Array 1 1380162-1376135 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017881.1 Methanohalophilus portucalensis strain FDF-1T chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 1380161 37 100.0 38 ..................................... AAGAGGATCCTGATTTACTGGAAGAAGAAGTGGCTCCA 1380086 37 100.0 36 ..................................... GTTTGACATATACACTCAGGAATTTCGGATACAGGC 1380013 37 100.0 37 ..................................... TCCATTACATAATCTGCAAGGGTTTTTGGTTTCAATC 1379939 37 100.0 36 ..................................... AACATGGAATTATACTATTAAAACATGGAATTAAGC 1379866 37 100.0 36 ..................................... CCAGAGCACCGAGATAACTGACGGTACTGGAATGAT 1379793 37 100.0 36 ..................................... TGATCCAGTGGTATGCATCAATCGGATTGAATGACA 1379720 37 100.0 38 ..................................... TGTCTGCAACATATATATACCTTGTTCCTATTACCAAT 1379645 37 100.0 38 ..................................... TCAGGGGCTTTGAAGTTGAAAATAGATTTTGCATCTAT 1379570 37 100.0 37 ..................................... CTGTCCGTAGCGGCCGGTGCGGCGGCTGTAGGATATG 1379496 37 100.0 36 ..................................... TGTTCCTCTGGGCTGGTGGCTTCTGTCATAACCTTT 1379423 37 100.0 36 ..................................... TTTCATCAGATGCTGTGTAGAACTTCCACGATTCAT 1379350 37 100.0 35 ..................................... CAACATCGTTGGATCGCATGAAAACAGTTAAATCC 1379278 37 100.0 36 ..................................... CATCTATACAGATTACAAACAGCCTTACAGGATTTC 1379205 37 100.0 35 ..................................... TAGAATTCCTTTGCTTCATTGACAAACTGGCGAAA 1379133 37 100.0 38 ..................................... CTATTTATTTTGTTATGGCTGTCACGCAATGCGGCAAA 1379058 37 100.0 35 ..................................... TCCTCTTTGTACTTGTAGTTCAAGGATTCTTTCTT 1378986 37 100.0 46 ..................................... TGCATAGTCGAAGCAATATGGATATACTTGCTCAACAAGCAACTCA 1378903 37 100.0 38 ..................................... CAATCTTTTGTTTCCTTCGCCGAGGGAGCAAGGGACGC 1378828 37 100.0 35 ..................................... ACGATTTTGTAGCCGTATATGACGGATGCGGGTTC 1378756 37 100.0 38 ..................................... GATACACAGAAGAAGGCCTCCGATGTTGCCACAGCTGT 1378681 37 100.0 37 ..................................... CTATCTTATAATACTTGGTTTGCCGTTCTTTATGTTG 1378607 37 100.0 38 ..................................... TTATAGTGTCGGTGCTATAAGCTTAAAGTTATAAAATT 1378532 37 100.0 37 ..................................... TAGTTTGCGTTGCCATGGAAGGGTTGTAACTCATCTA 1378458 37 100.0 37 ..................................... TCTTCAATAGTTAAATAATATGGTTCACCATCAACAT 1378384 37 100.0 37 ..................................... CATATGCATCTACACCCTTTTGTTGAGGGTATAACGG 1378310 37 100.0 32 ..................................... CTCTCTCCAATTGTTTTGAACGTCTTGCTTCA 1378241 37 100.0 36 ..................................... CCGCATACTATACACATTTCACTCATGGTTCTCTAT 1378168 37 100.0 36 ..................................... CAAGGTTCTCCAGTTTCTTGCAAAGGGTAATATACC 1378095 37 100.0 37 ..................................... ATAAGGTCCTCCATATCTTCTGATATATCCACATCAT 1378021 37 100.0 35 ..................................... TTAAACGGTGACTGTCCAAGAAAATCCACGTTCAA 1377949 37 100.0 35 ..................................... ATCATGTAATGTCTGGTAGAAAATTAGGACATAAG 1377877 37 100.0 36 ..................................... AATATATCGGCAGTATGTGAGCAGGCAATTCTAAAA 1377804 37 100.0 37 ..................................... CCTGTCGTTTAAGCGGATCGCACATGAGGAGCTCGAA 1377730 37 100.0 40 ..................................... TTCGGGTAGGCAAGAACGAACTGTATTATCTTGCTCTTGA 1377653 37 100.0 35 ..................................... TGTGTTCATGACTGTCGTTGATGCTGACGGTTCTG 1377581 37 100.0 45 ..................................... TCCGAATTCTCCAGGCTAACTCTTGCATGTAATATACAACGACAA 1377499 37 100.0 36 ..................................... CTTATTATGGTATGTCTCCAATACCTGTTGTATCTT 1377426 37 100.0 34 ..................................... TTCAGACTCTCAATACATCAGGTGGTGGCTCAGT 1377355 37 97.3 35 .............G....................... ATCAATATTCAGGCACAATGGAAGAGCGTATTAAT 1377283 37 100.0 37 ..................................... TCTTGCTTTCTACATCTTGTCTGGAATGGGTGTGTTG 1377209 37 100.0 37 ..................................... CAGAATGCCACATCATTTCTGATACGAGGCACAAGTG 1377135 37 100.0 34 ..................................... TTAATTGCTTCAGAACCTTCAGCAATTACATGGA 1377064 37 100.0 35 ..................................... TTTGTGTTCTTCCCATGTGTGCATCTCTCCGTCTC 1376992 37 100.0 36 ..................................... CCGCATACTATACACATTTCACTCATGGTTCTCTAT 1376919 37 100.0 36 ..................................... CAAGGTTCTCCAGTTTCTTGCAAAGGGTAATATACC 1376846 37 100.0 41 ..................................... TTTATCAAGTTACAAATCATATAAGGATGAAGTCCGACAAG 1376768 37 100.0 38 ..................................... ATGAGTATGGGATCGCGATTTTTTGCCACAAACAAAAA 1376693 37 100.0 41 ..................................... TTTATCAAGTTACAAATCATATAAGGATGAAGTCCGACAAG 1376615 37 100.0 32 ..................................... ATGAGTATCAACAGATATTTGTTAATAACAAT 1376546 37 100.0 36 ..................................... TTAATCTGTTCTTGCTTCCCCTCGATCTCCTGACGC 1376473 37 100.0 47 ..................................... GTCTAAGCATGGTCTTAAGCATGGTCTAAGGTTAGTTTAAGCATGGT 1376389 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 1376317 37 100.0 35 ..................................... ATTGGTACAGTAGCAGGATTTCTAGCAAAAAGGAG 1376245 37 100.0 37 ..................................... CATCTATACAGATTACAAACAGCCCTACAGGGTTTCT 1376171 37 97.3 0 ..................................G.. | ========== ====== ====== ====== ===================================== =============================================== ================== 55 37 99.9 37 GTCAAAATTCAATATCCACTAAAACAAGGATTGAAAC # Left flank : ATCTAAAGAAAGAAATGTTTTTGTTGCTTCAAAAGAGAATCACATTAAAGGAATTGTTGATGAAGTACTGTTTCTCGAAGATGGAACAGCTGCGCCTCTTGAATATAAGTTTGCAGAATATAAAGACAAAGTTTATATGACTTATAAATACCAGCTTTATTTGCAGGCATTGATGATCTCCGAGAATTATGATGTAGAAGTCAATAGAGCTTATATTTGTTATACACGAAGTAATAATATGGTCAAGTCTATTAAAATTGAACCGGAGGATGTGGATGAAGCCATAAAGATTGCCAAAAAGACAATTGATATAATAGAAAAGGGAGTATATCCAAAGGCAACAAAGTATAAATCCAAATGTATTGATTGTTGTTATAGAAATATTTGTGTATAATTCTTGTATTTATAAGGGATCTGATAGAAATGGTTCAAGAATTGAGATGCTTGAAAAGGAGGGATATTAGGGCTTCTTTTGGACAAAAAAGGGTGAAAGTTGTGCT # Right flank : TATAATATGAAATAGTAAATTATACAATATAGGAGAATACCATGACCAATGCTAATGAAATTATAAAATATCTTGATATGAGCAAGCACCCTGAAGGTGGGTATTTTAAAGAAACTTACAGATCCGGGGAAACGATCAAGCACAAATACCTACCAAACAGATTTACCCTGGATCATGCATTTTCCACGGCAATTTATTTTTTATTGAAGAAGGGCGAATTCTCAGCACTTCACACAATAAAACAGGAAGAAATCTGGCATTTTTACAGTGGGGCACCCATTGACATACATATGATTCATCCAGATGGCGATTATGAATCGATCCATCTGGGAAACGACATATTGAATGGTGAAGTACCACAGGGTGTTGTCCCTGCAGGTTCAGTCTTTGGCGCAACAGTCTGTGACAGTACCAAATATGACTATTCTCTTGTGGGATGTACGGTTGCACCAGGTTTTGAATTTGAGGACTTTACCCTTCATAAGAAAGATGAATTACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATTCAATATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA //