Array 1 1104858-1101154 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUB01000001.1 Prevotella sp. R5076 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1104857 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAT 1104791 36 100.0 29 .................................... ATATAGTGAAAATATAGAAACAAATAGTG 1104726 36 100.0 29 .................................... GAGTATATGCAACTAACTCAACATTAAGA 1104661 36 100.0 29 .................................... TGGACGAGGTCGTCACGTACTCCAGTTGC 1104596 36 100.0 30 .................................... CTGTAGTCATCGAGACATAAGAACCTTCAG 1104530 36 100.0 29 .................................... AAGATTTGTTAACAAATCCAGTCCGTAGT 1104465 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 1104400 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 1104335 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 1104269 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 1104204 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 1104138 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 1104072 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 1104006 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 1103940 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 1103875 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 1103809 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 1103744 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 1103678 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 1103613 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 1103547 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 1103482 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 1103417 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 1103352 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 1103286 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 1103220 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 1103154 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 1103089 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 1103024 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 1102959 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 1102894 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 1102828 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 1102762 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 1102696 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 1102631 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 1102565 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 1102500 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 1102434 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 1102368 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 1102302 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 1102237 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 1102171 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 1102106 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 1102040 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 1101975 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 1101910 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 1101845 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 1101779 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 1101714 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 1101648 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 1101582 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 1101517 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 1101451 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 1101386 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 1101320 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 1101254 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 1101189 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : TCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTATTTTTGCCAATATTATTGGTAATTTCTTGCAGATATGGCCATTTATTTGTACCTTTGTATAGTTCTTTTAATTATATAGATACTATACATATTTATGGCTATTCCAGAAGAGATAAAGTCAGTCGCCCGCCCCAAAAGTACGATAGTCCGACAGAGAGGCAGTCGTTTTGTCGTCATAAAAAGGACGAGCAAAAGAATTAACGGGAAGCCTATCCCCGTAGACCAAGGAACGGTAGGAGAAATTGTAAACGGCAAGTTTGTCGAGGGCTCATATATGCGCAAGAAAAATCAAGTGGATATTAAAGATTATGGAGAGGTGGCTCTCTGTGACAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 1135545-1139334 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUB01000001.1 Prevotella sp. R5076 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1135545 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 1135611 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 1135676 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 1135740 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 1135807 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 1135873 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 1135939 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 1136005 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 1136069 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 1136135 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 1136201 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 1136267 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 1136334 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 1136400 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 1136466 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 1136532 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 1136598 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 1136665 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 1136731 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 1136796 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 1136862 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 1136929 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 1136996 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 1137062 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 1137127 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 1137194 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 1137260 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 1137327 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 1137393 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 1137459 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 1137525 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 1137590 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 1137656 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 1137722 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 1137788 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 1137855 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 1137921 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 1137987 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 1138053 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 1138119 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 1138185 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 1138251 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 1138317 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 1138381 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 1138446 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 1138511 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 1138576 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 1138643 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 1138709 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 1138774 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 1138839 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 1138904 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 1138970 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 1139038 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 1139102 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 1139170 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 1139236 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 1139303 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : CAGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1141471-1143277 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPUB01000001.1 Prevotella sp. R5076 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1141471 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 1141536 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 1141602 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 1141669 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 1141736 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 1141802 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 1141867 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 1141932 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 1141997 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 1142062 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 1142129 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 1142194 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 1142259 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 1142326 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 1142392 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 1142459 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 1142526 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 1142591 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 1142656 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 1142720 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 1142785 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 1142853 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 1142919 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 1142985 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 1143050 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 1143114 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 1143179 32 100.0 35 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTGA 1143246 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CCACCTACACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //