Array 1 90641-91651 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFK01000001.1 Wohlfahrtiimonas chitiniclastica strain F6512 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 90641 27 75.0 174 .......ATG...A.C...-....T... GGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTTGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATCAACTGCCGAAATCATGATGTTTCCAATGGCATTGTTATATTTTTAATT T [90645] 90843 28 100.0 32 ............................ GACTCTGATTATCGATTCTTTATCAAAGCTAA 90903 28 100.0 32 ............................ GAAATGAGGCGTAAAGGTATCATCACAGGGAT 90963 28 100.0 33 ............................ GACCGACTAAATCAAGCGCATAACCTTCGGCTT 91024 28 100.0 32 ............................ TATTGAATGGATCAGGTATTATGACAGCGGTT 91084 28 100.0 32 ............................ TATGCTATTAGGCTTTATGAATTGATTATTGC 91144 28 100.0 32 ............................ TTTTAAAACTTTAGCTCCCTCCCTCTCTCGAT 91204 28 100.0 32 ............................ ACGCAAAAACGCTTACAACCCTACTATGACAA 91264 28 100.0 32 ............................ ACAGAACGGGCGGTTATGGCGTTGCATTTCAT 91324 28 100.0 32 ............................ AAAAGAGCAAGAGACATAGGCATCCGGGCATA 91384 28 100.0 32 ............................ AAATAAAGGCCTCGAGAAATCGGGGCTTTTTT 91444 28 100.0 32 ............................ TGCGATTGATGACAGCATATAGCGTCTTGCGT 91504 28 100.0 32 ............................ GGCTTAGGAATTAGTTTCACATTCAGTAAAGC 91564 28 100.0 32 ............................ AACCACGCCGCCCAATGTTCGAGATGCCATAA 91624 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ============================================================================================================================================================================== ================== 15 28 98.3 42 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACAAAAAATTTCTGTGCGTATCGTCAATGAAGTTAAGCACGTGAACCGCATTGTGTATGACATCACAAGTAAGCCACCTGCAACGGTGGAGTGGGAATAATTTAGTTTCCACGCATTGACATGAACACATAAAATGGCCTAAATAAATATTAGGCCATTTTTTTTAATGATTTTTAGGAGAGTTGAATGAAAAAATTATGGATGATTACAACCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACAGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACTGCCAC # Right flank : AGACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCGCCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATTCACAACCGGGCAGCCTTGACTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAACTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCCACATTGCCATAACCATGGGCGACAATGCTTTTGATCTCTGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCG # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.96, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 215623-217272 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFK01000001.1 Wohlfahrtiimonas chitiniclastica strain F6512 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 215623 28 100.0 32 ............................ ATCCGCTCATTATTTTTGAGTAGCGATCTTTA 215683 28 100.0 32 ............................ TAAACTGACTGCTTTAAACACATTTTGCGATA 215743 28 100.0 32 ............................ ATGATTATCAATCTCATTAGAGACGGTCTTGA 215803 28 100.0 32 ............................ TCTCTCAAACTTCGTATAGGGTACGGAAATAC 215863 28 100.0 33 ............................ CGATCTTATTCAGCTCATAAATCAGCTCTTTGT 215924 28 100.0 32 ............................ AATACAATTGGGATGCCGTATTGACTGAAAAC 215984 28 100.0 32 ............................ AAACATTGAAATGACCACAGGAAAACGCTTTC 216044 28 100.0 32 ............................ AATCAGAAACCGAACCGTTTGCTCTTTCTTGT 216104 28 100.0 32 ............................ AATGCGGCTAGTGATGCGGCTGTTAATAAAAT 216164 28 100.0 32 ............................ ATTGATGGGGCTGATTTTTTGGATTATTTATT 216224 28 100.0 32 ............................ TTTCATCTCCGAGCTAGAACGTAATTTCACTA 216284 28 100.0 32 ............................ ACTCTTCCCTTATCGTTATGTTCAATCCAAGT 216344 28 100.0 32 ............................ TTCTTTTTAAACATGCTTTCCTTTTGTCAATA 216404 28 100.0 33 ............................ CAACTGATGCTATATTTTCAACTTGAACTGTTA 216465 28 100.0 32 ............................ ATGAATTTAGAATCCATGCAAAAGATTATGCC 216525 28 100.0 32 ............................ GTTCGACTCTTTTGCCATTTCTGCAATTTGCT 216585 28 100.0 32 ............................ AACGGTATAGTTGTTTTTAAACTCCAGTGATT 216645 28 100.0 32 ............................ AAGAATTTACTCGAAGTTATCAGAAAAAGAAC 216705 28 100.0 32 ............................ AACGGTATAGTTGTTTTTAAACTCCAGTGATT 216765 28 100.0 32 ............................ TCACGATCTCTATTTTTACCCAAAAGATAATC 216825 28 100.0 32 ............................ GCATAAGAATATGATTATAAAGGTGTATTCGG 216885 28 100.0 32 ............................ ATACTTTGATAAAGCTGATCGCGCGCTAGTTG 216945 28 100.0 32 ............................ AAACACGAGGGCGCACAGGTCACCGAAATGAG 217005 28 100.0 32 ............................ GAAATCATCAAACCAAAATCATTAGGGCAAAT 217065 28 100.0 32 ............................ TTACCCAAAAGATAATCCATACTGGCATTTGC 217125 28 100.0 32 ............................ CGCCCTTTGTCGTTATGTTCTACCCATGTAAT 217185 28 100.0 32 ............................ CATCATTCTCTTTTCTTTACCAAACCAAACTC 217245 28 96.4 0 .............C.............. | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.9 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTGAATGCAGGTTTGTGGCTGTCACGCTTGACGGATTATGTGCACATTTCTTCCATTAAGTCGGTGCCCAATCGTGTGACGCATTATGCGATTTATCAGCGTAAACAGGTCAAAAGCAGTGTTGAGCGTTTAGCGCGCCGCTATGCTAAGCGTAAGCATGTGACATTTGAGGATGCCATGGCACATTTGAATGGCAAAACGCCAGAATATTGTGATTTGCCTTATGTTCAGATGAAAAGTGAAAGCACGGATCAACGTTTTCATTTATTGATCCATAAAGTAAAAGTGACAGCCCCAACGGAGGCTGCAAACTTTACAACGTATGGTTTGAGTCATCATGAACAATTGTCTGCTGTCCCTGAATTTTAACCAATGTTTTTTGCTCTTTAAAAATTTGGATAAAAATCAGTAACTTATAAAATAAGGAAAAATCATTGGTCTTTTTAGGTAAACTACCTGCGATCAGTGATTTTTCCTATCTTTTGTGCCGAAATTTTACT # Right flank : AAGTGGTTCCATGGTGAATTTGGAAAGTTGGCGGTTCACTGACTAAAAATTGAGAGTTTATAGTAGAAAATTTTCTGAGAATTTGAGAAAAAATTGCAGAAAAAATGATAAATGTTATAGTTTGCACGATTAGATGAAATACAAGTACAAAATATAATGTGCCAACAATCATCATAAGTATATAGATAAAACAACATAATATATGAATACTAAGGAGAGTATTATGCATATGCATTTGAGTAATGAAGATCTTGATGGCTTAATCGCTGAAATTACGACGTCGCAAGAGTGGATAAAAATGGCGACACACACCATTGGTCAGCAATATGATAAAGCTGCGTTAAATGACATTACTAAAAGCGTGAAAATGATCATTGGTCACTTTTTAAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATTACATCCTTGCCAGTGTTTGCAGATGCCAATAGCAATACCGGTGGCAGCACACAATGGAATAATTCTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //