Array 1 104169-104797 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076457.1 Streptomyces sp. YPW6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 104169 25 100.0 36 ......................... CAGCCAGCCGAGGTTGGTCAGCGGGTGCACCAGTAC 104230 25 100.0 36 ......................... TACCCCGTACCGCCGCCGCTCAACTTGGGCAGGTAC 104291 25 100.0 36 ......................... CCGTCGCAGATGGGGATCCGGGTGATGCGGGAGTGC 104352 25 96.0 31 ........................C ACACCACCACCGTCGGCCCGGAATGTCCGAA 104408 25 88.0 36 .........G.......C...C... GCGTCCTCGTGGGTTGAGGGTTCGTGGAGATCGTAG 104469 25 92.0 36 .........G...........C... TTCGTCAGCACCATGGGCGAGTCGGTCCACAAGTGC 104530 25 88.0 36 .................A...C..C CAGCCAACCCGGCCCGGCAAAAGGGACATTGGGTAG 104591 25 88.0 36 .........G.......C...C... GGGGTCCTGCGTCTGTCCGACGGCCAGGACCAGTTG 104652 25 84.0 35 .........G.......CC..C... AGTGGCACCTCCTGTGGAACTCCACCGAGCCTTAG 104712 25 80.0 36 ..T..........A..A..A.C... ATCATGTTGCGACAAACGTTCTTCGCTCATTGGTAG 104773 25 76.0 0 .....A...G.A....A...T...T | ========== ====== ====== ====== ========================= ==================================== ================== 11 25 90.2 36 AGCCCGCGCAAGCGGGGGTGATTCG # Left flank : AGGATGAGGACCGCCGGTCCGGTTGGCTGGCTCGTCCACGCGGGCCTCGGCGCACCCCCTCGACCGACGCCGGCCGGAAGCAGGCCAGCCCGCGGAGTCGACAGCAGCGTCACGCGGGCGTCTTCGCCCTTCCCCGGTAAGAGGAGTTGCGATGTCTGGGCGGCGGACAGAGCCTCCAACTCCGTGGGATATTCGGCCGCAACGACGGTTACATAAGGGCGGTCCTCCTCGGGCGGGGCCAGCAACATTTCGTCAGCCTCGCCTGGTCAAGGCCAGCGAAAATCTGATCCCTCCGGTCATCCCGGAAGCCGAGCCCGCCTCTCCGGCGGCTGCAGCATCCACGAGTACAGGTTCATGACATGAGCGATGCGAGATCAGCCTGCCGTCGATATGCTCAAGCTCATCGCGTACGCCACCAGGAGTACCTGTTGGCCAACCTTGAGGCAGCACAAGCAAAGAAACAGTAAAGCAGCTCAGAACATCCAGGTCAGGAAGGGTAC # Right flank : TCGCTCCCATGAGAGTAGTGACAGCCGCTGAGGGCTGGCTCCAGCAGGAACGAACCGGCTCTCGATGGCCTTGACCTGCCGCTTACTGAGCGGGTCCCGTGTGAGGTGGCAACCCGTTCGCCGATCGGCAAGCTCGCCCGGGCGCACGCGACACCGAGTACGGAGAAGTAAACTCAGCACAAAACCGCAGGTCAAGAGCATCGTCTTATTGCAACTCTCAGCGGAGCGAACAGGCAATTCTCATGCACCTGCATCAGCAGTTCTCATGACATTCCTTAAGCAACCTCATATCGCCCCTGCTCCAGTAGCTAAGATGCGCCACCCCAGATCACACTGAAATGAGAATCATCTACGGCAGGGAAGTGACAGTCAGCAGGGGGCTGTTGCTGGACTGGGAGCGGGCCTGGGCCCCGCGACTGCTGACCGAGGTCAAGCTGGCGTGCTACCGGGCGCAGCTGGACGGCGCAGCGGCCCAGCTGCTGTCGGAGATGGCCGACGAC # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCCGCGCAAGCGGGGGTGATTCG # Alternate repeat : AGCCCGCGCGAGCGGGGCTGACTCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 7675495-7674866 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076457.1 Streptomyces sp. YPW6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ==================================== ================== 7675494 25 100.0 36 ......................... CAGCCAGCCGAGGTTGGTCAGCGGGTGCACCAGTAC 7675433 25 100.0 36 ......................... TACCCCGTACCGCCGCCGCTCAACTTGGGCAGGTAC 7675372 25 100.0 36 ......................... CCGTCGCAGATGGGGATCCGGGTGATGCGGGAGTGC 7675311 25 96.0 31 ........................C ACACCACCACCGTCGGCCCGGAATGTCCGAA 7675255 25 88.0 36 .........G.......C...C... GCGTCCTCGTGGGTTGAGGGTTCGTGGAGATCGTAG 7675194 25 92.0 36 .........G...........C... TTCGTCAGCACCATGGGCGAGTCGGTCCACAAGTGC 7675133 25 88.0 36 .................A...C..C CAGCCAACCCGGCCCGGCAAAAGGGACATTGGGTAG 7675072 25 88.0 36 .........G.......C...C... GGGGTCCTGCGTCTGTCCGACGGCCAGGACCAGTTG 7675011 25 84.0 35 .........G.......CC..C... AGTGGCACCTCCTGTGGAACTCCACCGAGCCTTAG 7674951 25 80.0 36 ..T..........A..A..A.C... ATCATGTTGCGACAAACGTTCTTCGCTCATTGGTAG 7674890 25 76.0 0 .....A...G.A....A...T...T | ========== ====== ====== ====== ========================= ==================================== ================== 11 25 90.2 36 AGCCCGCGCAAGCGGGGGTGATTCG # Left flank : CAGGATGAGGACCGCCGGTCGGTTGGCTGGCTCGTCCACGCGGGCCTCGGCGCACCCCCTCGACCGACGCCGGCCGGAAGCAGGCCAGCCCGCGGAGTCGACAGCAGCGTCACGCGGGCGTCTTCGCCCTTCCCCGGTAAGAGGAGTTGCGATGTCTGGGCGGCGGACAGAGCCTCCAACTCCGTGGGATATTCGGCCGCAACGACGGTTACATAAGGGCGGTCCTCCTCGGGCGGGGCCAGCAACATTTCGTCAGCCTCGCCTGGTCAAGGCCAGCGAAAATCTGATCCCTCCGGTCATCCCGGAAGCCGAGCCCGCCTCTCCGGCGGCTGCAGCATCCACGAGTACAGGTTCATGACATGAGCGATGCGAGATCAGCCTGCCGTCGATATGCTCAAGCTCATCGCGTACGCCACCAGGAGTACCTGTTGGCCAACCTTGAGGCAGCACAAGCAAAGAAACAGTAAAGCAGCTCAGAACATCCAGGTCAGGAAGGGTAC # Right flank : CGCTCCCATGAGAGTAGTGACAGCCGCTGAGGGCTGGCTCCAGCAGGAACGAACCGGCTCTCGATGGCCTTGACCTGCCGCTTACTGAGCGGGTCCCGTGTGGTGGCAACCCGTTCGCCGATCGGCAAGCTCGCCCGGGCGCACGCGACACCGAGTACGGAGAAGTAAACTCAGCACAAAACCGCAGGTCAAGAGCATCGTCTTATTGCAACTCTCAGCGGAGCGAACAGGCAATTCTCATGCACCTGCATCAGCAGTTCTCATGACATTCCTTAAGCAACCTCATATCGCCCCTGCTCCAGTAGCTAAGATGCGCCACCCCAGATCACACTGAAATGAGAATCATCTACGGCAGGGAAGTGACAGTCAGCAGGGGGCTGTTGCTGGACTGGGAGCGGGCCTGGGCCCCGCGACTGCTGACCGAGGTCAAGCTGGCGTGCTACCGGGCGCAGCTGGACGGCGCAGCGGCCCAGCTGCTGTCGGAGATGGCCGACGACGCC # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCCGCGCAAGCGGGGGTGATTCG # Alternate repeat : AGCCCGCGCGAGCGGGGCTGACTCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //