Array 1 20-781 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEDM01000023.1 Anoxybacillus flavithermus strain KU2-6_11 NODE_21_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 .................................... TTCGGAAATAGTTGTTCTGCTAGACAGAAA 86 36 100.0 30 .................................... CACTAATGTTCTTTCTATCATAGTAGCAAA 152 36 100.0 30 .................................... TTCAGAAATAGTTGTTCTGCTAGACAGAAA 218 36 100.0 30 .................................... GCCGTTCTCGCTATACATTTTTGCTGATGA 284 36 100.0 30 .................................... GTTGTTTCTCTACAGTTTTCTTTTTCTTCA 350 36 100.0 30 .................................... TCTAAAATTAATTTCTAGTTGGACTGGTCT 416 36 100.0 30 .................................... TCCGCTCCGTTTCGGTGCAAAAGTGTAGCA 482 36 100.0 30 .................................... AAAAACTTCCATTTACCGAATTGACCCACG 548 36 100.0 30 .................................... AGCTACTGCTTTTTTCATGATCTCCTTTTT 614 36 100.0 30 .................................... GAGGATTTATAGTGAGTCTAAAACTTTCGG 680 36 100.0 30 .................................... TTTCTTTTTATCAAATAAGTGTGTCATTTT 746 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 ATCATAACACAGCAATAACCTCAGGGGAACTATGAC # Left flank : TTGTTCTGCTAGACAGAAAA # Right flank : CCTCAGGTGTCTTATTCAAGGATAGATTGATAATTTACATTTGGCCATAAAAAACCCCTTACAGGTAGACTCTTAAGAACACCATAACAAATGTCCACTTTTTTGTACCTGTAGGGGATAATACTAATCCGTACTTTGGATCAGCCTTTTTTCATCTCAACAGCTTCCGCACCCATTTCAGCGCATTTGGAAAGTTTGGATAACGCAAAGGAATATCGAATTTCGTTGTTTGTTTTAATACACTCTTGTAGTGAGTGAACGCATCAAAGCTTGCTTTTCCATGGTATGCACCAATTCCGCTTTGTCCAACGCCACCAAATGGTAGATGTGGACTGGCGATGTGCATGATCGTGTCGTTAATACATCCTCCACCGAAACGAACTTGTTGTAATACTTGTTGTTGCACATCGCGATCTTCTGAAAACAAATAAAGCGCAAGCGGCTTTTCGTAATCGTTGATCATTTGAATCGCTTCATCTATTGTTTCAAATGTAACAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATAACACAGCAATAACCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [20.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 23637-17444 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEDM01000031.1 Anoxybacillus flavithermus strain KU2-6_11 NODE_29_length_32136_cov_4.70942, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 23636 29 100.0 38 ............................. GTGTCAAGGCTACGGCCGTGACTTTGTCGCGACACATA 23569 29 100.0 37 ............................. ACACGATCGTAATGACTTCAAACAATTTTGGCTTTGC 23503 29 100.0 36 ............................. TTTGTCATCACTTCCTTTACCTTTTGTCACTATATT 23438 29 100.0 39 ............................. TTGTCATGTACTTCGTCACATACGCCCCAACGTTGTCAC 23370 29 100.0 38 ............................. AATCGAAGACGTTCACGTGGACGACTTCCAGCGGTTTT 23303 29 100.0 36 ............................. ACACCGATCTCAACGCCAGCCGCACCAGCTACAACC 23238 29 100.0 36 ............................. CGCATAACTAACTTGAACTTGAGAAGAAGAAGAAAG 23173 29 100.0 36 ............................. TGTCATATTCCTTGTTTAAATGGTTTAACAGACTAA 23108 29 100.0 39 ............................. AAAAAGCCTGTCCTCAAACTTGACGCCACAGGGCGTATA 23040 29 100.0 38 ............................. AGATGAGAGAAGAATTATTTATTTTAAGATTTATATAT 22973 29 100.0 39 ............................. GGGAAATCGGTAAGCTCACTGCTTGTCATAATCGTGAGT 22905 29 100.0 37 ............................. AAATGTAAAGGAGTACAGAAAGGCGCTTTGCTCCCTC 22839 29 100.0 37 ............................. TCTCATCTCTAGGGAGCTATTTGAGGCAGCGAATAAA 22773 29 100.0 41 ............................. GGATCAGGATACGGCTGATCAATCGGAACAACAATCTCAAT 22703 29 100.0 35 ............................. TTTGATTGGTATTATGTGGTGACATCGGTGTCTAG 22639 29 100.0 37 ............................. AGATGAGAGAAGAATTATTTATTTTAAGATTTATATA 22573 29 100.0 35 ............................. TGTTTAGCGGTTGTTATAACGCGGATAATAAATTT 22509 29 100.0 38 ............................. AGCCTTTCACGCGTCTGTTTCCAATAAGTCACATACAT 22442 29 100.0 37 ............................. GCGTGCGAGAACGCGGACAACGTAGTAAACAGAAAGA 22376 29 100.0 35 ............................. CTAAACATTGCGACTCTCGCCCAAAAAACTGATGA 22312 29 100.0 37 ............................. AAAGAACAAGAAGGAACACCGGAAACGGGTAATGCAC 22246 29 100.0 36 ............................. AGCAGAAACCCGCTAGGCTAAATTTGTAATTACTTT 22181 29 100.0 36 ............................. TGATTTGCCTGTCTATCATTCTGTCAGATTGACACA 22116 29 100.0 37 ............................. GATTCTCGCTTGAACGTTGTTTTTTATGAGAAAAACA 22050 29 100.0 37 ............................. GAGGTTCAAGACTCTGTGACTTCTTCAATGAGTGAAA 21984 29 100.0 38 ............................. AAAGGTAGCATACGACCTTGTGAATCTGTTACTTGAAT 21917 29 100.0 37 ............................. TTGGATTGACGATCAAGTTTCACGAACAATAGCGAGG 21851 29 100.0 39 ............................. AATACAAAACCTAGTGACAATGCTAATAGGTGGAAGAAG 21783 29 100.0 40 ............................. ACAATAAGGTCATAGAGTTCTTGAAGAACATCAAGCACTA 21714 29 100.0 35 ............................. GTATTGACAGCAACAGAAGAGTAGAGAATCACAAA 21650 29 100.0 36 ............................. TCAACCTTCACCAGCTTTATTTCGCGAGGCGGTTCA 21585 29 100.0 38 ............................. CATTCATAGCGTCATGGTATCGCCGCTTGTACTTCGCC 21518 29 100.0 38 ............................. TGAGCAAGCTGGCGTTGCTGTTGATGTTGTGCGTGATC 21451 29 100.0 38 ............................. GATTATGGTCGTCAGATAGGTACGAGAAGTTCTGTTAC 21384 29 100.0 37 ............................. TGCTAAATCTGTCGAAATTTGCAAAAGAAATAAAAAA 21318 29 100.0 39 ............................. AGGGAAAAAACGCGCCAACTATGCTGTGTTGCGTGAAAC 21250 29 100.0 38 ............................. AGTCTTTCCTAACAATGGCTTCACTGATTATTTTAAAT 21183 29 100.0 37 ............................. TCAAGATCGTTTAAAATTTATGTTTTAAATAGACTTG 21117 29 100.0 39 ............................. CCATTGTACTACACGCATACCCGACAGGTCTAGTGCCTG 21049 29 100.0 39 ............................. AAAGATAAGATGCAAGTTGTTGAAGGACTAATTCGTCGT 20981 29 100.0 37 ............................. ATTAATAGTGCAAAAAACACTATTAAAGGTATATTGG 20915 29 100.0 38 ............................. GTGAATGCGATTCGAGATGCTGTTCCTTCGGCATTTGA 20848 29 100.0 37 ............................. AAGGCATTTGCGACAAGTCTGAAATTGTCGTGATATT 20782 29 100.0 39 ............................. TAGATCGTCAATAGAGGAGTTTTTTAGATTTTGCCTTTC 20714 29 100.0 38 ............................. CAACTTTTTACTCTAACTTTTTACTTTGCTTGAAGTTC 20647 29 100.0 39 ............................. TAAGACTCTCACTTATGGCAAGAACATTTGTCTTAAAAA 20579 29 100.0 34 ............................. AAGTTTTTGAACCCAAATCAGAATTTACAATAGA 20516 29 100.0 36 ............................. GTCTCTGTTCCTGTCTCTGTTCCTGTCTCTGTTTGA 20451 29 100.0 35 ............................. GATGCGACGATAGAACGTGCAAAATCTTGGGTTGA 20387 29 100.0 38 ............................. ATAACGAAATGGTGTTTATCAAACACAAGTATCGAAAT 20320 29 100.0 34 ............................. AGTACTGCGAGTACTGTATTGCTTTTGTTCATGA 20257 29 100.0 36 ............................. GAAAAACAAAAACCGAAGTAAAAATATATACCGTCA 20192 29 100.0 35 ............................. CAAACCAAGTAACTTTATTTAAAAACACTTTAAAG 20128 29 100.0 38 ............................. GTATAATTTAGCGGTTAAAGTGGTACTACCAGTACCGT 20061 29 100.0 38 ............................. AGCGGATAGAATGATAGACCGTCAGATTCGCGGATTAG 19994 29 100.0 36 ............................. TGGGTTGCGTCACGCTACGATACAATGAAAATTTTC 19929 29 100.0 38 ............................. GACTAAAATTGAGCGTGAGCTAATTATTAAACGATATA 19862 29 100.0 38 ............................. ATTCTCCTTGCCATATCGCTATTTGCTGAGCAACAGGA 19795 29 100.0 35 ............................. TGATATATGTCTTATATATGTCTTTTTGATACTAA 19731 29 100.0 37 ............................. GTGTCATCTGACGAACGAAGCATCATTGTGGAATATG 19665 29 100.0 39 ............................. TTGAAACGCTCTTGAACGAAACTGTCAAATATGAAGCGA 19597 29 100.0 37 ............................. ATGTTTGAAACAAACGGAACGAACTGGACGGACTTGA 19531 29 100.0 35 ............................. AAGGAAGAACCAAAGCAGCCGACTCCGTTTGAACA 19467 29 100.0 36 ............................. TCACAGACAACAGACGTTGGCGGTGGTATCGGTTGG 19402 29 100.0 39 ............................. GTATGATACAGGCTATATCTTCAGGTATGGCGAGCTTTG 19334 29 100.0 38 ............................. TTACGTTTCTAGTTACAACTGACTTTCATCATCTAGGC 19267 29 100.0 35 ............................. CCATCCTCATTACCTTTATACGGTTCTATCGCCGC 19203 29 100.0 38 ............................. TTCTGCAGCATCCTGAACACTCGTTTATGTTAGCAAAC 19136 29 100.0 36 ............................. GGCATTCATACACAGGAACAAGACCAACTCACTTCA 19071 29 100.0 37 ............................. CCACGTCCAAGCATCCATAAATGTTTACGATAAAAAA 19005 29 100.0 39 ............................. TCGAACGATGTGTTAAGCAAGACAAGACAGATCGCATTC 18937 29 100.0 36 ............................. AGAAGAAGGTTGGAAGAGGGAGAGAAGAAAGCACCT 18872 29 100.0 36 ............................. ACATCAGTTTTTAATTCTTTTTTAGCTAATTCGAAC 18807 29 100.0 38 ............................. ACGTTGAAAGGGAAATTTGTAAAACGAGAATTCGATGA 18740 29 100.0 39 ............................. GTGACATATATCGCATTGTCGCGAATTTCATCGATACGT 18672 29 100.0 38 ............................. TTGCAGCGATTAAATTGCTATCGTCCATTCGGGTGGGA 18605 29 100.0 39 ............................. ATGTTACAGAATTAGAATTATTTCCTTCTACTTATTCGA 18537 29 100.0 35 ............................. GTGTATCCTGTTCTGGCATATTTTCATCCCCTTTC 18473 29 100.0 39 ............................. CCTCCCTGCGTGCTTATTAATCGCTATAATCAAGTTAAG 18405 29 100.0 40 ............................. TCGTGGTGAAATTCGTATGAAGTTTCGTTCTTGGCGTCCG 18336 29 100.0 38 ............................. CTTGGGAATTGATGAAGAATGTTGGAAACCAGGTCGAA 18269 29 100.0 38 ............................. GCTTCTTCTTCTTTATTCGCTTTTTGCTTCTTGTTTTG 18202 29 100.0 39 ............................. TTTTATATCCTTCACGTTATCCCTAAATGTCAACGTGAA 18134 29 100.0 42 ............................. CTTCAATCGCGCTCGGAAAAATCTCACGTGCTTGTTGTTCTT 18063 29 100.0 37 ............................. AAAGTGGAGATAATTCTATTATATCTATCGCTCGACA 17997 29 100.0 39 ............................. TGTACCTGTTCAAAAATACCAGGCTTCCCATTTGCCAAA 17929 29 100.0 39 ............................. TTAGGAAATAGTAAGTTTGACGAATACATTTGTAATATT 17861 29 100.0 37 ............................. AATGGTGAGTCTTTGAACAGTCCTGACGGTTTGTTCA 17795 29 100.0 35 ............................. TTTTTTGCCGACTTCAATATCAGATTTAAGTCCAC 17731 29 100.0 37 ............................. TCGCAAATTTACCCGATTCCTTGTGTTTCTGTAGAGG 17665 29 100.0 34 ............................. GAAAGATACATATCGTATATCTTTCTGACGATAA 17602 29 100.0 37 ............................. GTAATTCTTTTTTATTTTCCATTTCAAATTTAACATC 17536 29 100.0 35 ............................. GTAAGGCGCTAGCGTTCTCAACGCTCCAGCAAGCT 17472 29 72.4 0 .........A.........AA..A.CCCC | ========== ====== ====== ====== ============================= ========================================== ================== 94 29 99.7 37 GTTTTATCTGAACGTAGTGGGATGTAAAG # Left flank : ACATTTCATTGGCGATGAGCCTTATAAACCATTGAAAGCATGGTGGTAGTTATGTTTGTAATCATTACGTACGATGTTGGAGAAAAGCGTGTAAATAAAGTGTGTAAAAAGTTAAGAGAGTACTTAACATGGACACAGAACTCTGTGTTCGAGGGGGAAATTACTAAAAGTTTGTTAATGAAATGCTTAAACGAAATCGATCAAATTATCGATGAAGATGAGGATTCCATTTATATTTACGAAGTGGCTAATCCGAAGAACATCAAGAAGCAAGTATTTGGACAGGAGAAAAACTTTGATGAACTTTTTCTTTAACATTTGCAGTGAACCTCTAATTTGAAAAAACGGAAAAGATGCTTGATATATCAACAAGAAATGCGGTAGTTTTAGGATAAGAAAAAACACGACTGACGCTTCACTGCAAAAAGTAGAAACTTGTCATATCAACCATTCTCCAAAATCGTTGATATGACAGCACTTTGTGCTTTTAGATTTGAGGG # Right flank : CTTTCACTTCATTTTCACCATTCACTCGTACACTTACGGTATACAGTACATGATATGGTGAATCAGGGGGGATATGTGTTGAAGAAAAATATTGTAAAAATCATATTAGATGTATCGTTGGCGATTATGTTTGTGTTATTAATGAATCCGAGAGTGTTTAACGGATTGCCGTTTCATGAAGTGGCAGGTCTAGTGATTGGTGTGGCTGTTTTGATCCATATTGGTTTAAACTACAAATGGGTTGTCAATACGGTGAAAAACATATTCAATCGTTCGCTTTCGGGGAAGGCGAGATTTGGTTTTTTATTAAATGTGTTGTTGCTCGTTTCGATGGCAGCTATTATCGTGACCGGTATTCTTATTTCGAAAGTTGTATTTCCGCATTTTTCAGGTGGGGAAAATCATGCGCTAAGGGAGCTTCATGATATTTTTTCGAAAGTGACGCTTGTGCTTGTCGGTGTCCATATTGCATTACATTGGCAATGGATCATGGGTGTGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //