Array 1 2350791-2350424 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LT907782.1 Nitrosomonas ureae strain Nm15 chromosome I		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
   2350790	    37	 100.0	    29	.....................................	TCCGGGCGGCTTCTTGAGGTTGTGTTTAC	
   2350724	    37	 100.0	    29	.....................................	GAGCAGCACCGATAGCCGTCAAGCTGTTA	
   2350658	    37	 100.0	    29	.....................................	TAACTGCGCGGATCGTATGCCGCCTGATG	
   2350592	    37	  97.3	    29	.....T...............................	TGAGCCATAACGATGGAAGGGAAGGGTAG	
   2350526	    37	  97.3	    29	.....T...............................	GTTCTTTATGCTGTTCCGTCAACGGCCGA	
   2350460	    37	  94.6	     0	T....T...............................	|                            	
==========	======	======	======	=====================================	=============================	==================
         6	    37	  98.2	    29	AGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACT	                             	       

# Left flank :   CCAAGACGCCAATCGGCGCAAGTAGGATTGCGTAGCTGTGCTCTACACCCCTCGACAACCACTCTTTAAGCAACTCCCCGACACTACCTGAAGCCACCTGGGCTATCAGCTGTAAATCAACCGGAGAACCGGGAAAGGTCATGATCAAATTATTGACAACACCACACGGATACTAAAAAGGAACCCGGCACATTTAAAGGAAGAGAGCAAAATGTGCCGGGCAAGTGATGCGTGAGGGCTTATGTTCACGCAGCAAGGAAGAACAAGAAATGTAATTTGCTACCATCCGACTACGCGAGAGAATGCGCTGGTTGCTGCGGTATGCCAATCACTAATTGATGGACAGTACGCATATTACACAATAATTTTTACAATTGCAAACGATTCTTATTATCATTATCAGATAAATTCGTATAACTAATGTTGTCCCTGCTTTGCTTGCTCGATTCAGCCATATTTTGAATACTCGTACTGTCATTCACAGAACCCATTTATTTCCA
# Right flank :  AGCTGTACATTAACCCCATGATTATTAGAGGAGTTAATGTACATGCCAGTGAAGAAACCATAATATTTGTCAGAAAAGTTCATATTGTTCGGGTGATTTTTTGCTTGCTTGTTTGCTTTTTCCGCGAAAAGTAATGATGCGTTCGTATTGCTTGTCGGTAAATTGCAGGATATTGACTTTGCCGCCTGTAGGCAAGCTTTTTTCTACTTGCGTGCAATACGTATCGATCTGACTCTGACTGCTGCAGAAACGCATGTAGACAGAAAATTGCGACATTTCAAAACCCATATCCAACAGAGTATTGCGAAAATCTGTCGCGGCTTTGCGCTCAGCTTTTTCAACGACAGGTAAATCAAACATGACAATAACCCACATTAAGCGATATCCTGAAAGCATAGCACGTTAGTCCTCCATAAATGATGCAGCAAGGTCGAGCGGCAGCCCTGGCAAAGGCAAGTCCATTTTATTTCTTTCCCCCATAAAAACTTGCGCCAGCGAGG

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AGTTCCGGTCAGAGCACAAATCCCAATATGCTAAACT
# Alternate repeat :   AGTTCTGGTCAGAGCACAAATCCCAATATGCTAAACT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:56.76%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.70,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//