Array 1 503247-503701 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFGF01000001.1 Klebsiella variicola strain 4300STDY6470483, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 503247 28 92.9 33 A.............T............. TACCCCAGAAGCATTTACCCCACTGACTGACCT 503308 28 92.9 33 A.............T............. TTATCTTGGCACTTTGTATCTTGACCGCCTTCA 503369 28 100.0 33 ............................ CTGGTTATGCCGTAGTTGATTTCTCCGTTAAAC 503430 28 100.0 33 ............................ TCACCCTCAGGGGCGGCGTGTGGCACTGTCATT 503491 28 100.0 33 ............................ CGACGAAGAGCGCGGGCGCGAAACGGCGTTGCC 503552 28 100.0 33 ............................ TCCGGCTAAAGCTAACACAGCGAAGCTTGGCGA 503613 28 96.4 33 ..........T................. TCAGTGGACCGGCCAGGCGTATATCAATCTGGG 503674 28 92.9 0 ...................A.......T | ========== ====== ====== ====== ============================ ================================= ================== 8 28 96.9 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TCAGCGTTGGCCAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTACGCGAGGCCACGGAAGGCAAGCATCAGTACGTCGCGCTACGTTCTGGGTATGACAAAAGCGTTTTGCACCTGGCTGCGGGGCGGGCAGGCCAGTAGGGTATATCGGTCCTGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATAAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTATCGTAAATCTGGTGTTTTAATACGCCGCTAGACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTAACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATATTTTTTATATGATTTTACTTATAAATATTCGTGAACTATGTTTGTTCTATACTTTCTTTAGGGACATCTAAATCGTTCGAGTTTCTTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAACTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGGTATTTTTGATTTTATAAAAAGTTATTTGTAAATTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTTAAGGAAAAATCCCATGAGGCGCTTGACCAGGGTTTCGCTACAAAATCAACATGCCATACCTGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGAT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : TCTTCCCCACATGTGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 512456-513399 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFGF01000001.1 Klebsiella variicola strain 4300STDY6470483, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 512456 28 100.0 33 ............................ CTGAAGATATCAGGATGTTTATGGATAGAAGAG 512517 28 100.0 33 ............................ TCTCGGTTTGTGTATATACGGCGCTTACTGTGA 512578 28 100.0 33 ............................ TACAGGTCGCTTCAAAGTCTTTGCTGGGCTACG 512639 28 100.0 33 ............................ CAACTTATCGGTCGCGCTAAGACGCTTGAGCTA 512700 28 100.0 33 ............................ CACAGGCGGGCAGGCCTTAGACACTGGTGTTAT 512761 28 100.0 33 ............................ ACCGGAAGAACAAAAGGTTCTGGAAGAGGTTGG 512822 28 100.0 33 ............................ TCGTCTGAGCAGCGCCAATATTTCGAAATGGAC 512883 28 100.0 33 ............................ CGAGTGGATTACTGACGAATTTTCCGACCGTCT 512944 28 100.0 33 ............................ CACTCAGGTGGAAGCTGTTAAAGGTGGGCGATC 513005 28 100.0 33 ............................ TGCCGTATATCGCGTTTTAGGCGGTAAGCTCTA 513066 28 100.0 33 ............................ CACTCTTACTGGCCTGTGCCGTATCGCCGTGTG 513127 28 100.0 33 ............................ TCAAAACGACCTGGTTTCATATTAACCATCCCG 513188 28 100.0 33 ............................ TGGCGTTCTGGTCGATAAAGGCTTGTTTACTGT G [513210] 513250 28 92.9 34 ...............A.....C...... CCCCCGCTTTTGAGCACGCGCTGACATTCGTTCT 513312 27 85.7 33 ......A...T.T....-.......... TTGTGAGGGGTCTACCAGCATTGGCGTACTGGA 513372 28 75.0 0 ..............T......T.TAGCA | ========== ====== ====== ====== ============================ ================================== ================== 16 28 97.1 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTAATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTGTTCGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTATCTGATGCAGTACACGCCTGTGGAATCGGGCCTGATGCTTTTTCGCAGTATTCCTCAACCGCCTGGATATGAAATTCGCTACAAGGGGGAGGTCAGAAAGCCGATTATTGAGCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : ACTAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCTAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGCTACAAATTGGCTGGCTTGTTGGTGTGGATATCTCCAGGTGTTGGAGCAGTGACAGAAATCCATTTTACATCG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //