Array 1 132831-127827 **** Predicted by CRISPRDetect 2.4 *** >NZ_AYKH01000034.1 Salinisphaera orenii MK-B5 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 132830 28 100.0 32 ............................ GAACGCAGTCGTCAGATTCGAGACTCCCGCGC 132770 28 100.0 32 ............................ ATCAAGTGCTCCCCCGCTTGATGGGGCTTTTT 132710 28 100.0 32 ............................ AGAGACGCTCATGAGCGTGCACTGATCGCAGC 132650 28 100.0 32 ............................ AGCAGTAAAGAAATCCTTTACAACTGGCCAGC 132590 28 100.0 32 ............................ CTCCAAGGCATCGCCCACAGACGCTCGGCCTG 132530 28 100.0 32 ............................ GTAACGAGGCTCATGAGCACAAAGCAGAAATC 132470 28 100.0 33 ............................ AGGAAAAACCGACGCGAGACTCGAAATCTTAAG 132409 28 100.0 32 ............................ CAAGAGCCACGACCAAGACCGGCTAGAGCAAA 132349 28 100.0 32 ............................ TCGAGGCCGATGTGTGGGATTCAACGCGGTCT 132289 28 100.0 32 ............................ TGGAACCGCTCGTAGGCCCGTTCGACGTCCGG 132229 28 100.0 32 ............................ ATATTCAGTCGCGGGGTCGAGCTCGTCCTGAG 132169 28 100.0 32 ............................ TACGGCGAGGACGCCAGCCCGGACCGATCGAA 132109 28 100.0 32 ............................ AAGACGCATCGAATAACCCAACGCCCGACAAC 132049 28 100.0 32 ............................ TGATTATGATCCGTCCAGTCGGCCACGACGAC 131989 28 100.0 32 ............................ GGTAGGCCCACCCATACCCGAGTTTTTCCATC 131929 28 100.0 32 ............................ AGTGTGTCGAGTCGGCGCTAGATCACCATGAG 131869 28 100.0 32 ............................ GGATACAGCGAAAAGACCGCCAGGCAGCAAGG 131809 28 100.0 32 ............................ TTTGTCCTGCTGGTCGATGCCGAAACCGAGCG 131749 28 100.0 32 ............................ AGTGGCACGCCGTGTCGAATGGGCGGGTGAGC 131689 28 100.0 32 ............................ TAACGATTGTCGCCGCACCTTTTTCAGATGAT 131629 28 100.0 32 ............................ ACGAATTTGTAGGCATGTGCCATATCCCGCCC 131569 28 100.0 32 ............................ AGCACGCCGTGTGGGGCCGTCCAGGGGCGATA 131509 28 100.0 32 ............................ ATCCGCAACAGCTCCAGTGGCGATGCCGAGGT 131449 28 100.0 32 ............................ TGCCACCCCGGCGCGCACCGCCAGCTGCTCGC 131389 28 100.0 32 ............................ ATTCTCGCGAGCCTCGGCATCGGCGTGGAGGG 131329 28 100.0 32 ............................ TTGGCGAGGGTCGCGGTGAACGGTAGATCGCG 131269 28 100.0 32 ............................ GTACCCCGGATCTCGAGCGGTCGCGGGCATGA 131209 28 100.0 32 ............................ TTGTTCCGCCGTATGGCCTCCGCGTCCTGAAA 131149 28 100.0 32 ............................ ACGAGACGGGCGATATCCGCGGTCAGCTGGTC 131089 28 100.0 32 ............................ GGCCGCGATGGCGCAGGGCCCCGCGGCAGTCC 131029 28 100.0 32 ............................ ACGCCGGCGCGCCTCGTCGGCCATGAGTTGCA 130969 28 100.0 32 ............................ GAACATTACGACCGCGTCCGGCGATTCATGGA 130909 28 100.0 32 ............................ ATCGCATTACAGTTCGACCTCCGAATCGGGGC 130849 28 100.0 33 ............................ CGAGAATCTTCTTGCTGCCCGTGACGTACGGTG 130788 28 100.0 32 ............................ TGAAACGCGCCGCCGATCAGTACGCCGCCGAC 130728 28 100.0 32 ............................ TGCCGCGCCGTCGAGGATGCCGTAGGCGGCTG 130668 28 100.0 32 ............................ ATCGCCTGGAACTGCTCGCACAGGTGCATCGA 130608 28 100.0 32 ............................ AAGGTCATTGTCGGGCGTCGGGCTGTTCGAGC 130548 28 100.0 32 ............................ CTGTTTGCCGACAAACTCCAGATCATCGACGC 130488 28 96.4 30 ...A........................ GAACCGCGCGGAGCTGATCGAAACGCTGGT 130430 28 100.0 32 ............................ CTGTGCGGCGGTGGCAAACTGTTGCTGAAGCG 130370 28 100.0 32 ............................ AGCGCGTTACGCTGGAGCTTCTGCCACGCGCT 130310 28 100.0 32 ............................ TTGGCGAGAGCGGCCACGGCGTCACGCTCTTC 130250 28 100.0 32 ............................ TGCTCGGACACATGGACCCGCGAACCCTGCAG 130190 28 100.0 32 ............................ TAGTCCGCATGCGCCGCGACCAACTCGGCGCC 130130 28 100.0 32 ............................ ATGAACATCGAACGCATGACCGCCGCCGCCGG 130070 28 100.0 32 ............................ TGCTCGTCTTGAAAATCGATGAACGGATACGA 130010 28 100.0 32 ............................ GGGCCGGGTAGCGCGGGGTGCTTGTATGAGTC 129950 28 100.0 32 ............................ TGAATGTCTCGCGATCTGGTCGCGGGTCCGAG 129890 28 100.0 32 ............................ TTAATAAAGGTGTTGACGTATTCCCATAAACG 129830 28 100.0 32 ............................ TCTAAATTGTCTGCTGAGATCGCTTTGTTGGT 129770 28 100.0 32 ............................ AAGCCGTTCTGTCCGACGACAATCCGATCGGG 129710 28 100.0 32 ............................ ATGCGCTTGCCGGCGTGGCCGGACAGGGCGCC 129650 28 100.0 32 ............................ TCGAGCAGTTCCCCCAGCTGCTTGTGCATCTC 129590 28 100.0 32 ............................ TGACCGACGGCGAGCTGGAGGAGATGTCCGGC 129530 28 100.0 32 ............................ AGCCGTTGGGGCAGTGAAAGCCCCATTCGCGC 129470 28 100.0 32 ............................ CGGACCAGATCGGCCCGGGGTGCGAGTGATGA 129410 28 100.0 32 ............................ AGCTGCGCGACCCCCTCGCCCATCCCCGTGCA 129350 28 100.0 32 ............................ GGACCGACTACTGGCAGACCGAGCACGCCCAG 129290 28 100.0 32 ............................ GTCACCGCCAGGGTGTCCTGCCAGACCGGCGA 129230 28 100.0 32 ............................ TTGATGTCGACGGCAGCCACTATCGGCATGTC 129170 28 100.0 32 ............................ GACACGACGATGAAATCCGAGACGCCGTAGGC 129110 28 100.0 32 ............................ GACGGCTGGCTCTACCACGTGACGTATGACGG 129050 28 100.0 28 ............................ AAGGGGATTCGAACGATTGCCAGCGGTG 128994 28 100.0 32 ............................ AAGACCTGAGCGACGAAATCGACCTGATTTCC 128934 28 100.0 32 ............................ AACACCCAAGGAAACGCCCCGGAGTTCACCGC 128874 28 100.0 32 ............................ GTCACCGGGTCATACCCGATGCGCGCCACGTC 128814 28 96.4 32 .........T.................. AGCGTCCCCGGCGAGTTGCGCAAACGCGGCCG 128754 28 100.0 32 ............................ TCCGAGTTCAAAAAGCGGCTGCTCGGCGTCTC 128694 28 100.0 32 ............................ AGCCCGTGCAGGAAATCAAATCTGCACTGTGA 128634 28 100.0 32 ............................ ACGGATTCGCTGCGGCTGCTCCGGCTGGCATA 128574 28 100.0 32 ............................ TGATCGCGCTCTCGATGCTATTGACCGCATGC 128514 28 100.0 32 ............................ AGCTGGCGGGCGGTCAGCAGATCAGGCATGGC 128454 28 100.0 32 ............................ AAGATGGCGCAGCTGATCTTGAGCCTGCATTC 128394 28 100.0 32 ............................ TCCACGTGCGCCGGCAGGCCGGAGACGGCGCG 128334 28 100.0 32 ............................ GGCACCGTGAGCGACCCCGGCGCCGTGATCAG 128274 28 100.0 32 ............................ TACCACTCCGGCGCGAGCGCCCGCGAGCTCGC 128214 28 100.0 32 ............................ TGCACCGCGATCACGGTCACGCGGCGCGGCAG 128154 28 100.0 32 ............................ TATTGCCCGGCGTTCGAGAGCGTATCCGACGC 128094 28 100.0 32 ............................ TTGCGCTCGATCGCGATGGTGGTGGTGGTGAC 128034 28 100.0 32 ............................ AAGGGGATTCGAACGATTGCCAGCGGTGGTTC 127974 28 100.0 32 ............................ ATCCCGCGCAACCGCGTCTGCAACATCTACCT 127914 28 100.0 32 ............................ GATTCCGGCCAGCCCGCGTCCCACACGCGCAG 127854 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 84 28 99.9 32 GTTCGCTGCCGCGTAGGCAGCTAAGAAA # Left flank : AGACCTGGATTCACTCATGGCCACCGCCTGGCTCGGCGGCATGCGGGAATACGCCGAGATCGGCGAAGTAGCGCCGGCCCCTGCGGATGCTTCACACCGCACCGTATCGCGGCGGCAGTTCAAGACCAATGCAGAACGTCTGCGGCGACGGCGTATGCGCCGGCACAACGAGTCAGAAGCCACCGTCCTGGAACGCATCCCCGACAGCGTCGAACAACGCGTGTCACTACCGTTCGTACAGATACGCAGTACAAGCACCGGCCAACGTTTCAGTCTGTTCATCGAGCACGGCCCCGTTCAGCCGAATCCCGAACCTGGCCAATTCAACACATACGGGCTCAGTCGTGGCGCGACCATCCCATGGTTTTGACCCTTTTTCTCAGCGTCCAAACGTATAGTCTATAAATCAGTCACTTGGCGCTTCCCCGATAAATAGGGGGAAATGCGCCTGTACTGCCGCCGTTCTTTAAAAATCAATAGCTTGTAAATATATGTCTCTA # Right flank : AGCGCCTCGTGACGCAGGAGGCCGAGCCGGACGTTCGCTGCCTGAAAATCTGCAATTGCACGTCCGTTGGTGCTGCCGCTCACACCCAGCGGCCGTGCCTTTACCTCACGACACGTTACTCCGCGCGCGAAAGTGCTCGACGCCTTCGATCACGCCGCGGGCGTGGTCGGCTCGGGCGAGGTAGGCGTGGTCCAGGCCGGGGACGGTGGTGAGGTCGTCGCGGTAATTGGCGACGATGATCGCGCAGGGCAGCGCGCGCAGCATCTCGATGTCGTTGCCGGAGTCGCCGGCGACGTAGACGCGCGCGTGCGGGATGCCGTGGCTCGCGGCCAGATGGGCGACGGCGCCGCCCTTGGAGGCGCGTGCGGGGAGCACGTCGACGAAGCGGTCGTGGCTGTGGATCACGGTGGCTTCGATACCGCGGGCGGCGAGCACGCCTCGTATCTTCGGCGCGATCGCGAGGCCGCCCGGGCAGAGATAGCTGATTTTGTGCCGACGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //