Array 1 49984-51862 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHDAB010000002.1 Streptococcus lutetiensis strain P463801 KS_30_NODE_2_length_168498_cov_587.1_ID_397, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 49984 36 100.0 30 .................................... AACCGCGCGGAGCGCACGGAGCGTCAGCGA 50050 36 100.0 29 .................................... TGAGTATGCAAGCCTCGTCGCCGGAATGG 50115 36 100.0 30 .................................... TTTCATAGTTACACCTCTTCAACTGCTGAA 50181 36 100.0 30 .................................... CGAATCCTTGCTTGGGTATTAAGGCTAGGA 50247 36 100.0 30 .................................... CGTTTTATATGAGAGCGCCCCAGAATGTGT 50313 36 100.0 30 .................................... AAATCATACACAGTATCATCTGCATATTTT 50379 36 100.0 30 .................................... AGTCTTACATTGTTGACGCCGGCGCTGTTT 50445 36 100.0 30 .................................... GAGTCATTAATTTCGATGGTGTCACCGACT 50511 36 100.0 30 .................................... TTGACGAATGGAAAACATTCGCTAATGAGC 50577 36 100.0 30 .................................... GCGTACTTGTCACGATTATCGCTATCATAG 50643 36 100.0 30 .................................... AATACGAACAATAGTCGCTACGGTTCGATT 50709 36 100.0 30 .................................... TGGAAATCAAAGACCAATTTGTTAACGACT 50775 36 100.0 30 .................................... TAAAACGTGACTTCTACACGAACAGCACCA 50841 36 100.0 30 .................................... ACAAAAGGCCCAATCGATGATGAGGTCTGG 50907 36 100.0 28 .................................... TACTATACCAGTAATTGGTGCGCAAGTG 50971 36 100.0 30 .................................... CGGTAACACATTTATTCGAACAACTAGCGC 51037 36 100.0 29 .................................... CTATAATAGGCATGAAAGCAAGCAACAAT 51102 36 100.0 30 .................................... CAAGTACTATTAGTATCAAATCGCTGCACT 51168 36 100.0 30 .................................... TGTCTCTCGGAACTTGTGGTTTGTTTTCTG 51234 36 100.0 30 .................................... TGAAGAAAGTGAAGAATATCATTTCACGCA 51300 36 100.0 30 .................................... CCGACGAAGAAGCCGAAGATGGTGACGACT 51366 36 100.0 30 .................................... TGTAGGCGCATGTAAAAGATTATCTCCGTT 51432 36 100.0 30 .................................... CAATTTTACAATTCTAGAAATTGAACAATA 51498 36 100.0 30 .................................... AATTGCTTCTGATTGCGCAGCCGTCTGACA 51564 36 100.0 30 .................................... GCAACACAAGCGAAAAAGCCACAGCGCCAG 51630 36 100.0 30 .................................... AAAGGTGGTGATGTCAAGAATTTCTCTAAG 51696 36 100.0 30 .................................... GTTGAACGTTTAGACGCTCGCGGGCAGCAC 51762 36 100.0 31 .................................... GCAGATTCTTTGGCTTTTGCCCTTATTTTGT 51829 34 83.3 0 ......................--C...ACC..... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.4 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : ATGGATGATTACCTTGATTATGCCTCATTTATAAGAATTTGTCAGGTTATCACAAGAATGGCTGATGAGTTTCCAAATTTTTATTGTACGATTTTTCCGTCAAACGAGAGCTACTTGTATGTGACTAAAGAAACAATAGAAAATATTACCATTGTTTCAGATTATATTGAATCTTTGTTTGATCTTGATTTTATGTATGAAAGGTTTGTTGGAAGATATCCATCCAACAATGTACCAACAAAAAAAGAATTTTTAATTCTTTTACAGAAGAATGCAAGTTATTTATTTAGTGAGCAAATTTCATATGTGAGTTTAGGAATTTCGGATATGGTAGCTATCAAGATACTAAATAGTTTATATCACTATGATAAGTCAGTTAAATATCCAATTTCAGAGATAAATCAGCTTGAAATAAGCTTTCTTAAGGATAAAGATTGACTTTTAGGCTCAATGAAATTATAATTCTTGTAGAGTATAAAGACCCAAAATGACGATTTGAG # Right flank : CCCCACCTAGTTCGTCACTGGGTGGGGTAATCTATGTGGGTCATAGGTTTGCAGAATTGAGTTTTTATTACCTTTGATTAATGATAACGCTTTCTGCAAAAATTGTAAAATGATTTGCGGTAGCTGATTTTAGCGATATTTATCGTGCCTAGAAAACTTTTTATAGCACCAGTGGTGTTTATTTGTTATAATAGAAATAATGAATAATTGTATAGGATTATAGATAGATGGATATTCAAGAATTAAAAAAACGACAAGAAAAGATTCGCAATTTCTCAATTATTGCGCATATTGACCACGGAAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACTGAAACTGTCTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGTATGGATTTGGAACGTGAACGTGGTATCACAATCAAATTGAATGCGATTGAGTTGAATTACACAGCTAAAGATGGTGAAACTTACATTTTCCACTTGATTGACACACCAGGGCACGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //