Array 1 496678-494395 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYNX01000001.1 Photobacterium sp. GB-50 CFSAN065450_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 496677 32 100.0 35 ................................ CGTTAATGTCACTAAATGCTTGCTGGCGATCTGCT 496610 32 100.0 34 ................................ TCCTAGACATTGCAAAAGATAAATTAGCGGATTA 496544 32 100.0 34 ................................ AGTTCACATGTTAACGTGGTCTAAACAACGTGGC 496478 32 100.0 35 ................................ TAACCATGTGGAAGGGGAACCCCACCCTGTATCAA 496411 32 100.0 33 ................................ CACAAACAGTGTGTCACCATGTCTAAATGTGTC 496346 32 100.0 34 ................................ TCGTCGATGAATTCGTTGTACTGATCATACTTAG 496280 32 100.0 34 ................................ AATAAACCTTGCTATCAGTGTAGCTATACCAATT 496214 32 100.0 34 ................................ ATCAACAAAAACACATCAAGTTAATGGCTTGCAT 496148 32 100.0 35 ................................ GGCTGCTATAAAGACTATGATTACTGTGAGCCAGA 496081 32 100.0 35 ................................ AACACCACCGCTAGGTAATTCTACAGGGTCAGATG 496014 32 100.0 34 ................................ ATTACAACACCAAAACCATAGGGGATTCTGAATC 495948 32 100.0 35 ................................ TCAAACACTTGAGAAAGTAACTCCCCTACTTACAA 495881 32 100.0 34 ................................ TTTATGGTTAACACCTTAATAGGATAAAAAAATG 495815 32 100.0 34 ................................ CAGACTGGCGAAGCATTTACAGCAATGGAGCTTT 495749 32 100.0 35 ................................ TCTTTAAAAGTTTTAACGTGGACTTGCTAACTAAC 495682 32 100.0 34 ................................ TTGTTAATACCATTCAATATAGCCTCACCAATCC 495616 32 100.0 34 ................................ TGGTGCTGGTGGATCGGGTATAAACCTACCTGAC 495550 32 100.0 34 ................................ ACTTACTAATAGATCGTAATATCGACATGGATTT 495484 32 100.0 34 ................................ AAGAAGGGGTGTATCGAGATGTTTGAACTTACCG 495418 32 100.0 36 ................................ GGCGGTAGTGCTGCGCGTTTAATGGCAACGTATGAG 495350 32 100.0 34 ................................ TGAAACAGCAGAAGTTAATTTCTCTACGATGTAC 495284 32 100.0 34 ................................ GGAAGATTCAGAAGAATACAAAGATTACAATCAC 495218 32 100.0 35 ................................ TAAAGAGCCATAAGAGCGTTTACACTGTTACTGAG 495151 32 100.0 35 ................................ AAACGTTAGTATTGCATGTTCAACTGCGCTTTTTA 495084 32 100.0 34 ................................ AATAAAAAAGAAGATGGTTCACCGCTTTGCCAAG 495018 32 100.0 34 ................................ AGGTCTAACGCTGTACTGAATGTCGCTGAACCGC 494952 32 100.0 35 ................................ GGAACAGAGCAAAGCCCGACATCTTCATTCGCATC 494885 32 100.0 33 ................................ CATGCTATATAGTTAAACGCCCATTCATTCATA 494820 32 96.9 35 ...........................A.... CAAGATGAACCAGATCCGAATGATGAGTTTGGCGT 494753 32 100.0 33 ................................ CAATCGGCATTAGTAACCATTGAAACACGCTGC 494688 32 100.0 33 ................................ CCAACGTGACGCTGTTTGCATCTGTTGAATCAT 494623 32 100.0 33 ................................ ACAAAACGTAAAACCATGATACTCTTTTTGGGT 494558 32 100.0 34 ................................ TAGTTAAATGTTAGAATTAATACTTACTAAAAAC 494492 32 100.0 34 ................................ ATACCAACAGCAATACCAACAGCCAAAACACCAA 494426 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 35 32 99.9 34 GTCGCTCCCACCACGGGAGCGTGGATTGAAAC # Left flank : TTCTATCAACGTTAAATGAGATATCTAACTATGATGGTATTAGTAACCTATGATGTATGTTTAAGTGATTCATCTGGCAAACGTCGACTACGTCAAATTGCAAAACTTTGTTTAGATTATGGCGTAAGAGTTCAATATTCAGTATTTGAATGCGATATAGCACCAGATCAATGGGTAAAATTTAAAGCTAAGCTACTGGCATTGTATGAGCCAGATGTGGATAGTTTACGTTTTTACCTATTAGGAAAAAATTGGCGTCATCGTGTTGAGCATCATGGTGCTAAAGTTGCTGTTGATATCTACCAAGATAACCTGATTATCTAATTCGCTAACCTTATGTTCTCATGAAAAACCTATTAGGTTAGCTCAAATTTAATTTACTGATTATAAAGTTCTTTTACAAATTAGGATCTACTATTCAAAAAATCATCTCACTTTTAAATATGGTTAGCGCAACCCCCCTTTTTAGCATAGGCTACATCGGCTTTACCCAAAAGGCA # Right flank : TAGTTCGAGCAGTATTGCTTATCTGAAACTGAATATGTTTTTTATAATATATAGATGGTGGAAGTGGTTAAAGTCAGTAGTGGCGGTGTGGTTGAAGAAGCTGTATTCGAAGACGTAAAAGCCACCAGCCAAGCATTAGTTGAACGTTTGGATGAAGCGATAATGATTGTTGATTTCTTTAATAAGCCTGATGATATCGATCATGGGATATACGCACGTAAAGGGCTTATTACGTGGTATAAGCGTCAAGCTGAAAAGAAGATAAGAGAGAAGGTTGAACGTTACGCCCATATCGTAGGTGTTGAAACTGGCGTAATTAGAATTAAGTCGTTTAAAAGCCGCTGGGGAAGCTGTACACCTTATGGTGACTTAGAGTTTAATTGGGTCATTATGATGGCACCGAATCGAGTAGTGGATTATGTGGTTATCCATGAGTTGTGTCATTTAATACAAATGGATCACTCTCCACAGTTCTGGCGTGAAGTTGAACGAGTAATGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCACCACGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //