239 29 100.0 38 ............................. TCAGAAAAATACAACAAAACTACTACACAATATAACTA 744172 29 100.0 36 ............................. TTTGAGTTACCGAGGGTGTATGTGCTGCCTTCGGCT 744107 29 100.0 37 ............................. GCGGTTTGAACTGTTGTTCCAACAGGTATACGCTCTC 744041 29 100.0 35 ............................. GGCGCACACACACTTGTTTTATATTAACTATGTGG 743977 29 100.0 36 ............................. CATTATGTCAAGCATCAGGTAAGGGAATACCGATAG 743912 29 100.0 39 ............................. CCGGATTTTGAGTACATAAAATAGATAATTTGAACTCTG 743844 29 100.0 38 ............................. CATAATTAAGTCTAGTTGTTGCTGACAGTCGTTTTGTG 743777 29 100.0 37 ............................. TTTTACATAGTTAGGGTCATTCTTCATTAATACTTCG 743711 29 100.0 35 ............................. TCTTTTTGAAAAATTTTTTTTAAAAAATCGTTCGA 743647 29 100.0 36 ............................. CAAATCTCACATAATCCTTGTGATCTTTCCAATACT 743582 29 100.0 36 ............................. TAAATTCCCCACTCCCCAGTGGCGAAAAGGCAGTCG 743517 29 100.0 37 ............................. TATATTCTTATAATCTTCTGATATGTAGGTAAATCTG 743451 29 100.0 37 ............................. TACTAATATTGATATTGACGACACAAATAGCGGTAAA 743385 29 100.0 36 ............................. TTTTACTGGGACGGTAGTACAAGCGTTGAAATAGAA 743320 29 100.0 36 ............................. GGTATACCGATACGTCGCTTCACAGTGGCACAGTAA 743255 29 100.0 36 ............................. TTTTATGTAAAAAATAAAGGTAGTATGTGTAACATA 743190 29 100.0 38 ............................. ATACAAATAAGCACGGATACAACGACTGTAAAGCCCCC 743123 29 100.0 36 ............................. GGTATACCGATACGTCGCTTCACAGTGGCACAGTAA 743058 29 100.0 36 ............................. TTTTATGTAAAAAATAAAGGTAGTATGTGTAACATA 742993 29 100.0 37 ............................. TAAGCTCTTTAAAATAACCATCATTTCTCTTAACAAC 742927 29 100.0 37 ............................. GCGGTAGTGAAGAAGGAACAGGGGACTCTTTTGGAGA 742861 29 100.0 38 ............................. AGATGTTGACTGAAGTCAGTCAGCAAAGAAAACAAAGG 742794 29 100.0 37 ............................. GGATCCTAGAAGTGATAATTTGATAAAAGCTCTTAAA 742728 29 100.0 37 ............................. TTTTATTTATATTTTATCTTTTTTATTTTAGTTTTAT 742662 29 100.0 37 ............................. ATGATGGAAATGTATTTGTATATAAAGAACGATTTAG 742596 29 100.0 37 ............................. GAAGACACTCTAGCAGCTATTTATAATATTAGATACG 742530 29 100.0 36 ............................. TTGAATATAACTGTTCTAACAAAGTATCTATCAGCA 742465 29 100.0 36 ............................. ACAATAATTCAAGCAGAGGTGGTATAAATGAAAATA 742400 29 100.0 36 ............................. TGTCTTGGAGGCATATTAATGATTAAAACCTCATCA 742335 29 100.0 37 ............................. CTACCAGTCGCAATTCTACCATCGTATATAGTTCCAC 742269 28 79.3 0 ................AAA-...AC.... | T,C [742243,742248] ========== ====== ====== ====== ============================= ======================================= ================== 49 29 99.6 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : AGAATTCGAAGATTTTATAAATAATTTTTAAACAGTATTATTAGGATTTCAAGAACATTTTTCCAGTTCTGAAAAAAGTATATAATAATTAATCCAATTCTAAAAGTTTGATTTATTAGTATAATAAAATTATAGGCATTTTTAAATTTTGGCAAATAATACATTTAATAGATTTATTTTTGAAATTATTTGTTTTAGAAGTTTTATTTCAATTGTAATTTTTAGTATAATAATAGAATAGATGGTTGTATTTTAGTTAATGAGTTTTTAGAAGTATTTTAAATTTTTTATTTACTATAATTAGAAAAATTTCACAGCTGCAGTAAAGTGGACTTTAATTAAAAGATTGTGAATTCCATGAAATATCTTAATTAGAGGGCTTTAAGTTTATATTTTAGAAAACATTATTATAGCTTTACTGCAGAAATACATATTATGATTGAAATCAAATACGTTGTAAGCCTTTAAATTTCCTATAAATAGTTATTAAAAAAATAGGG # Right flank : TGATTTTTTTAGAATTAAAAAATTAAGCATAAGCGACAATTTATTAAAAATGAAATTTTAAATTATTAGATGAGTTAGGAACATGAATTTGAGATAAAGTCATTTTTAAATTTTGCTTTTTATTGAAATTTAATTTTAGAAACAGAAATTGTATTTGTCAACTGAAAATTCCCCCAAATTTTAATCGAAAAGTATACCACTAATGAAAAAAATTAATTAGATTTACCTAACCATTCTATAGTCTCTTTCATTCTGTAAGAGTCTCCATTCATATTAATGACATATGATTTATGAGTAAGTCTATCTATTAATGCAGCTGTTAATACAGGATCTTTAAAAACTTCTTTCCATCTATCAAAAGAAAGATTAGTTGTGATAATTGTTGATTTCCTTTCAGCTCGAAGAGAAAGAAATGTAAATAATAGTTCACTCCCTTCTTTGTCAAATGAGATATATCCTAATTCATCTGCAATAATTAGGTCATACTTTTCAAATTTCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1340727-1340039 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1340726 29 82.8 40 AAAAG........................ TAGAAATAGAGTAGGAAAGGAATACCAAGACATAAAAGAA 1340657 29 100.0 36 ............................. AATAAATGTATGATGATTGGACTTCTTGATGAGATA 1340592 29 100.0 37 ............................. TTTCTACAAAATCTTTTAAATCGTAAAAAGTTAGCCA 1340526 29 96.6 38 ...C......................... TCGTCAAACTCTGCTTTTATATCTTTTAATAACTTCAC 1340459 29 96.6 37 ............................A TTTAAATCACCCCTACCATCTATATAAATTAAATCCT 1340393 29 100.0 37 ............................. TGCACAAAAATATCTATCAGAAAATCCAACTCTTCCA 1340327 29 100.0 35 ............................. TCATATACTTTTCTAATATAATCTAATTCTTCAAG 1340263 29 100.0 37 ............................. AAGTTAAAGGCTATTCAAGAAGATTTACCATTCAGAG 1340197 29 100.0 36 ............................. TTAGTTCATCATCATTTAAAGAACTTTTATAAAACT 1340132 29 100.0 37 ............................. GGTCCTGCACGGCAGGTAATAGAGTGGTTTAAAACAA 1340066 28 86.2 0 ................A..-.....G..G | ========== ====== ====== ====== ============================= ======================================== ================== 11 29 96.6 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : ATGTGTATTTCTATTAGTTTTATTTTGATGATAATACCAAGTAGAACGATTAATACCTATTATTTTAAGAACTAAAGAAACTTTATAACCTTTAGATATCCATTTTTCTGCGATATCTAATCTATCTTTAAGTCTTGGTTTGTTTTTTTTAAAAGATCACGAAGAATTTGTATTTCAAGTTCTTTTTCACCTAAAAGTTTCTTTAGTTGTTCATTTTCTTTTTCTAGTATCTGAGACTTAACATCTTTATTAGTAGTTTTGGAAGTTTGTTTAGAAACTGTTGTTTTTCCATATTTTTTATAGTTATTTATCCATCTTGATGAGGTAACTGGATGAATATCATGACGTCTTGCTACTATACCTTGTTCACCAGTTTCTAAGGCTTCTTTAACTACTTTAACTCTAAATTCTTCAGTGAGTTGTTTTTTTGGCACTTAAATTCACCCCCTAAATTTATTATATTTCTATGGTTAATTTTGTCCAAATCTATTAGGGGGCTA # Right flank : TTTAATCTTATCAAATTAGATTGAGGTGGTGATTAAAGTGGAAAAAATAAAATCTGTTCAATTGTTAATTAATCAATTTTCTTTAATTATTGCGACAATATTTTTTGTTGTTTCATGTTTGTATAAAAATTTTTGGCTCATTTTAATAGGACTTGGGTTAATCTTATATACTTCTGATAAGATAAAAAAATCAAAGGAGAAATAATTATAAAACGTGAGGAATTAATTAAACTAATTCAAAAAGAAACAATAAATTCAAAAGAAATAATAAATTATTTAGGTATCAGCAAACAATGTTTATCAAATTTAAATAATTCTGATAAATTTATTGCTGTCAGAAAAGAGACTTATTTAATGTAAAAGATTATGAAATTAAAGTTACTGTGTTGCCTTTTTATCCTTTGTGTAGAACAGGTATTGCTTTATATTTTGAAGATGACTATGGACAAGAGGTAAGGATGGGAACTTTATCATGTTCCAAGTGATATGAAGTACAAGGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 1342655-1342099 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1342654 29 100.0 40 ............................. ATGATTGTCAATATGAAGAAGCCTAGTAGGGCAATTAGTA 1342585 29 100.0 37 ............................. GCACACTTCACACTTGTTTTATATTAACTATGTGGAA 1342519 29 100.0 36 ............................. GTCGTACGATATGATTGCAAAATTGAAGAAGTAGAT 1342454 29 100.0 38 ............................. TACAGCCGAGATGAATATAAAGAATGTCATGATATATC 1342387 29 100.0 36 ............................. CAAAGTTATGGATATACAATAATTAAATATAATGAC 1342322 29 100.0 36 ............................. TTTTTTACCTATTAATTGTTTTAATCTGCTTTAAAA 1342257 29 100.0 36 ............................. GTTATATGGAATTAAAGCTAATAAAATATGACTTTT 1342192 29 100.0 36 ............................. TTGCATCACCGACACCTGTTACCTCTTTAGCCCAAT 1342127 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 9 29 100.0 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : ATCCAGGGACAGGAAAAACACATATTTCAATAGGGCTTGGTATCGAAGCTTGTAATGCTGGATATAAAGTATTTTTCACTACAGTACCGCTCCTTATCAACGAACTTAAGGAGTCGCGTAGCGAAAAAAGATTACGCTCTTTTGAGAAGAAATTTGAAAAGTATGACCTAATTATTGCAGATGAATTAGGATATATCTCATTTGACAAAGAAGGGAGTGAACTATTATTTACATTTCTTTCTCTTCGAGCTGAAAGGAAATCAACAATTATCACAACTAATCTTTCTTTTGATAGATGGAAAGAAGTTTTTAAAGATCCTGTATTAACAGCTGCATTAATAGATAGACTTACTCATAAATCATATGTCATTAATATGAATGGAGACTCTTACAGAATGAAAGAGACTATAGAATGGTTAGGTAAATCTAATTAATTTTTTTCATTAGTGGTATACTTTTCGATTAAAATTTGGGGGAATTTTCAGTTGACAAATACACAT # Right flank : TTGCTAATTTCATAAGATGATTTAACTTGAGTTCGGTTTGACCCCTTAAATTTGGACAATTAAACTCTAACAACTAACTTTTTCTTAATATTGCTTGAGTTTTCTCTATAAAATTCCATAGGTGTCATATAACCAATAGCTGAATGAATTCTTGTATTATTATAGTAATCAATATATTTCACAACTTCTTTATAAGCTTCTTTGAAACTTGTAAAACTAAAATATCTTAAGCATTCATTCTGAAGCAGGTTATGAAAAGATTCAATATGAGCATTCTTATTTGGTGTCTTAACAGGAATTTGCTCATGATGCATATTAAGTTTTTCACAAGTATATTTGAATATATTGCTTACAAATTGTGAACCATTGTCAGTACGTATAATTGGCTTAGTTTTACTAGATAACAAATTTCTTTTTATCAATGCATTTATCAAAGTTGCTTTTGCATCTTTTGCAGTACAACTTAAACCAATATGATAATCTATAATACTTCTGTCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1347957-1345174 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1347956 29 100.0 36 ............................. AATAAATGAGATAAAAAAGGAAGCGAAAAAAGCCGA 1347891 29 100.0 37 ............................. GAATGGAAAGAGAAAATTGATGCGGCTTTAGATGTAG 1347825 29 100.0 36 ............................. GTAGATGAACATGTAGACTTTTGTTTACGTGTAAAA 1347760 29 100.0 37 ............................. TTTATTCAAACACGTGAATATGCTAAATATTTGGCAG 1347694 29 100.0 35 ............................. TTTGAAACTATTAACAAGAAAATAACATTAACAGG 1347630 29 100.0 37 ............................. ATCTTGTGTGCTTCTGTATGATGCTCTCTACAGAGTG 1347564 29 100.0 36 ............................. TATGTGATTTAGCAGCAGATAAAGTAGTTTTAGGAG 1347499 29 100.0 35 ............................. GCCAAAAAAAGAAAGCACTCGCAATAATCATTAAG 1347435 29 100.0 38 ............................. GCGTAGCAGGGGGACCTGTTTTTTGAAAGTGCCTTCAG 1347368 29 100.0 36 ............................. TTTACTTAAAATTCAGGGGGTGTAATGTGTGCTTTT 1347303 29 100.0 36 ............................. CTATATACTTTAAAATTAACTGGACTAACATCTACC 1347238 29 100.0 37 ............................. GAAAACCGAAAATAAAGAATTGAAAGAACAGTTGAAG 1347172 29 100.0 37 ............................. TTAAATTTAATAAATCCTTTATCTCATTCAACCACTA 1347106 29 100.0 37 ............................. TCTATGTCTAAAACTTCGCCTGTTTCTTTGTTTATAA 1347040 29 100.0 37 ............................. TTATTTTTTTATTAGTTTTTTTGTGCACATAGTTGTG 1346974 29 100.0 36 ............................. TTTCTTCCGACTACTTGAGGTTAAAGTAAATTTTTA 1346909 29 100.0 38 ............................. TGCTTTTGCTCTAAAGAAGAATTTATATATGTTTTATA 1346842 29 100.0 38 ............................. GGAAGTGGACTAAACGCTGATAAACTAGATGACTGGGA 1346775 29 100.0 37 ............................. ACTTTAAATGAGTTGATAGACTATATATTAATAGAAA 1346709 29 100.0 35 ............................. GCTCTTTTATACGCTTCTGTAGCATTAAGTGTCTC 1346645 29 100.0 37 ............................. TATTTCAAAGCCGGAGTATTGGGATAATGAAGAGCAA 1346579 29 100.0 36 ............................. TCCGTTCGCTTTTGGGAGAGTTTTAAATATGATACT 1346514 29 100.0 35 ............................. AATTTTGCAATTTATAGGCTATAGCTTGCGCCCTG 1346450 29 100.0 36 ............................. TGGGATTTTAGGTAAGTAATCAAATATTAATGCATT 1346385 29 100.0 37 ............................. GTTAGGGGCTTTCTTATTTTAATCAATTTCTAATCAA 1346319 29 100.0 37 ............................. CCCCCGCACCCAATATTGAAGGTGGTGATGGATTGAG 1346253 29 100.0 37 ............................. TTGTTTTTATATTTGAGCAGTATTTCTCTCATAATTG 1346187 29 100.0 37 ............................. CTTACTGGTGGTACGAATGGTGATATAACTGGTGCTG 1346121 29 100.0 37 ............................. AGCCTTAATTCTTAATCACATAATCTTCTAGCTTATC 1346055 29 100.0 40 ............................. ACAAATGCAATGGCACAGCTTTATATGACTGTTATAGTTC 1345986 29 100.0 36 ............................. TTTGATTTTGTAATCTTTAATTTCTTTCACCTGGTC 1345921 29 100.0 36 ............................. GGCAGTACGACTGTTGTGAAGTTTTATCACAAAGGT 1345856 29 100.0 35 ............................. CCATACTCACGAGGAAGATTAATCTTAAACTCTGG 1345792 29 100.0 37 ............................. TCAGATTTTTTTACATGCTTTTCTAATACTAACCCTT 1345726 29 100.0 38 ............................. ATTTGATAGGATTGTTATTGCAAGTTCGGAAAGAACGA 1345659 29 100.0 36 ............................. CATTTTAACAAATAATGTTAAAGATTATAAAACTAG 1345594 29 100.0 36 ............................. TCTATTAAAAAGCGTACTACATTCTATAACACAAAA 1345529 29 100.0 36 ............................. TTTTGTAAAGGTGGTGAGTGCATGGCAAACGAAGAA 1345464 29 100.0 37 ............................. TTGGGATATTTTAAATTACTACTAGATTCTATATAAG 1345398 29 100.0 36 ............................. TAAATGCTTGTACATTTAAGAAAGTAGCTGTAGCAG 1345333 29 100.0 36 ............................. CAAAAAGAAAAATGTAACTGCATTAAAAGATTCTGT 1345268 29 100.0 37 ............................. GAATGGTTAAAAGAAAAAAGAGAAAGAGATAAAAAAA 1345202 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 43 29 100.0 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : TGGTATTGATAAAAGTTTTGATGATATTTTTTATAATTCATAAGAAATTATAATAAAATATTATATTTTAAAGATTTAATATCGATTTCATTGAAACTTTATCTGGAATGTTTACATGCCAGAGTCATTATAAACAGCATTAATTTGTGGATAATTTTGAATATAAATTATGTAATGGATATAGCAAAATCTATTCTAAATTGTTTAAATCGAAGATTTTGTTTTAATTTTGTTTTAATATTTTATTTTAAACAAAATCATTTTTAGGATTTATTTAACCTGAAAATTTTATTTCTAATAGTTGGAAAGATTTTAAAGTTGCAGTAAAGCGGTTTTGATAAAAAAAGTTATAGATCTATTGAAATATCTTAAACAAAAGGCTCTAAATTTATATTACAAAAAACATTACTATAACTTTACTGCAAAAATACTAATCATAACTAAATTTAAGTATGTTGTAAGCCTTCAAACTTCTTATAGGCGGTTATTATAAAAATGGG # Right flank : GTTTTAACATAGTAACTCTATTGTTTATGTTAATCTAAAAGTGGTCCACAGTATTAATTGAAAAATCCCCCACAATAAAATATACTACCCCTATACAAAAGTATAGGGGGCTAGTGGAGGATGATAAGTTTGAAGCAAAAAGCAGAAATCTTACTAAAATATTTTAGAGAGGGTGAATCACAGAGAGAAATAAGTAGAACACTAGGTATCTCAAGAAAAACAGTAAGAAAATATATCAAAGGATTTGAAGAGAAGTTACAAAAATTAGGTAGTGAAAGTGATGAAAAAAAGATACTTTTATTAATCGAAGAAATGGTATCAAAACCTAAATATGACACATCAAAAAGAAAAAAAGTTAAACTAACAGATGAAGTTATAGAAATAATAGATAAGTGTCTTGAAGAAAATGAAAAAAAGAAACTTTCAGGCAAATCAAAGCAAATAATGAAGAAGATAGATATTCATGAATATTTAATAGAAAAAGGCTATGATATAAGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 1519080-1517977 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1519079 30 100.0 37 .............................. GTTGAATTGGAAATATTTAAGTAAAGAAGATGTTAGC 1519012 30 100.0 36 .............................. ATAGTCAACACAAAGATAGGAGGTGAATTAATGAAA 1518946 30 100.0 37 .............................. ATGGTCATTAGGGAATCACCGTCCTTAAGTTTAATTT 1518879 30 100.0 38 .............................. AGATTAATAGGTACTATTGGAGAGGGAATAGCAAAAAG 1518811 30 100.0 38 .............................. AGATTAATAGGTACTATTGGAGAGGGAATAGCAAAAAG 1518743 30 100.0 36 .............................. ATTTATCAACGTGTCATGGAAGCATTAAAATTTAAA 1518677 30 100.0 37 .............................. ATACCCGAAATTGAAAAAGTTGTTGTTTTGTCATATG 1518610 30 100.0 37 .............................. ATTTCCCTTCTAATTCCTCCTTTGTTCTTCATTCTTT 1518543 30 100.0 36 .............................. GTCTACAGAAAAGTTTATTATTTTCAAAGGAACTAG 1518477 30 100.0 37 .............................. AGCATAGACAAGCCTGAGATAGAAATAGATATAATTC 1518410 30 100.0 38 .............................. AATCATGGTATTAAGTACATTAAAGTAGAATATAGAAA 1518342 30 100.0 36 .............................. AATCAAAGTTTTATAAGAATCATCATCACGACCAAC 1518276 30 96.7 37 .............................T GAAGATCATAAATGCTACATAGAAGTTTTTGGTGGAG 1518209 30 100.0 39 .............................. TCACAAGTAGAAGTATACAATGATATAAATAGCGAATTA 1518140 30 100.0 37 .............................. TGGACAGTTTCATACGAAGTATCTTTTACTCCGTTTA 1518073 30 100.0 36 .............................. AATCTTTTTTTCGGAGTTCCTTGATTGCTGCTAATA 1518007 30 90.0 0 .........................A.G.T | G [1517989] ========== ====== ====== ====== ============================== ======================================= ================== 17 30 99.2 37 GTTTTAATCGTACCAGTATGGAATTGAAAC # Left flank : ATAGGCTTAAGTGGTTTACCATGTTTATGTTCGTATTGTTTTAATAACTCTTTATAATTAGGAACTTCAATTGTTTCTACAATAGGAAGTTCGGTATCAACTTCGATTTTTCTATATGGTTTGCTTATTGGTTTATTAGTTTTAGGTTTTATAGGATTTTTAAGATATGGGATTAGAAGATAAATTACTAAAACATAAAGAATTCTGATAGTATTTGTTAAGTTAATAATTAAAGATTTCATTTTTGGGTGTCTCTCCTTTCAGTTTTTAAAATTGTGTTACTTAAAGCATATCCAAGGGGGAGACATCCAAACATAAATAAATTATTCAAATTTTAATGTTTGGGTGTCAAATTTACTCTAAACTTTTGACACTACGCAAAAACACCCGGGGGTCGACAAATAAAAAAGTACTTCAAACTCGCATAACTTCGTGTTATAATATTTATAAAATTAAAAGGTTAATTATGGTAAGTATTTATTTTTAGCGATTTTTGATGG # Right flank : GTATTTAGCATTGTTTAATTTTCTATTTGGAATAAGAGAAAATTTCACTAGAATTTTGGTGCGGAATCTCTGAATATTTGGTTGACAAGTTTGATTTTATATTTTAAAATCTACGTATGGGGGTAGAGGAGGTTGGATGTTATTTATTTTTTTGCAATTTTGCAACCGTTTGCACAAGACTTGCTTTTAATTTTTTGCATTGATGCAATCGTTTGCATAAATGTAAAAGAGATGAGTTTGAATTAAAAAATTATAAGAAAGGAGAGTTTTAGATGTTTAATAGAAGCAAAAAAATTATTTCTCTATTGTTAGTAACTATTATGATGTTTGGCATGTTTTTAGGAATCATACCAAATACATCTGCAGAAGCAAGTTCTAACGATAATATTATCATTGACGGTAAGTTTGATGATGCATGGAATAGTGTGCCTATAATAGGTGAATCACCGCATAGCGGATTTGAAGGTTATAGTATTGACAATTTACGTTTATACAATGAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCAGTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 6 1581029-1580794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1581028 30 100.0 38 .............................. TTTTCTTCATTGGTGGCATTACAAATGTTTGATACCAT 1580960 30 100.0 37 .............................. TCTATCCACTTAATAAATACTCACAAATAGAAGATTA 1580893 30 100.0 40 .............................. CCTTCAATCATCCTATCTACTATCATATTTATTTTTTTTC 1580823 30 76.7 0 ...C.C..C........C.......AC..T | ========== ====== ====== ====== ============================== ======================================== ================== 4 30 94.2 39 GTTTATAGACTACCTATGAGGAATTGAAAC # Left flank : TTTACCCGATAATTTAAAACAAATATGGTCTAATTTAAATCCGAAAGGAGAATTGCCTGTAGGTGAATTAAATCTTGTTAGAGATTGGATATTAAAGGAGTCTTATGAGGGAGAATATGTTCTAGTACAGGGTGAGTTTGGAGCAACATTTTATATAGTAGATTTTTGTTTTAAGTATAACAGGATACCAATTTATGCAACTACTGCAAGAAAAGTAGAAGAAACAAAAGTAGATAATAAAGTTATAACGAAAAGGGTATTTGTACATGAAAATTTCAGAAAGTATTTAAGATATAAAATTTAATTAATGTATATCAAAATGTCGTCGACCTCCGGTAGTGCAAAAAACCCCGGGGATCGACGACATTTTGTTTTTTGTTAAAAACGTGTAAATTTCAATATATAGAAGGGTTAAATCCTAGTATATCAGTAGGAATTAACGCAAAAAATTAATAATTGACAAATTTTTTTAAATATAGTAATATCAATATAAAGAATGG # Right flank : AAATTCTTCTTTAAAGATACATCCAGCTAAATTTTTTAGATTATTTTGACAAGTCAAATAATTCTAGAAAAGGGGTTTTTAAATTGCGATTTAGAGATGTATATAAGAATAATCTATTTATGTTAAAATTTGTCTGGAAATACTACAAAATATATATAATTACTTCTATACTAATCTCATTCAGTTCTATACTAACACCATTAGCAGACGTTTTAGGGCCAAAATATATAATCGATTTCATAAGCCAAAAAAAACCTTTTACTTGGATAGTTACTGTCGTTATATTAATCTTTTCCATTGAAATATTAAAAAGTATATATTATTCATGGTATTATAAATTTATAACTCCAAGAGCTCATAATAAAATTAAAGGCGGCATTAACAATTTGCTTATGCAAAAGGCAGCATCTTTAGATTTAGAATGTTATGAAAATGCAGACTTTTACGACAAATACACCAGAGCTTTAAAAGAAGCGGACATTAGAGCATTAAGCGTAGTT # Questionable array : NO Score: 8.57 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 7 1598491-1593577 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1598490 30 100.0 37 .............................. AAAGTTCCTCCTACTACTGTTGATAGTATTAATTTGA 1598423 30 100.0 36 .............................. TTTGAGTGCAAAAATTTCTCCGCGTCGTAGACCACA 1598357 30 100.0 37 .............................. CTAACCTTAAATACCTCTAAAACGACAGGGATTAAAT 1598290 30 100.0 38 .............................. GTCTTTGGGTCTCTTGCTCGTCTTTTTATTCCTTTTAA 1598222 30 100.0 36 .............................. TTGTTTTGCTTGCTTAAGGCAAAATATTTTGTGAAT 1598156 30 100.0 38 .............................. TATAGTTGGTTTGATAAACAGTCACACAGAGATGCATT 1598088 30 100.0 35 .............................. AGTGTTAATTCATATATTATAGACCATCCTTCCTT 1598023 30 100.0 36 .............................. CCACCATCAATCTTAACATTTACATATGCATCAAAT 1597957 30 100.0 36 .............................. TGTTAATCACCCACTTTCTTTAATGTTATATCTGAA 1597891 30 100.0 38 .............................. CCAGATGCAGCATTAAATATTCCCCATTCTTTCCATGC 1597823 30 100.0 36 .............................. ATCCCCAAGGACTGAATAAACCACCCAGCAAAGGTT 1597757 30 100.0 36 .............................. TTACAGATAGCTTTTATAGAGTTAATCTCAAGGGCT 1597691 30 100.0 36 .............................. TGCTTTTGCTCTAAAGAAGAATTTATATATGTTTTA 1597625 30 100.0 36 .............................. TTTTATTTATATTTTATCTTTTTTATTTTAGTTTTA 1597559 30 100.0 38 .............................. TTTGGATATTAGTTACTAATTTCCACATTTTATGGAGA 1597491 30 100.0 35 .............................. ATCATATTCTATAGTAGTACCGTCTGAAAAAGAGA 1597426 30 100.0 36 .............................. TGATGCCTGTTGTTTACGTCAGCATGGGCGTTGGGC 1597360 30 100.0 36 .............................. ACCTTTGTCGGTCAGGTTGGAGAACTTGGGAGTATT 1597294 30 100.0 36 .............................. CTTACCTACTAACGAGAACGGCTGGCATGCTGGTGA 1597228 30 100.0 39 .............................. TTGTGAAGATGGACATGTTGTTTATGTAGGTATTGAAGA 1597159 30 100.0 38 .............................. TAGGGTATTTCGATAGGTCTGGTTTCCAATCTGTTTTT 1597091 30 100.0 37 .............................. GATAAGAAACATCTGGGGTCTTGCTAAATCAAAGGAA 1597024 30 100.0 37 .............................. TCTCTCTCGAGATTCTCTTCTTCAAACAGAACTGCTC 1596957 30 100.0 37 .............................. ATTGCTTTTACTATTGAAATTATGTGAGTTAATTTTG 1596890 30 100.0 37 .............................. TTGCCAGTGAGGGATGATGAAGCTGTTGGTTGGTTAG 1596823 30 100.0 37 .............................. GGTGCTGGAGCTTTTTTTATAGTTAGAAAAGATCCTA 1596756 30 100.0 38 .............................. TTCCCTAATCTATGCTAATCTATGATGGAGGTGTAAAA 1596688 30 100.0 35 .............................. GTCAGTAGAAAAAATTACAATTATATCTTATAAGA 1596623 30 100.0 37 .............................. AGCTCCTATTTTATAAGGAGGACTAATTAATATCAGT 1596556 30 100.0 38 .............................. CATTAGAGAATTTTCTGCTGATTTTTATAATAATCATC 1596488 30 100.0 36 .............................. ATTAATCCATTTCCAGCAATGATATTTTGATTAGCC 1596422 30 100.0 38 .............................. TGGTATTGGTCTATGCTAAACCATGTTCTATAGTAAGA 1596354 30 100.0 37 .............................. AGAACATCTGTTTGGATATATTATAGCATATTTAACG 1596287 30 100.0 38 .............................. TTGGATAAATACCTTTTTAAGTATATTACTGATTCTTC 1596219 30 100.0 38 .............................. TGGTATTGGTCTATGCTAAACCATGTTCTATAGTAAGA 1596151 30 100.0 37 .............................. GTCATCGGATTGTACGACTGCATCAATAGAGATGTGA 1596084 30 100.0 39 .............................. ATTGATACAGTTGAATTAAATCACTACTCAATAATCCAT 1596015 30 100.0 37 .............................. AGAAAGAGCGAACCACTGGCTGAAAAAAAGAATGCTC 1595948 30 100.0 38 .............................. TAAATCATATTCATATAGTCTTGATATTTCTGCTGTAG 1595880 30 100.0 38 .............................. CTTAGTTATCCATTCTTTTTTTTCATCATCCCATATTG 1595812 30 100.0 38 .............................. ATAGCTTCTTCTGTTTTCTTTCTTTGGCTTCCAAATCG 1595744 30 100.0 37 .............................. ACTATAGTAATTTTTGATATAGGGCATGATAACAATT 1595677 30 100.0 35 .............................. ATAGTATTAAAAAATATAGTAGCAGTCTTATTATC 1595612 30 100.0 38 .............................. CCTGCTCTTATGGGACAGTTATTACAAGTTAGGAAACG 1595544 30 100.0 38 .............................. ACTTTTATTGGGTTCGTGTTATGATATTGTACTGGCAT 1595476 30 100.0 38 .............................. TTTCCATCTTCAAATAAAGCTTTCCATCTTATGTCGTA 1595408 30 100.0 37 .............................. AATTCTGCATCAAATTGACGAGACCTTTCTGCCAAAT 1595341 30 100.0 38 .............................. AGCACATGCATTGAAACTCTTATAAGGTGGAAAGAATC 1595273 30 100.0 36 .............................. ACTCTGGTAAAAAAGGTGTAAGTAGGAGATTAAAAC 1595207 30 100.0 37 .............................. AATATTTCTCTAGCTTTTCTATGTACTATATATGCTA 1595140 30 100.0 36 .............................. TTCTTGTCGAGTGTTATTGTCGGTTCAGTGGTTACG 1595074 30 100.0 38 .............................. ACTTTTATTGGGTTCGTGTTATGATATTGTACTGGCAT 1595006 30 100.0 38 .............................. TTTCCATCTTCAAATAAAGCTTTCCATCTTATGTCGTA 1594938 30 100.0 37 .............................. AATTCTGCATCAAATTGACGAGACCTTTCTGCCAAAT 1594871 30 100.0 38 .............................. AGCACATGCATTGAAACTCTTATAAGGTGGAAAGAATC 1594803 30 100.0 36 .............................. ACTCTGGTAAAAAAGGTGTAAGTAGGAGATTAAAAC 1594737 30 100.0 37 .............................. ATAGTTATGATGAACGGTAATTTGTTTAACTCTACCG 1594670 30 100.0 37 .............................. AAGTATCATTCCTCTCCTTCAATCTACTAACCTATAA 1594603 30 100.0 36 .............................. TTAACTTAACAAGCTCTAATTCATATCTATCTAAAT 1594537 30 100.0 36 .............................. TTCTTTTTCTTTTCTACCTGATATATAACTACACTG 1594471 30 100.0 37 .............................. AAATTAGGACAAGGTTGGCTTATTTATAAAGATAATG 1594404 30 100.0 38 .............................. AGCACATGCATTGAAACTCTTATAAGGTGGAAAGAATC 1594336 30 100.0 35 .............................. ATAGTATTAAAAAATATAGTAGCAGTCTTATTATC 1594271 30 100.0 37 .............................. CTATTAGTCCGGATACGTTAGAAAAGCGTGTTAGAGA 1594204 30 100.0 35 .............................. AACTCCATCATGAGTTTTACTAGCAGCATAAGAGC 1594139 30 100.0 36 .............................. ATTTTCTAGATCATCTTCAACACATTGTCGAAGAAA 1594073 30 100.0 35 .............................. TTTGTTGTTTTTATTGTCCAATCAGCGTACTTTTC 1594008 30 100.0 35 .............................. ATAAAAACTAAAGGAGGTTTTCAAATGATGACTAA 1593943 30 100.0 37 .............................. TTGCAAAGAAAGACGTAGCTTATGATTCACATAAGTT 1593876 30 100.0 36 .............................. TTTCTTGTAGCTCTTGTTTAGTTACACTTACTTGAT 1593810 30 100.0 39 .............................. ATAGATAATAGTATAGTTTATTTTTAAACTCTAAAACAG 1593741 30 100.0 37 .............................. TTGCAAAGAAAGACGTAGCTTATGATTCACATAAGTT 1593674 30 100.0 38 .............................. AACCTCAAATAACTCAAATACTAAACCAACTTCTATAA 1593606 30 93.3 0 .........................A.G.. | ========== ====== ====== ====== ============================== ======================================= ================== 74 30 99.9 37 GTTTTAATCGTACCAGTATGGAATTGAAAC # Left flank : TACATTATCACCAATTGTGGTAACAACCGGTGAAGAAAGAAATGGAGAAATTAAGCCAAGGACAGTACATATAACAGAAGATAAATTTATTGAAAATATTAGGAATAATTTAATAAAAAAATATTTTTTAGTTTATGGTAAGTTACCTGATAATATGAGCATTGATATAAAATTTGATGAGGAGTATATTAAAAAACATAAAAGAGGCCATCTGGTTAATTTTAAGGGCGTATCAGTAAAAGGTTATATTGCTCCTTTTGTAATGAGGTGTTCTGATGATATTAAAAAGGTTGCTGTTGATTGCGGGATAGGAGAAAATAATAGTATAGGAATGGGGTATATAATGGAGAAAAAATAGTTTGTCGACCCCCGGTGATGTAAAAACACCCGGGGGTCGACAAATAAAAAAGTACTTCAAATTCGCATAACTTCGTGTTATAATATTTATAAAATTAAAAGGTTAATTATGGTAATCATTTATTTTTAGCGATTTTTGATGG # Right flank : ATTAGAAATAAGACCAGCTAATAAAAGTCAAGAGTTAATTTAGAATTTTTCGAACCTTTTAAAATACCAGAAACACAGTTAGTTCAAATAGCAATAATAATTATTGTAACAATAATATATATATGGACAGCAGTGAGTGTCATAGAAAAGGGTATAAAACTTTTATCAGATATTAATTTACTAGCTGCAATTGCAATATTGTTAGGTTCTTTCTTGATAGGCCCTACTGTAAAAATGATAAATGCTTTAATCAATGGAATGGGTATGTATATTGGAAGTTTTGTGAGGGAAAGTTTACATATTGAACCATTTGGAGATAATTCATGGATAAATGATTGGACGGTATTTTATTGGGCTTGGTGGATAGCTTGGGCTCCATTTGTAGGAACATTTATAGCACGTATTTCTAGAGGTAGAACGATTAGAGAATTTATTATAGGAGTTATTGTAGCTCCATCATTAGCTTCTTTTGTTTGGTTTGCTATATTTGGTGTTTTAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCGTACCAGTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 8 2278384-2278618 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048617.1 Caloranaerobacter azorensis strain T3-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2278384 30 100.0 39 .............................. TTCGATACATTTCTATATCTTGCATAAGTTGATTTAAAT 2278453 30 100.0 37 .............................. AAATCATCGACTCGCGAAGATTTTTGTTAAATTGACA 2278520 30 100.0 36 .............................. GATTCCATATCTGCTAATACCCAACCTGCAATACTA 2278586 30 90.0 0 .................G.......T...T | GA,A [2278606,2278612] ========== ====== ====== ====== ============================== ======================================= ================== 4 30 97.5 38 GTTATTAGAGTACCTATAAGGAATTGAAAC # Left flank : ACTGGTGGAGGACAGCCACATGTCAGTGCAAAAGATAGAATGACTAAAGATATAATGAAAGAAAGAGCGAAGGCTTTATATGATGAAGATAAAGCTAAAGAGATAAGAAAATCTCATGAAAATCCAATGATTAAGAAGATTTACAAGGAATTCTTAGGAGAACCTAATAGTCATAAAGCTCATGAATTACTTCATACTCATTATGTAGAAAGAAAGAATTATCCTGTAGATGAAGAAAACAAATATAAAGAATATTTTTGTGATTGCAAATAAATTTGTAGCCCTAGCTGATGCTAGGGTTATTTTTTTACGATTATTATGTCGTCGACCTTCAGTAGTGTAAAAACCCCTGGGGATCGACGACATTGTATTTTTTGTAAAGAATGTGTAAATTTCAATATATAGAACGGTGAATTCCTACTATATTAGTAGGAATTAATGTAAGAAATCAGTTAATTGACTAATATTCAGAAAAGTGGTATTATCAATATATGTAATGG # Right flank : ATAGAAAAAGAAAAATATATAAAAATAAGTTCCGTTTTAAACGGATCTTTTTTATATATAAAAATATTTCCAGGGCAATGAAATGACTATAATTAAATAATCATGAGTAAGAAATAACTGAAATAAAGCTAATATTATATTTCGAATTATTAAAAAATATTAAAATTTCTAACAAATTATATTACTTCATATTATCTTAATAATATAATTAATATTAAGAGAGTATATAAGAATAAAATTTTTTAAGTTATGTTTTTTTAATTACCTTAAGTAATCGAAGGGTTAAAAATCACCAAAAAATAACGAATGGAAAGGAGTATTAAAATGCAAAAGAGAATGTTGACACCGTCAGAAATAGCTCAAGCTACCATTAATGCAGGTATAAAAAAAGCTAATTTATCAGCTCTACAAATGATTTTATTGGGTATTTTTGCAGGTATTTTTATAGGTTTTGGAGCACAAGCAGATATTACTGTTATGCAAACGTTAAAGAATGTTGA # Questionable array : NO Score: 8.74 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTAGAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //