Array 1 680341-681498 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017267.1 Vagococcus teuberi strain DSM 21459 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 680341 36 100.0 30 .................................... ATTCAAGGAGCGAAACAATCGACTAGATAC 680407 36 100.0 30 .................................... TGTTAGATAGAATGGAAAATAGCTTAGAGC 680473 36 100.0 30 .................................... TGGGTTATATGGCGATTATAGTGAGCTGTT 680539 36 100.0 30 .................................... ATTCGACAATGGAATGTCACGCTAAACGAA 680605 36 100.0 30 .................................... TTATTCGGGTGCAATTACTGTATTAGTTTA 680671 36 100.0 30 .................................... TGTTAGATAGAATGGAAAATAGCTTAGAGC 680737 36 100.0 30 .................................... TTGATTACTGTTCTTTTTGCCATTTCTTGT 680803 36 100.0 30 .................................... ATCTGGATGGAATGAGTATGCTGGTACTGT 680869 36 100.0 30 .................................... TATAAATCCACGAAAATACGTTAATTTTTA 680935 36 100.0 30 .................................... CACCATCTAGTTCTGTAATAACTTTACCTT 681001 36 100.0 30 .................................... GCTGAATTTTGTTATTACACGAACATAAAC 681067 36 100.0 30 .................................... GCTCTAGCGATTGCGCTATTCAATCCACGA 681133 36 100.0 30 .................................... ATATACTTTCGCATGACTTCTCATACTATC 681199 36 100.0 30 .................................... CCATTTAGCCAGTAATAAAAACGGTAGGGG 681265 36 100.0 30 .................................... AAATCAATGAAGCTTATGATCAATTTCATT 681331 36 97.2 30 .........T.......................... AGTTTATGGTATTCATTTTCCATGCGAATA 681397 36 100.0 30 .................................... GGAGACGCTATTTAAAGGATTTGTGGTAAG 681463 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 18 36 99.7 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : ATCGATATTGAAACGAAAACAAAGATAGAGTTTTTAACAAATCAGATAACAACAATAATTTCAGATGAGTTGGTAGACCACAATCTAGATTTAATTATGGATGAGATAACTATACTAGAGCTATTTAAATCATTAGGCATAAAAATAGATGTGGAGCAAGGATCTATTTTTCAAAAAATATTGACGATTATTGAGGTTTATAAATATTTAAATAAGAAAAAATGTTTAGTTTTTATAAATGTTAGTGTGTATTTATCAATCAATGAAATGAAGTCTTTATTAGAATTTATTAGCTTAAATCAAGTTGATGTGTTATTTATTGAAAGATATGAGATGAAAGGCTTCTCAAATTATATATTGGATGAGGATTTTTATTTTTATAAGAATTAATGGTATAATAAATACAAATAGAGCTCTTTGAAAAATTAAAAATGAAGCATTTAAAACAAAAGACCTGCTATGAGTCTCTATAGTGCGATTACGAAATCTTTTTCTACGAG # Right flank : ATTATATACATAATTGAAATACCCCCAACAATTTTTATGATTGTTGGGGTTTTTTTGTTTTGTTGAATGATTTATTGACACCCATCAAAATTGCTTGTGTTAAGCCCATCGCGCAAAATAGTGTTGCTACAATAAAGGCGATGTTATATCCATGCAGAGTGGCAGATAACACGTCGGATTTATAAGTGAGTGGAGAAGTTAACAAAAGAGATTTGTGTGGCATATCTCTAAGTGTTGCTTGCGAGAGAAAACTAATGAGAATCGCTGTTCCAATTGAGCTGAATAGTTGTTTTGCTGTGTTATTTGTCGCAGAACCATGACTGATTAGATTATCAGGAAGAGAGTTCATACCGGCAGTAGTAACTGGCATCATGACCATCCCAACCCCGAGCATTCTAATACCGTAAATAATGGTAATAAAGTGCATGGGAGTTTTTTCATTTAGAGTACATAAACAAGCTGTCCCAAATGTTAGTAAACTCATGCCAATAATCGCTAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //