Array 1 188252-186220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOH010000001.1 Butyricimonas sp. NSJ-56 YF_D7_34_ctg001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 188251 47 89.4 30 A....A....A.A..T............................... CCATACTTAGAATTTTCAATACGCGAAAAT 188174 47 100.0 30 ............................................... GCAAGCCATGTGATGCATACGTTGGACTAA 188097 47 100.0 29 ............................................... CCATTCTTATCTAATCGAGGAAGAGATTT 188021 47 100.0 29 ............................................... AGAATCAAAGAAGCTGAACAAGAATTATT 187945 47 100.0 29 ............................................... ATTGCTTCTATCTTTTATTGACAAGTACG 187869 47 100.0 30 ............................................... AAAATAATCATTATAAATCTTCACATAAGC 187792 47 100.0 30 ............................................... AAAAATTCCGGTCTACAAGGGGAGGAATTA 187715 47 100.0 30 ............................................... TTTCCGTTAGTTATTCTATTCACGATAGCC 187638 47 100.0 30 ............................................... AAAAGAGCCGTTCCTATAGAAGAATTACTG 187561 47 100.0 29 ............................................... TTGTCTAATGTGTTGTTTAGACTCTTCTC 187485 47 100.0 21 ............................................... CTTGTCCGGCAGCATCAGATA Deletion [187418] 187417 47 100.0 29 ............................................... TCCGTGAAAATAGAAATCCATATAGGTTC 187341 47 100.0 29 ............................................... ATTATTAGAACCAGTAGCAATAAGGTTAT 187265 47 100.0 30 ............................................... TCGCCCGAATTAATGAATTTTCCGGATTCA 187188 47 100.0 30 ............................................... GGAAGCAGTTATCAAGAGAGGAAGGAATCC 187111 47 100.0 29 ............................................... CAAAACTTTTTGATACCCTCCCAGAAGTT 187035 47 100.0 30 ............................................... TGTATATACTAATTTCCACCGTTCGATCAC 186958 47 100.0 30 ............................................... AGATGAACCTCGCTTGGGATACCGGGGTAC 186881 47 100.0 30 ............................................... AAGCAAAGATTTTGCCAGCAGGTTTTCAGT 186804 47 100.0 30 ............................................... AAGCAAAGATTTTGCCAGCAGGTTTTCAGT 186727 47 100.0 30 ............................................... AAGCAAAGATTTTGCCAGCAGGTTTTCAGT 186650 47 100.0 30 ............................................... GCTTATCAACTTCTGAACTTCACGCATCGC 186573 47 100.0 30 ............................................... CATCCGGGCGATAATCCAATGTGCTGATGT 186496 47 100.0 29 ............................................... AGAACCTACTGCAGTAGGTCCAGAGCTAG 186420 47 100.0 30 ............................................... AATCCAGTGTACTCTGGCAGGGCTGGAGAG 186343 47 100.0 30 ............................................... GTATTCCGGCTTTCCCAACTCCGAACATAC 186266 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 27 47 99.6 29 GTTGTGATTTGCTTACAAATTAGTATCTTTGACCTATTGGAAACAAC # Left flank : TTGTCGCACGACGCTAACGTCATGCTAATCCATACGATTGTCAGAAAATAAAACCACTTTTTCATGAACATAACTTCCCTTTTAGTCAGAAAAAGGCTTGACGTACACGGTCGACAATTGTTAAGCTATCGGCGTTCACGTTCTTCCTTCCCCTTGAACGTTAAACAATGTTTGCATGGCAGGTCTTCTGACTTGTTTCCTTCCCGGCGTCCTTCCCATCCTTAAAATGGACAGTGGATCGTGAGTGCCGGAGAAGTTGTTACGAAACTTACAGCAGTGGATCTGTTCAGGATTTGCACCTGATTCCCTATTAATCCCACGTAAGATTGTAGAATATCTTACACGAGAACCATAACGCCGCAAAAGTAATATGTATTTTTTAATATTGCTAATGAATGGGGAAAAGATTTATTTCTCCGGAATCACGCTCTATCTCTAGTTATTGCGAGTTTTAGCATTGAGATTTATCTTGAACTTAGATTGTAACCATATTGTTGTGT # Right flank : TCAATCTTTGTTATTGTTTGAATAACAAAGATTTATATCTTGAAATAGGAAAGAAAAAAGGGATAGAATCCTTACAATAAATCTCACATAAAAGTGGGATTTATTGTTTTAAAATAATTCCAATTGTTGGCCGGGAGAATCGGGTGCTTGTGGTTTATGTCCATAAAATAATTCAATACTTCCAAATTGTTTATCTGTGATGCACATAATTCCTACTTTTCCAAATTCAGGAAGAAAGGATTTCACTCTTTTAATATGGACTTCTGCATTTTCCATGCTAGCGCAATGGCGGATATAGATAGAAAATTGAAACATAGTAAAACCATCCCGTTGTAAATTTTTCCGGAAATCGAAATATGCTCTTTTATCTTTTTTAGTATCTGTTGGCAAGTCGAAGAAAACAAGTATCCACATAATACGATATTCACTGAAACGATCCATGCTACTATCGTTCGGGATAAACTATTTTACGGCTTTCCCCGCAAAAACATTTATAAAGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTACAAATTAGTATCTTTGACCTATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.70,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //