Array 1 2478646-2476251 **** Predicted by CRISPRDetect 2.4 *** >NC_016627.1 Acetivibrio clariflavus DSM 19732, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 2478645 37 100.0 36 ..................................... AGATATAACTGAAAGTATTTGAGGCCTGTTGCTGCA 2478572 37 100.0 38 ..................................... TCCATAGCTTCAGGACATATAGCTATAGATAAATATAG 2478497 37 100.0 37 ..................................... ATAATATATACTTTTCTGTATCAGGAGGGAAAGACAG 2478423 37 100.0 36 ..................................... AGTTTGCTCCAAGCTACTTGTAGGGGGTGTATATAT 2478350 37 100.0 36 ..................................... AATGCATGAATTTCGTCAGCAATTGCTATGTTACAG 2478277 37 100.0 37 ..................................... GCCTGGACAGTTTGGCTTTTGCTTTTTGTCAATTTCA 2478203 37 100.0 36 ..................................... TATCTTGCATCACATAAAGAATCCGCCAAAAGAGGT 2478130 37 100.0 36 ..................................... TCCTGAACAAATATTTTCAGATAGACTCCATCATCA 2478057 37 100.0 35 ..................................... TTGCTATCTTCCCAAAGTTTTCTTTGTTCTTCTTC 2477985 37 100.0 40 ..................................... ATGCTATACGACAGAGCCTAGAACTAGGAGGGCATCCTAG 2477908 37 100.0 39 ..................................... GCATTGATGGATATCCGAGATAAATTAAGAGAATTGCAG 2477832 37 100.0 36 ..................................... TAAACAAACGTGGATTCTTAGGGAATTCGTTAGGTA 2477759 37 100.0 36 ..................................... AGTCGTCGACATTTGTTCCTGTAGTTCCAAAGCCCC 2477686 37 100.0 36 ..................................... AAAACTCTTCTTGAGTGATTTCGTGGAGTTCACAGT 2477613 37 100.0 35 ..................................... GAGAAAATGAAATAAATCTTTCGCAAATAGTAAAT 2477541 37 100.0 36 ..................................... CTTCTTGCCATAAAGCCGCTAAACCTTCCGCAATTG 2477468 37 100.0 35 ..................................... TATTATAGGGCAAGATAAAATTGATCGTATGTGGT 2477396 37 100.0 39 ..................................... CGGAAGTTGACAACTTTCGGTTTGAGGTGGCTGGCGATA 2477320 37 100.0 36 ..................................... AAGGCGGTGAGTGTAGATGATTAACTGTAAATATTA 2477247 37 100.0 36 ..................................... ACAACTCATCAAGATTTTTGCGCAACTCGATGATGA 2477174 37 100.0 36 ..................................... CATTATCCCAACACTTAATTTTTCGGGGAGAATCTA 2477101 37 100.0 36 ..................................... CCAAAGGATTACATAAGTGTATCTCAAATCAACATG 2477028 37 100.0 36 ..................................... AGAACAGATATACCTATATACGTGAAAATATAATTA 2476955 37 100.0 38 ..................................... TTACAATGCTGTTTTTCGTTCACTTTCGGTATAAATTG 2476880 37 100.0 37 ..................................... CTCAATTTCAAGGCTCTTCAATGCCTCCACTAATATG 2476806 37 100.0 40 ..................................... CTTGCATACAGTGATAATTTTACCGACAAAGGAAGACCTT 2476729 37 100.0 36 ..................................... TAAAGTTTGGAGGTGGTTGCGTGGTCAGGCACAGGG 2476656 37 100.0 36 ..................................... ACAGCTTATTGGCGGTCTCCACACCTAGATTCTCTA 2476583 37 100.0 37 ..................................... TATAAATAAGACTCAAACCAGCTACTGTAATCAGCTA 2476509 37 100.0 37 ..................................... CCCTTTTCTCGTATCGCGTCATATTGTCCCCTCCAAA 2476435 37 100.0 38 ..................................... TCTGTTATTTCATAAGTTTTTTCTGGGGTATACTCCCA 2476360 37 97.3 36 ................T.................... GAAATCTTCAAGACCTTCTTCAAGAATCCAATTCCA 2476287 37 91.9 0 .............................T.AA.... | ========== ====== ====== ====== ===================================== ======================================== ================== 33 37 99.7 37 GTTGAAGTAGATGTTCCATAAAAATAAGGATTGAAAC # Left flank : AACAAAAAAGCCGGGAAAAGAAACTGATAGTATAAATAGATTAAGAAGTAAGGTTGATGTAAGAAATAATAGTATTTTTGCTCATGGTTACGAGTTTATAAGTAAAGAAAAGTATATGGAGTTTAAAAAAGTGGTTGAAGATTACATAGATTTACTATGTTCTATTGATTGTATAAATAAGGAGGAAATATTCTCAATTTGTAAGTTTATCAATCTCTAGAAAAATTTGAAATACAAAAGTATTGAATCTATATATTTATTATGATATGTTGGAATAGGAGATAAAATATTATGGAAAATTGTGGCTGAAAAATTATTGAAAAATTTTTATTAATATGGTTGTAGGTATTGAAATTACTGAGGTGTAAGCTTGTGTTGATAACTCAAAAATGTATAAAAATATGTAAGAATTTGCCGATTTATAATAGGAGAAGCTCAAAAAAGTTCCGTCAAAAAAATCTTGTAAGCGTTAATTTTTAAGCGATACAGCTTTACGGGCT # Right flank : TGTCCATATACCATTAACTATTAGTGATGTAGACGATACATCAAACAGATTCCGAAATCAAAAAATGCTTTTGGAGGTGTAAAATGAAGCTGGTGCTTAACACACCGGGCCTTTATCTTTGCAGGCGGGGAGAGTGCTTTCAAATCCAGGACAATAATGAGAAGAAAGAAATCGCTGCTGCAAAAGTGGATCAGATTATGATTACAACTCATGCTGCTATGACCACTGATGCAATTGAACTGGCCCTGGAGAATAACATAGATATAATATTCCTGAAAAGTACCGGTCAACCGATGGGAAGGGTATGGCATTCAAAACTTGGAAGTATAAGTACCATAAGGAGAAAACAGTTATTTCTTCAGGATAGTCCGTTTGGGTTGTTACTTATAAAAGAATGGCTGGTTGAAAAAATGGATAACCAGATAAAATTGCTTAATAAATTGGCAGCAAACCGTCGTGATGAAGAACGTCGTAAAATAATAAAAGATGCTTTGGAAAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTAGATGTTCCATAAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.10,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 2 2502079-2496167 **** Predicted by CRISPRDetect 2.4 *** >NC_016627.1 Acetivibrio clariflavus DSM 19732, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2502078 37 100.0 38 ..................................... TCGTGATAATGTTCGTAGATATTATAAGCCTGAGAAAA 2502003 37 100.0 40 ..................................... TGCTATGTTACAATAATTATGATGGAATTTTCATATTAAT 2501926 37 100.0 36 ..................................... TTGAGAAAATATGGAAGTGCAGGGAAATATCGAAGG 2501853 37 100.0 37 ..................................... TACAATTGACGTGCTTTCGCATCAAGTTCTACATACA 2501779 37 100.0 38 ..................................... ACTGGCGGAGCTCTTCGAGCTCTTTTTGACGAGCTGCT 2501704 37 100.0 37 ..................................... TCTACATTGGAATAAAACTGTACAATCATCAGGTCAA 2501630 37 100.0 36 ..................................... TTTTTGAGTTCATGTAGGGAAGCGAAAGCAATGAGC 2501557 37 100.0 38 ..................................... TTCCGTTAACAACATCTTTTAATACAGCCCTATATCCA 2501482 37 100.0 37 ..................................... TTTGCGAGGCCGATCCTGATGAGAGTGGCAACATAGA 2501408 37 100.0 36 ..................................... GTGATTTTGCGAAAAAATCTTTTCTTTGTTGTGGGT 2501335 37 100.0 36 ..................................... TTATGGACGCGTAACCTATTATATATAATAGGTTGT 2501262 37 100.0 37 ..................................... TATTGAGCTTCTAAATCAATATAAAGTACATCTATTT 2501188 37 100.0 38 ..................................... ACTAAGGAAACGAAAAGATTACCCAGATTATTGAGGGG 2501113 37 100.0 37 ..................................... AATTGTTCTGCTAAAACCTTGTTATATGTTGCATGTT 2501039 37 100.0 36 ..................................... ACTTCTCCGTCATCTTCCACTTCCTTTGTATACCAA 2500966 37 100.0 37 ..................................... TGAGGTGTTTGATTGAGATAATGATGCGCGCAGTTGT 2500892 37 100.0 37 ..................................... GTCACAGTCTATAAGATACCTTCTTATCTCTTGTGCA 2500818 37 100.0 41 ..................................... AACAATTGCTAGTGCTGTATTTATTGCTATACTCACTCCTT 2500740 37 100.0 37 ..................................... TCCAATTTGCCAACTGTATAAAATTGTAAATGTCAGC 2500666 37 100.0 39 ..................................... TCATAAAGGTACCGAAATTGTGAGGTTTCACGAAGCATT 2500590 37 100.0 36 ..................................... AAAATTTTTGTAAAATCAGGTGTTTTTCTGTTAGTA 2500517 37 100.0 40 ..................................... TTTAACAATGTAGAAATCAAATTTTTAGCAGTTTCTTCAA 2500440 37 100.0 38 ..................................... GGTACAAAGAAATAATTTCCTTTGCTTACGTTGTTGGC 2500365 37 100.0 36 ..................................... TATTAAATATGGCAATTATGACGAAACTAAAAAAAC 2500292 37 100.0 35 ..................................... TTCCAGCCGAGATGTTCTCAGTCGAGCAGGTTAAG 2500220 37 100.0 35 ..................................... TCTGCTTGTTGAAAGAGCAGGAGCAAATTTATCGT 2500148 37 100.0 37 ..................................... GCTGGAGATCCAGTAACAAATCGCATGGTCGAATTTA 2500074 37 100.0 38 ..................................... CAATATGGTCAAGGAATATTACAAAAATATGGAGAGGT 2499999 37 100.0 35 ..................................... ATGCCATGATGGCTTTACATAGATTCACGCCCCCG 2499927 37 100.0 38 ..................................... AGCTGCCCGTACTCACTGTAAATATGCCTGTTATATTA 2499852 37 100.0 35 ..................................... CCAGATATTGTAACCTCTTTTTTTCCGTAATTTTT 2499780 37 100.0 35 ..................................... AAATATCATCTAAATATAACTCAAACCAATCTATA 2499708 37 100.0 37 ..................................... TTGAGTATCTTCCATTCATTTGGTTGCAGAATGCTCA 2499634 37 100.0 38 ..................................... CCTGCATAAACGGACATCTTTACACTTAATGGCAACCC 2499559 37 100.0 40 ..................................... CTATCTTCTGCTATTGCATTGTATCCCATTTCTGTAATCA 2499482 37 100.0 39 ..................................... AATATTTTTCAACCTTTGCTTTTTCTTGTGAATTATCTA 2499406 37 100.0 36 ..................................... TGTGCTTTTTGCAAGCAACCCCGCCGCTTTGTGTTT 2499333 37 100.0 38 ..................................... TTCAATAACCTGTATTTTTCTTGTTTAAATCTCTCTTG 2499258 37 100.0 40 ..................................... TCGGGTCTATGGATGGTACGCCAAAGATTTTCCAAATGTT 2499181 37 100.0 36 ..................................... AAATGTCAAAAAGAATATTTGAAATTGAAAAAACAG 2499108 37 100.0 37 ..................................... ATTTTATCCCTGTTAGCATTGAATATCTTGGTATATT 2499034 37 100.0 37 ..................................... GGGATAAACCCTGCCAGCACCTCCTTGTGCAAATTAA 2498960 37 100.0 39 ..................................... CTTTTTGGCTTAAACAGTTTTGCAATGATAAAAAATTAA 2498884 37 100.0 40 ..................................... AAGAAGATGGATCTCTCGACGAGGGTTTTGAGATAGTATC 2498807 37 100.0 39 ..................................... ATCTAAATTGACAAATAGGTTAACAATCGGATTAACACG 2498731 37 100.0 36 ..................................... TTAAAAGAGGTGATTGTATGTCTAATCTCAGTATAT 2498658 37 100.0 39 ..................................... TAAAGCATATACACCGTATTCAACAGATAATATAACTCC 2498582 37 100.0 38 ..................................... CTGCATCAGTTAAGCTTCCTAACTTATCACTTATATTC 2498507 37 100.0 36 ..................................... GCAGCGGTAATTCCGCCATTATTTCCTCAAGTTCGT 2498434 37 100.0 39 ..................................... ACTAAATATCTATTAGATTTACAGGCAAAATATCCTAAA 2498358 37 100.0 36 ..................................... GCAGCGGTAATTCCGCCATTATTTCCTCAAGTTCGT 2498285 37 100.0 39 ..................................... ACTAAATATCTATTAGATTTACAGGCAAAATATCCTAAA 2498209 37 100.0 37 ..................................... AGAGTGAGGATATGCAAATTAGAGATGGGACTTTTAA 2498135 37 100.0 39 ..................................... ATAAAGTTATTGTAAAGGTAAATCAGCTTATTAATGCTG 2498059 37 100.0 37 ..................................... AAACATATTACTTCATATATTCTCCTTAAAAAAGCCT 2497985 37 100.0 37 ..................................... GTTACGGTCAGCTCCTCAATCAGCACAAGGGTGTTAA 2497911 37 100.0 39 ..................................... TATATGGCTTGCTTTAATGCTCCTAATCCGTCTACAAAT 2497835 37 100.0 39 ..................................... AAAACATAGCCGTAGAAAATATTTGCACCATCATACCTG 2497759 37 100.0 36 ..................................... ATTATGATCCAGATATTATATCAATTATTAAAACAG 2497686 37 100.0 36 ..................................... CTAGTGAGTGTGAGTCTCACAAACTTCCATAATATA 2497613 37 100.0 36 ..................................... ATGCCTTCGATGTCTTTTTTTCCTGCGTATACCGTA 2497540 37 100.0 36 ..................................... TTCGCAAATTAAACATCACTTGGTTTGGAGGTTCTG 2497467 37 100.0 36 ..................................... CGAGTTCGGACAATCTGTTAAACCATTCTTCGCCGA 2497394 37 100.0 38 ..................................... ATAACCTTAAGTTCTTCCTTGATTCGGTCTGCATACTT 2497319 37 100.0 37 ..................................... TTAGATATAACTGACCCTTATACAGCGTATTGTTTTG 2497245 37 100.0 37 ..................................... AGAAAGGAGGGTGCCATAATGGCAGGCAACAAGTTAA 2497171 37 100.0 38 ..................................... TCTTTCTTGCAATGTCTCCCATTTCTTTGGCATCTATT 2497096 37 100.0 36 ..................................... TAAAATAGTCCATTGCCTATAGGTGTCGCTGTCTTG 2497023 37 97.3 38 .............T....................... TAGAAGAAGTTGATGATTTTGGTTCTCATGGTGGGAAA 2496948 37 97.3 41 .............T....................... TTTTCTTGTAATATCTCAATGTTTTATATGTTATATTAATA 2496870 37 97.3 36 .............T....................... TTTTTTTTATAGACGGTATAACAGCAGACCGTCAAT 2496797 37 97.3 39 .............T....................... TAAATATATGGGTCTGTATTATTCCATTTTTCTATTAAT 2496721 37 97.3 36 .............T....................... CAATTGCTAGAATAGGAAATAACTTTGCAGGCGAAC 2496648 37 97.3 36 .............T....................... TCAAAATAGCCACGGCGGTTATATTGGGATTGGCTG 2496575 37 97.3 36 .............T....................... TTTATTTGTTGATATAATGCATAAGTAACTGCTGTA 2496502 37 97.3 36 .............T....................... TCATAATTACCTACAAAGCTTTGCCCTTCAAGATAC 2496429 37 97.3 38 .............T....................... ATAAGTGCGACTGGAAATCGTGTGTACGTGATGAGCGT 2496354 37 94.6 36 .............T....A.................. ATAACAGTTGCCAATGCTGTAAACTCAAGGTCAGCA 2496281 37 94.6 39 .............T.....C................. ACACCTGACACACGCGGCGCTTAGGTCGTAGTACACATC 2496205 37 83.8 0 ..........T.T...........AC....C.T.... | T,G [2496169,2496176] ========== ====== ====== ====== ===================================== ========================================= ================== 80 37 99.4 37 GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Left flank : ATTCCATAAAGGAACTTTCCGACAAGGTTATCAACTCACCCATCTATCCGTCGCTTTTAAAGAATTTGATTGAAATAGAGTTCTTTTTGATAAAAGCAGAAGTGGACAGGGCAACTAAAGTGTTGACGGAGTATAGGGATATAAAGCCTGTATTTGTAAATGCAATTAAGGAGCAGAACAGGATATTGGAGGAAAGCCTTGAAAAAATCAGGAGATTTATGGAGGAATAGGAACAGAGAAGTTGAATATATAGTTAAATTGTGATATGTTAAAAATGAAAGAGATGGGTATATGGAAATATGTGGATGCAAAATTATTGGGAAATTTGAAGTCACAGGCTTGTAAGTATTGAAATTTGGGGGTTATAAGCTTGTGTTGATGATTAAAAAATGTGATTTTTTATATGAAAAAATTGTGTTTTGCAATAAAATTAGCTCAAAAAAAGTCCGTCAAAAAAAGCTTGTAAGGCTTGAGGTATGAAGGATTAAGCTTCGCGGACT # Right flank : TTTTCTGGTACTCAATAATCTTTTATCTTTACAAAACTTACGTAAAAAAATAAAAAATTCGAAGCAATTTAAAGATAAACTTGCTATTATATAAATGAACAAGTAATTAAAGGATTGAAAGAAATCATTATATATTTTATTCTTTACAGAAATAACACATATTTTGAAGAAAAATGTAATTTGTACTTGACAAAACTTATCAAAAGATGTAATATGATTATATGAAATGCAAAATATTACTGCTCTGAGAGAAGGTGTCTTGTTGCTTACGGGTATATTGCAGATAGGAGAGTATGTACTCAATAGCAAAAGCGTCGAAGCAGATGATTATATTCAAGTCATTGAGAATCCTAATGAAAAAGGAAACTACAGGCACGTCTTAAAAATTGGGTTTAACTTGAATGAACGGAATGTTGGTTATAGAGGTATCGAGTATGAAGAGTTCTCGGATAAAAAGATAGTTAAATACGCATACAAAAAGGGAAGCGCCAGAGGTGGAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTAGAACATCCAGTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 3 3016571-3020204 **** Predicted by CRISPRDetect 2.4 *** >NC_016627.1 Acetivibrio clariflavus DSM 19732, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 3016571 29 100.0 36 ............................. ACCGACTTCGAAGTTATACTGGTCGTTTTGACAATG 3016636 29 100.0 35 ............................. TGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAG 3016700 29 100.0 36 ............................. GTTGACAGCTAGCACTAGTTATAATGTAATAATTGT 3016765 29 100.0 36 ............................. GAGCAATGGAAAAACTGCCTCGAACCTCATAGATGA 3016830 29 100.0 38 ............................. TCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACT 3016897 29 100.0 36 ............................. TAACGGATTAATGAAAACCCCGAACTGTTGGTATAA 3016962 29 100.0 36 ............................. CGGATATGTGCCATCCTTGACCTTCTCCCAGACATC 3017027 29 100.0 38 ............................. TTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATC 3017094 29 100.0 35 ............................. GTACAGGAGTAAAAATGCCATTGGGTATAGCTACT 3017158 29 100.0 35 ............................. TTAACTTATACAAAATTAAAAGACTTTCCAAATGG 3017222 29 100.0 36 ............................. TGAAAAAGTATCAGATATGAATATTTTAATACAAAA 3017287 29 100.0 35 ............................. GGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTA 3017351 29 100.0 35 ............................. TTAATTTCAATCATCTCCTTTTTTGTTATATAATA 3017415 29 100.0 36 ............................. TGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAA 3017480 29 100.0 39 ............................. GGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCAT 3017548 29 100.0 40 ............................. TTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGA 3017617 29 100.0 35 ............................. GAAATTGTTTTTGTAATCAACCAATATGATTATTC 3017681 29 100.0 36 ............................. TTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTT 3017746 29 100.0 37 ............................. GTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCC 3017812 29 100.0 36 ............................. GAATATGTTGGAGATGGTTATACAAGCAGTTGAAAA 3017877 29 100.0 35 ............................. TGGCTTGTAGCAAAGTCATATATTCCAACAATATC 3017941 29 100.0 37 ............................. CTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATAC 3018007 29 100.0 36 ............................. CAACCATCCACACTGTCGACTTCTCGACCAATCCAC 3018072 29 100.0 37 ............................. TATGATGGTACAAAGTGGTTCTTATCCCAATATGATA 3018138 29 100.0 36 ............................. GCGATATAGTCAACACCCTTCGGCGTGACGAATGTC 3018203 29 100.0 35 ............................. GACCCTATAAAAAGCATAAGTTCATATTCATTTTC 3018267 29 100.0 35 ............................. CAACATAGATTATACAAATCCGAAGGTCCACGAGA 3018331 29 100.0 37 ............................. TAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAAT 3018397 29 100.0 36 ............................. TATAGAATAGCTTTGTCTACTGCAAGGCCAATAGAC 3018462 29 100.0 36 ............................. GTATTCGTTCTCAAAATCATAATCAATATTCTGCGT 3018527 29 100.0 38 ............................. TCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAAC 3018594 29 100.0 36 ............................. CGGTACCAAAGCCGTGACAGTGATACCGGCATGCCA 3018659 29 100.0 36 ............................. TTTAGAAAATAAGATATATTCTTTAATGTCTAAGTT 3018724 29 100.0 36 ............................. CGGCCCAACTGAATGTAACCAGTCTGAACTCATCTA 3018789 29 100.0 37 ............................. CTTTGAGTCCTACAGATACGCTTGAAGTTACATATAT 3018855 29 100.0 36 ............................. AAGGGATAACGGCTCAGGAGGCAGAGAATATTGACC 3018920 29 100.0 36 ............................. ACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGG 3018985 29 100.0 38 ............................. GGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGT 3019052 29 100.0 36 ............................. CTTAAATTGTTGTCATAGATGTACTTCCAAATGTCA 3019117 29 100.0 36 ............................. TCATATTTTATAAACGCAGTAAAAAAAGCCTGCACA 3019182 29 100.0 36 ............................. TCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTT 3019247 29 100.0 37 ............................. GACAACCCTAAACAAATGGAAAGTGATGCCCAAGAAT 3019313 29 100.0 38 ............................. TCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGT 3019380 29 100.0 36 ............................. CGTTATATGTATGCAAGACAACGATAAAGGTTATCT 3019445 29 100.0 36 ............................. TTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAA 3019510 29 100.0 40 ............................. AGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTAC 3019579 29 100.0 36 ............................. TTGATGTCAGGTTTATACTGCAGAACGGAGAAATTC 3019644 29 100.0 36 ............................. GAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACA 3019709 29 100.0 38 ............................. TGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTT 3019776 29 100.0 38 ............................. GGAGTAGCATGGAATAATGGATATAGAATTTCTTCGAC 3019843 29 100.0 39 ............................. CTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAAC 3019911 29 100.0 36 ............................. TTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATT 3019976 29 100.0 35 ............................. GAGCCACCAGCACATACAAAACCTACACCATCAAG 3020040 29 100.0 43 ............................. AGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCC 3020112 29 100.0 35 ............................. CTAGACGATATTGATATTTATACAGGTCCTGGTCC 3020176 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =========================================== ================== 56 29 100.0 37 ATTTACATCCCACATAGTTAAAGAACAAC # Left flank : ATATTCTTCATCTGTTACCGGTACTGGCTTGTACGATTAATACCTAACAGTTCAGCTTGCCTTTTTATGCTTAATTTCTTTTCTTCTCTATCAATCATCTTCATGCGGTCTTCCCGGGACTTAGAATCGGCCAGATTTTTTTAGCCAGGCAACTTCATATGTAAATTAGCCAATTTGCTTAAGCAGTTCGTCCTTCTCCTTTTCATACGACTGTTTGACCTTCTCTACTTCATCAGTTTCCTTACTGAAAACTCTGCCTGCATTGCTTATGAATTCTGCCTTCCAGCGACTTAACTGATTAGGATGAATTTCATATTCGGCAGCTATCTCATTCAGCGTCTTTTCTTCCCTTAAGACCTCAATCACTATTTTTGCTTTTTCTTCTGGTGTAAAATTTCTTCTCGTTTTCATAATTCTATTCTAACTTATTTTGACCGTTTTGTCTGTCTTAATTTATGGTATCATTATAGTCTGCAAGTATTAATGCTTTCTGTGCTATT # Right flank : CCCCATTTTCAACAATTCTAAAAAGCTCTATTTTATCCCTTTTTTATAGGATTCATGAGCCTTGAAATCAAATAAAACTGCAGTAATCTTCCAATAATGTTTTCATAAAAAACTCAAATATGCTTCCTAGCATCTGATTTTAAAATGCTACAAGTAAATTTTATAAAAATCCGGTTTGCTGCAAAATTATAATATTAATTCATCTAAAGCTTTTTCTTTTCCAATTTTAATTTTATTAATATTTTTTGGAATTTCTACTACATAGATATATATTGAATCCTCATTTTTGTCAATAATTTTACCAATCTGTCCAATACATTTCTGCAACTTGCCCTCTGTAATCTCTCCCTCAAAAACTGAATTTTGTGTCCAAATTAAATATTTTTTTAGTAACTTTCTTACTTTATTAACTTTCTTAACTTCAACATCATATGTCAATACAACAAAAATATCTACCACCACGCTTTCAAGGGTTTATATATTTCATCATCAATAAAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATCCCACATAGTTAAAGAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //