Array 1 49604-50107 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOY01000007.1 Clostridium botulinum strain McClung 844 20503_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================================== ================== 49604 31 100.0 36 ............................... CAAATAGATCTGCTTTTATTCTTCCTGTATATCCTA 49671 31 100.0 33 ............................... TTTTAGGTATAAGTGACCCAATATTAGGCACGT 49735 31 100.0 35 ............................... TGCTATGCCGCAAGAGGTAGAGAAGGAAAAGCACC 49801 31 100.0 34 ............................... GGGAAAATAATCTCAGAGTTGCTTGTCCTGGTAG 49866 31 100.0 35 ............................... ACTATAACATTTAAAAGAGGAATAATTCTTAAAAT 49932 31 96.8 114 ..............................A GGGAACCCAAATCTGTGATTTGGTGTGAGTCGCTTACTCATTCGAGGAAACGAGAAGGAGTTTCATTAAATAATTAGATATTTAGTATTTTAAGCTTATGTATGGCTTGTAAAC 50077 31 87.1 0 A.......T......A..............A | ========== ====== ====== ====== =============================== ================================================================================================================== ================== 7 31 97.7 48 GTTGAACAATAACATGAGATGTATTTAAGCT # Left flank : GTATGACATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAGAATAGGTTCTGTGCCAGTTACTCCATCTCTAAATTCTACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATATGATTAGGTTAAGGAAGTTGTCATTTGGGTATCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAACCGACTCTAGTTCCAAAATCTATCTTAACCTTTGATATATAAGAGGTTAGGGGGTGCTTTTTATGTAAATTTCAAATTATTTAAAACGGTTGGAAAATTTTGTTTAGAACCTTGTAAAATCAATGGTTCTATGATATTCTTCAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAATTCAAATCTGTGATTTGATGTGAATTGCTTACTCCTTGGAGAGTAGGGGAAGGAGTTTCATTAAGTAATTATATACTTAGTATTTTAATACTAGATATAATACATAAGATTAAATATTAATATAGTATGTAATACATATAATGAAAATTATTAAAAGTCTTAGAAAAATCTAAGACTTTTATTTTATGCAAAATTTTAGAATTAAATATAACACTAGATTTAAAAATATTTAATGGAAGCAATAATATTTTCAAATTTAGTTTTTATAAAAATTAAGTAAAATAATTGGTTATATAACTAAAGAACTGTATGGTATAATATAGATAAAATTGTATAAAGAGGTGTATAAATGGAATTTTGGGAAGCAATTGTAACAGTCATGTTAAAAAAAGACATATATTTTGAAGATTGTGGATATATAATAGGGAAAAATATAAATAAAAGTATGCTTTTGGATAAAGATTTAAAAGAAGTACATCCAAAGAAACAGTACA # Questionable array : NO Score: 4.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-1.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 70143-70571 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOY01000007.1 Clostridium botulinum strain McClung 844 20503_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 70143 30 100.0 37 .............................. GGAATTTCATTTAATATTGCTATATTATTTATTATCC 70210 30 100.0 34 .............................. AAGTTATCTCTTCCAAAATATCCACCAGTATAAA 70274 30 93.3 35 A.......A..................... ACCATACTAATAGAGCTATAACAATTAATTTAATG 70339 30 96.7 38 ...............A.............. TATGCTCTTTTAGCTGCATAACCAGCTATTTGTGTTAA 70407 30 93.3 38 ...............AG............. TGCACTAGCTTTTATTTTTTCTATAGTTTCGGTTTTAC 70475 30 96.7 37 ........A..................... AAGGCTTTGTCAGTCAGCCCAGCGCTATTTTTCATAG 70542 30 86.7 0 A.................G.........GC | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 95.2 37 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : GTTTTTTGCAGTAAACATTTATGATACGATTGTTTTAGATATAGGTCTTTTTTGTCATAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCGTGGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTTATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTACTTCGAGAATGGGAGAAGTAGTTTCATTAATGAGTATAGTATATAGCTTATATATAATTGAAGTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGGATAGGTTTGCTTTATGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTTTCAAACCTTGTAAAATCAATGGTTCTATGCTATCCTTTAAATTAAGAAATGGTCATTTTACTATG # Right flank : CAGAGAACTCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGTAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTAT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 71109-71468 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOY01000007.1 Clostridium botulinum strain McClung 844 20503_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 71109 30 100.0 37 .............................. TACAAGACTATATTGATAAGCATTAAGGTATAATTTA 71176 30 100.0 36 .............................. AGTTTATCTCATTTATTGATGCGGATTTGATGAAAT 71242 30 93.3 36 ........G......A.............. TGAACTTATAATATATAATGTAATTAAAGGTTAAGA 71308 30 100.0 35 .............................. TCTTTAGCGTCTTGATCTATACCTATATATTTAAG 71373 30 96.7 36 ..................G........... CCAGTTAATTTATCTATAACCTTAAATACCATATAA 71439 30 90.0 0 ...............AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.7 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTCCTTAGAGGTAACGAGAAGGAGTTTCACAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGCCATTGATATATAAGGCTTAGAATAGGTTTTTGTTATGTGCTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTCTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGGAAACTTTTTCTAGAACCTTGTAAAATCAATGGTTGTATGATAATCTTAAAAATAAGGAATGGCTATTTTACTATGG # Right flank : CAAATTAAAATCCATGATTTTTTCCCTTTAAATTTATTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGCCATTTTAGACTTCCCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGACATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATAT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //