Array 1 1709-1281 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAEG01000048.1 Campylobacter coli strain MON328 NODE_48_length_13248_cov_13.289168, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1708 36 100.0 30 .................................... GCAAAGATAGTAAGATCTGGATTGATCTGA 1642 36 100.0 30 .................................... TCAAATTTTAACTCCCAATTTATAAAAGAG 1576 36 100.0 30 .................................... ACTTGTTTTAATTGCCTTATTTTTAATTTG 1510 36 100.0 29 .................................... TAACAAATTGGAATTTGTAGCAACATGAC 1445 36 100.0 29 .................................... ATTGCTCTCACTATCAATATTTATTTGAT 1380 36 91.7 29 ......C...............T....A........ ATAGCAAAATCACATATAGTAGTTATTAA 1315 35 80.6 0 ......................T..-.TA..TT.T. | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 96.0 30 ATTTTATCATACAAACATTTAACAAGAGGCTAAAAC # Left flank : TAGTGAGAGTAGATTTGTTTGTAGATAAAAAAAGCAAATTTCATGCAGTACCTATTTACAAAGCAGATTTTTCCACAAAACAACTTCCAAATAAAACTCCTGCTGCCATATCAAACGGAAAAATTAAAGAAGGGGTTGAAATGAATGAAAATTATAATTTTTATATATCATTATATAAAAATACCCCAATTAGCGTGAAAATCAAAGGCATGGAAGAGCCTATCATTTGCTATTATCACGGTTTTAATATTTCAGGAAGTCAAATAATCTACAAAAAGCACGACAATAATTATTATAATCTTAGCAAAGATGAAATGGCTATTTTTAGAAAAGGGGATAAAGAAGCTATAGCTATAGGAAGAATGCTTGAAATTAAAAAATACAACATAAGTCCTTCAGGTGAATTAATTTTGATTGAAAATGAAGAGCGTAAATGGTTTTAGATATTTTGTGAAAAAATAATAAAAAACATTGATAAAATAGGCTTTTAAAATAAGTCT # Right flank : CTCCTGCCATCATTTTTTTAAATAAAAATTTTCCTTAATATGCTTTCATCAGAGCCTTTTAAAAAATAATAAATTTTCTTTCTATAGCTTGACTCATCTTTTTTCCAATTGTTTAATGTTGCTAAAGGAATTTTTGTAATGTCAGCAATTCTTGAATCATGCAAGCCTATATTATCATAGCTAATGGCATCGGAGAATATTTTTTTTAATTCTTCTTCATTTGTATTTTTTAAAAAAAGATATAGCTTAATTCTCCAATTATTCTCTTTTTGCTTCCATTCTCTGATGGTAAAATAAGGAATATTAGTAATTTGTGAAATTTTTACATCATTGTTCATCAGGCTTAAAACCACTATCTAAAATTATTTTTGTCATTACACCCTTAAGATGATCAAAATGATTTAAAGCCTGCATATTACTAACTCTAAGAAGTCTTATTTTCCCATCTTTTTTATAAAACACTTTAAAAACTTCATCACTTTGTTTGTGTTTTACCATAT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTATCATACAAACATTTAACAAGAGGCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //