Array 1 3881-669 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMJ010000017.1 Acinetobacter baumannii strain MRSN2338 MRSN02338_contig00017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3880 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 3820 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 3760 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 3700 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 3640 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 3580 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 3520 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 3460 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 3400 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 3340 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 3280 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 3220 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 3160 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 3100 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3040 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 2980 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 2920 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 2860 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 2800 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 2740 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 2680 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 2620 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 2560 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 2500 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 2440 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 2380 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 2320 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 2260 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 2200 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 2140 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 2080 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 2020 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 1960 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 1900 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 1840 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 1780 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 1720 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 1659 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 1599 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 1539 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 1479 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 1419 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 1359 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 1299 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 1239 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 1178 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 1118 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 1058 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 998 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 938 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 878 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 818 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 758 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 698 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //