Array 1 19690-19842 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGNK010000004.1 Streptomyces albidoflavus strain SID9939 contig-3000000, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 19690 24 100.0 41 ........................ TCTTGAACGGACGAGTCTGATCCGGACCTCGGCCCAAAACC 19755 24 100.0 40 ........................ TCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 19819 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : GCGACCTCCTCGACGGTGTACTCCCAGGGCCGCAGGGCATCCAGCGCCGCCGGAGCGGGCGGCGCACCCCTGGGCCCCCGCACCAGCCACTCGTTCCACAACGCACCCCCGGGCGCCACCACCGCCTCGAACCGCAACGCGGGCCAGAGCACCACCGGCCACCGCAACGCCTCACACTCCAGATCCCCCACGACCCGCCGCTCCACGGCCTCCGGCACCCCCAGCACCGACCGCAACAACCCGGCCCCCCGCCGCCCCCTGGGTGACCGCACCATCGCCTGCCACCGCCGGTTCGCCTCCCGCATCGCACCGGCGTCCACCCCCAGCTCCCGCCGCGCCTCCTCCACCATCTCCGCCTGAAAATCAGCCATCCGCCGCAACAACACCAACTGAAACTCAAGCGACCCGAACGAACTGGTCCCACCGGCAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCGCCCCACCGCGAAAAACAGCGGGCACGACCGCCGAAAA # Right flank : ACCCCACCGCACCCCCTGCCGGGGAGGGAAACCTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAGAACCCGGCAAGCGGCTCCCGGGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCACGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCAAGGGACAGCAGACCCAGTACACGCGCCTGCGCGCCGGTGAGCGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 4518-4199 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGNK010000131.1 Streptomyces albidoflavus strain SID9939 contig-6000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =================================================================== ================== 4517 24 79.2 67 ..A.G...A.A....C........ AATCAGCCCGGCCAAAACCCAGCTCAGCCAGAACCCAGCCCCGCCAAAACCCAGCCCGGCCGAAACC A,T [4502,4511] 4424 24 100.0 46 ........................ TCTTTGACCGCCCCGGTCGAACGGCCCGCACAGCCCGGCAAACCCC 4354 24 100.0 40 ........................ TCGTGAGCCGGCACGGAAAGCCGGACAGCACCCCCACCGA 4290 24 95.8 43 ...............C........ CCTCCATGACCGGCACGGTCAAGGGGCGCCCCCGCCAAGCGAA 4223 24 83.3 0 .......C.....A.A.....G.. | T [4201] ========== ====== ====== ====== ======================== =================================================================== ================== 5 24 91.7 49 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : ACGCCGACAAGGACGCAGGCCAGGGGAACGACTCAAGGAACGGTGCCGATGCCCCCGACACAGGGGACAAGGGCAACGGTTCCGGCGCCTCCGGCGGCTCCAGCTCCTCCGGCGGCGGTGGCGGCTCCGCCCCCACCGAAGACTCCGACGGGGACGCCAAACCCCCGTCCGGCGCCCACCGCTACCGCAACGGCGAGAACGCCAAATGCCTGGCCGCCCCGTTCAACAGCCCACCCACCACCGCCGCCTGCAACGGCTCCGGCACGGTCTGGGCCTTCCGCCCCCTCTCGGACGGCTCTTTCGAGATCGTCCACGAGTCGGGCCGCTCCTGCCTCTCCTCCGGCGCCGGAGGCATCCTGCTCCTCTCCTGCAACCAGGCCGAAAGCCGCCGCTGGCGCACCGGCCCAGAAGGCACCCTGAAAAGCGTAGGAACCGGCGGCTGCCTCGACACAGTCAACGGCTCCCGCATCACCACCACCCAGTGCACGGGAAGCCCGTCC # Right flank : CACCCTGCCGACCACCAGCCCGCGAATCCCCTCCCCCACCTCTTCGGGGTACCGCACGACCTTCCCGAACCCCAGCCGCACCTCCTGGTGGCTGCGCCCGGCGTGCTCGAACCGCAGGGTGATCCCGTACTGGTCGAGCCGGGCGGGACGCACCCGCACGGCAGCCGCCCGTACGTCGGCGGGGGCGAGCCGCGCCAGCGCCCGCACCATGTCCTCGTGGGCCGAGTCGAGGTGGGAGAGGAGTTCGGCCTCGGCGCGGGCCAGCGGGTCGGGCTGGGCCACGACCAGTTCGTCGACGCCGATGCGGCGGCTGCGGCCGTGCTCGGCGAGGACGGCGTACTCGGTGTGCAGGTGCAGGCCGCGGTCGGCGGCGGTGCCGAGCCAGCCGTGCAGGCTGAGCCGGGCGCGGACGCGGTCGCGCAGGTGGACGGGGGCCACGTCGGTGAACTCCACGACGGCGGGGAGGGTTCCGCCGAGGGAGGCGTCGAGTTCGGCCCCGA # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 6073-5922 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGNK010000603.1 Streptomyces albidoflavus strain SID9939 contig-6000037, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ======================================== ================== 6072 24 100.0 39 ........................ TCTTTGACCGGCAGGTCACATCGGACCGGCGCACAACCC 6009 24 100.0 40 ........................ TCCGTGACCGCGAGGTCGGCACCGACCAGCACCCCTCGAT 5945 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ======================================== ================== 3 24 100.0 40 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : CCTTCTTCCTCGGGCAGGCCCTGCTCGGGAACCTCTCCGCCTCCATCGGCGACCCCGGCGTGCTGCGGGCCGTCATCGGCGCCGCCCTCTACATGACCCTCATGGCCGTCTTCTCCATGGGCGTCGCCGCGATGCTCCGCTCCCCCATGCTCTCCCTCGGCATCCTCGTCCCCTTCTTCTTCCTCGTCTCCTCCATCCTCGGTGCCGTCTCCGCCACCGAGAAGATCGGCCGCTTCCTCCCCGACCAGGCCGGCTCGAAGATCATGCAGGTGGTGGCGCCGCTGAACGACGACACCCCCTACGGCCCCTGGGGCGGCCTCGGCATCATGGCCCTCTGGGTGATCGCCTCCCTGGCCATCGGGTACGCCCTACTCCGCCACCGCGACGCCTAGCCAGACGGAACCTGGCCATCGACCGGGTGGCCTCAAACGCCGGCCAGGCTTGAGTGGCCTCAATCGCCGGCCAGGCTCAGTGGCCTCAATCGCCGGCCGGGCTACCAA # Right flank : ACCCCCCAGCCCACCCCGGGAGGGAACTTCCGCTTGGCCGGAACCGAACGCCGGTGACTATCCTCCTTACGTTGACGGGGACAACCCCGGCAAGGAACTCTGTCGACGGGTGCGGGGAGCACATGATCGAGGCCACCGGCCTGACGAAGCGCTACGGCGCGAAGACCGCCGTGCACGACCTCTCCTTCCAGGTGAGGCCCGGCACGGTGACGGGCTTCCTGGGCCCGAACGGCTCGGGAAAGTCCACGACGATGCGCATGATCGTCGGCCTGGACGAGCCCACCAGCGGCCATGTCACGATCGGCGGCCTCCCCTACCGCCGCGTCCCGAACGCCCCGCGCCAGGTCGGCGCCCTGCTCGACGCCAAGGCGGTGCACGGCGGCCGCTCGGCCCGCAACCACCTGCTCTGCCTCGCGCAGCTCTCCGGCATCCCGGCCCGCCGGGTGGACGAGGTGCTGGGCGTGGTGGGGCTCCAGGACGTGGCGCGCCACCGCTCGAAG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.20,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //