Array 1 193559-191822 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG745510.1 Klebsiella variicola strain 1_1_55 supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 193558 29 100.0 32 ............................. CTGATCTGGCCGGACTTTATCGCCTACAACCC 193497 29 100.0 32 ............................. CGCCTCCGTTCAGGGGAAAGGGTTTAGCTTTA 193436 29 100.0 32 ............................. CCAGAAGAGGAGGCAACTCTGGACCTTATAGC 193375 29 100.0 32 ............................. CCGATAATGTGGTGGCCGCCAATGAGGGCACT 193314 29 100.0 32 ............................. GCTGGCAGGGGCAGGAGCCGGTCCAGACTGGC 193253 29 100.0 32 ............................. GCACACGGCGGCACTGATGCAGATGTGAACCT 193192 29 100.0 32 ............................. GAACGCCGGGAAAATCCCGATCCTCTTCGCAC 193131 29 100.0 32 ............................. GCCGACTCGACGGCGCTCACCGCGCTGGATAA 193070 29 100.0 32 ............................. GGGATTGCCAGCGCCCACGGCTCACGCGCACC 193009 29 100.0 32 ............................. GCGCTGAACGCCACGCGAATTTCAAGATTTTT 192948 29 100.0 32 ............................. GATGAGATAGCAGACCTGCGCCAGCGCATTGC 192887 29 100.0 32 ............................. GATAATTTCAGGCACTTCTTTGCCTTTATTAT 192826 29 100.0 32 ............................. GTGTTGTGTCCACGGCGATCCGCAATGCGCTG 192765 29 96.6 32 .......................C..... GCTCAGATATTCAGGAGATAGGTGAGCGCCTC 192704 29 100.0 32 ............................. ACTGATATCACCGAACTGGCGCAGCGTATGAA 192643 29 100.0 32 ............................. ACAAAAAAATCCAGCCGCAGATCGCCCTGCCG 192582 29 100.0 32 ............................. AAATATGCCTTATGGATAATGACTGACAATAT 192521 29 100.0 32 ............................. CCAAACGGCTGGGTATAAAGATGGGAACCCCC 192460 29 100.0 32 ............................. GCAATTTCAATAAGACAGCCGTGGGCCTGGCT 192399 29 100.0 32 ............................. CTTTCTGCGATAGATTTCATTCGAGTACCCCG 192338 29 96.6 32 .........G................... CCGCAGGCTACATGACCGCGTCGGAGACATCT 192277 29 96.6 32 .........G................... CTGTACTAGGCCAGACGATGACAACGGATGAC 192216 29 96.6 32 .........G................... ACCGGCGGACGCAAAGAGGGAAGTGCCGGTAT 192155 29 96.6 32 .........G................... AACACCCTCACTGAAATGGTTCGCCTCGCGGT 192094 29 93.1 32 .........G..T................ TGATTTTCAAGTTCCCGCCGGTCACTGTGACA 192033 29 96.6 32 .........G................... ATCCCGTCTGCCCATTTGGAGATTGAAGGTTC 191972 29 93.1 32 .........G.A................. TTCGCGATATCCGCCTGCGCCGCCGCCAGAGT 191911 29 96.6 32 .........G................... TCGAGGCGAAAATTTACGCCGGGCGTTTTCAT 191850 28 79.3 0 .........G.AT..-.........G..C | T [191837] ========== ====== ====== ====== ============================= ================================ ================== 29 29 98.0 32 GTGTTCCCCACGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATTGAGCCGCCTCAACCACCGCCGGATATGCTGCCGCCTGCGATACCCGAACCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTAACGGAAAATGTTCCACCTCGCCTGCGAGGACGTCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGCGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTCAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACGAACAGCGAATCAGGTTTTGAGTTTCAAACTTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCTTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGGAATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTTTTATAAAATAGTAACATATCTTTAGT # Right flank : GCAACTAACAATCAGGCGCCATCTCATAGGCTGCTTGATGGTGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAGGTATTGATAAACGCCTGGGCGGTGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGACCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAATTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.10,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1025190-1025401 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG745508.1 Klebsiella variicola strain 1_1_55 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1025190 28 100.0 33 ............................ CTGCAGCGGGACATCATTTAGCGTGATGACATC 1025251 28 100.0 33 ............................ TGTTAAGCATGGTTTTGTCAGAGTATATGGACT 1025312 28 89.3 33 ...........G..T..........G.. TAAAAAAGAAAAACTCTCCGGTTCCCTGTTCGG 1025373 28 82.1 0 ......A.....C.T......C.....T | C [1025394] ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.8 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TCAGCGTTGGCCAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAATAGCCTCCAGCTCCCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTACGCGAAGCCACGGAAGGCAAACGTCAAGACGTCGCGCTATATTCTGGGGATGACAAAAGCGTTTGGCGCCTGGCTATGGATCGGGCAGGCCAGTAGGGTAGGCCGGCCCAGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATAAAGGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTATCGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGTTTGATAAGGAAATTAAAATGAAAAGAGCCGAATTAGACGTTGTGGTTTTAGGTGAGGATTTACCGAATGAAGGGCTGGTAAAAGGAACGCTTGGTACGATTGTGATGGTTTTTAATACGCCAACAACTGGCTATCTGGTCGAATTTTGCGACGAGAAAGGAAAAACAATCGCAATGCCAGTTTTATTCCCCGCCCAGCTAAAGCGCTATTTCACGATTGGTAACCTGAAGTCGCTGATGGTGGAAGGTAATTATCCCGTTGCCGACCCTGTAGACCCAGATGTCATGGCAGATTTAATGCACAAAGTCGCGCCTGCTGAATGGGAGGACAAGAAAAGAAGGGTCTATGAGGATATTCAACGACTGTTGATTAGTCGGCCGGACTACGCGGATATGTTCAATATTATGGATGGGGGTGAGTACAATGGCATGACATTGTACAGCCTGGTGCAGGCAGAGAACGGTGAACCTGCATGGTCGAATATCTTTGTTCGAAA # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //