Array 1 65919-65678 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622581.1 Eggerthella sp. 1_3_56FAA supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 65918 34 94.1 35 ......T................G.......... TCGATTGGCTCAAGGCGGCAGACCCGAAGCTTGAA 65849 34 91.2 34 .........C..................C...G. CTCTACGGGATCGAGCCGGTCAAGGCGTCCGGCG 65781 34 100.0 36 .................................. TGGTATCGAAGTCACTGCGCCACAGCCATGCCGACG 65711 34 88.2 0 ..............A.A..T...G.......... | ========== ====== ====== ====== ================================== ==================================== ================== 4 34 93.4 35 GTCGCACCCTCATGCAGGGCGCGTGGATTGAAAT # Left flank : GACTGCTATATTCTTGAGTGAGGATAGCCATATCGGCCTGATCATACCAGGATTCCGCGGCGGCCATGTGCGCGCTGCTTGCCGTATCGGGCGGCTTGTCATCGGCCGAATTTGCACAAAAAGCGTCGACGTTCGATGTTGTGAACGCTCGCGCTTCTTCTTGCCCGCTTGTTCGTCGGCGTTTTCCCTGCACGTTGATTGCGGGGGAGGCTTTGGCTGGGGCGATGGTCGAGCAAAGCATCCAACGTCGGCGATTTTTGTTCAGGAGACGCCCTTTTCGTTGCAGTCATGATGACGGCAGGGCCTTCTTTGCGAAAAGCGGCGGCGGAGGATGCTGCAAATTCGACTGAGTGCGAATCAAAGGCGAACATGATCGATGCGGGAGGTTCGCACCCGATGCGGGATCGATTCGATCGTCGAGGTTGAGACAGTGCGGTTGGCTGCTTGCACGGAATGCAGGATATTGTGCTCGATTCCTTCTCTATGCCATGATCGTTGCG # Right flank : CGGTTTCGGGCCACTCCGCTCCGCCCCTTCCGCTCTTCGTGTGCAGCAAAAACGAGGTTTTGGCAGTCTTGACCGCTTGGGACGACGTGTTTTCGAGGTCGGGTGCCGTGTTTCCGGGGCGCGGTCGAGTGTCATCTGGGGTTTTGCCGCGGTGCCGTCTCGGGTGCGAGGACTCCTCGTGCCAAAACCTCGTTTTTGCTGCACATCGCCTTGTGAAAACGTGCGGCGGGGCATTTTTCAGGCAGCTGTGGGGGCGGGTTGGGCGCGAAACGGCTCCCATGACAATCGCAAGGCGGCTTCGACCTGCTTTGACGCGCCTTATCGCCTCATGCGGTCGTATGATCCCAGGTGACGAAATCCACGTGCGACCGTCGATACCCGACTCGACCGCCGAAACTGTCATAGGAGCCGTTTCGCGTCCAACCCGCCAACCGCCCGCCAACCCGCCAACCCGTCGACGCAGCGCCTCCCCGCCATCCCTCGCGCAGCTGCGACAGCGC # Questionable array : NO Score: 6.72 # Score Detail : 1:0, 2:3, 3:3, 4:0.67, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTCATGCAGGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCATGCAGGGCGCGGGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 124513-128882 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL622579.1 Eggerthella sp. 1_3_56FAA supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 124513 33 100.0 33 ................................. CATCTCCTTGCTTGAATGAGCGCCGAGAACCCC 124579 33 100.0 33 ................................. ACCTTCGTCTTGTACGCCGTCGTCCACAAATGG 124645 33 100.0 33 ................................. ACCGTGATAACGTCGGTGTCCGCGAAGGGGCGC 124711 33 100.0 33 ................................. AGCTCCAAAAGGTCTATCAGCTTAGACGAATGA 124777 33 100.0 34 ................................. AGCTCCCATCGCAGCTTGTAGCCCATCCTCCCGT 124844 33 100.0 34 ................................. ATCACGCAGTCCGCAGACGGCGGCGAGACATGGG 124911 33 100.0 33 ................................. GTGAAGGGATACATCGACGCGCTCGACGTGAAC 124977 33 100.0 33 ................................. ACCTTCTGCTCCGCGTCAAGCCCCATGTTCTCA 125043 33 100.0 33 ................................. CTGAACTTCGCGGCCATGAGGGGAGCGCCCACG 125109 33 100.0 32 ................................. TGTTAAGGAGGTGAGCCGATGACCAAGGCTAA 125174 33 100.0 34 ................................. CTGAACGACTACGGGCTGCAAGACCTCGTGGGGC 125241 33 100.0 33 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCG 125307 33 100.0 33 ................................. TACTCCGAAACGGAGTACATCCATGACACGGAG 125373 33 100.0 33 ................................. CGACACCTGCGCCTGAGTGTTTCCGATGGTAAG 125439 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 125505 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 125571 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 125637 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 125703 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 125770 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 125836 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 125903 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 125969 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 126036 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 126102 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 126168 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 126235 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 126303 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 126369 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 126434 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 126501 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 126571 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 126637 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 126703 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 126768 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 126835 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 126902 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 126970 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 127037 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 127104 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 127171 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 127240 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 127306 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 127372 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 127441 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 127508 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 127574 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 127642 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 127709 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 127776 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 127843 33 100.0 32 ................................. ATGCTACTAGACGATTTTTTGTTCCGAAATTG 127908 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 127973 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 128040 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 128106 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 128172 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 128238 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 128308 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 128377 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 128443 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 128509 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 128580 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 128646 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 128713 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 128782 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 128848 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [128852,128864] ========== ====== ====== ====== ================================= ====================================== ================== 66 33 99.3 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //