Array 1 1351-722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRN010000054.1 Anaerostipes hadrus strain DFI.4.155 IKKMFIBH_54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1350 30 93.3 36 C.....G....................... CAAGCTTTCAAGAACTAAATCTAATAAACTTAACTG TAA [1332] 1281 30 100.0 36 .............................. ATTAGTTCGCATCGTTTTGACTGCTCCCGTTGCAAG 1215 30 100.0 34 .............................. CACTTAGGAAACTACAGGACAGCCTGATTCCAAT 1151 30 100.0 35 .............................. AAATAAGAATTTATCGAACAGATCTGTTTTGACAG 1086 30 100.0 38 .............................. TGGCGGAACTGTATAATGTTTAGAAAGGGGTGTAGATA 1018 30 100.0 37 .............................. ATGCACCCAGTTTTGTATCATGAATTTCTAAACCATC 951 30 100.0 38 .............................. TGCTTTGAAAAGCTCTGGAAACAGTACCCGAATAAACG 883 30 100.0 36 .............................. CCGATGGCTCTTTCCTTCCATGCGGATCACATTCAC 817 30 100.0 36 .............................. GTAAATGCAAAACATTGCACTGACACTTTTGAAGTT 751 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 99.3 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCAAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATTGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAACTACTCAACTATTATTATACTTATTTTTAAATTTATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTCCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCAGGGGTCGACAGAAACCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACAGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATTACCGACGCTAAGTCTAAAGACCCATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 91131-90103 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRN010000004.1 Anaerostipes hadrus strain DFI.4.155 IKKMFIBH_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 91130 32 100.0 33 ................................ ATCTAACAGATATTTGCTTTCTCCTCCAGCAAG 91065 32 100.0 36 ................................ AGAAGATGTCAGAAAGTCCATGGAAGATGAAACAAC 90997 32 100.0 33 ................................ TCAATCAACGGAAGTGATGCACCACCAGGATTT 90932 32 100.0 33 ................................ AACATCTCGTAGCTTTCCGTACTGACCTCTTAC 90867 32 100.0 34 ................................ TGCCATTGTTTCCTCCTAACTTATCGTAATTGTT 90801 32 100.0 34 ................................ CTATCCTCCTATCATTTTTAACAGTGTTTTATAA 90735 32 100.0 35 ................................ TTCTTAATTGGATCAATAAATGGTCGTTTTGCCAT 90668 32 100.0 33 ................................ ACTTTTCCTCCGGATTTCATAATTTTGAATGCA 90603 32 100.0 34 ................................ AAGTGAGGTTGTAAGATTAAGGTTCCCCAAATTT 90537 32 100.0 35 ................................ AATGTGTGGACTTACAATAGATTCAAGGCTGAAAG 90470 32 100.0 35 ................................ CTGTCACAAGTTTTGCAAAATCTTCTACAGATTCC 90403 32 100.0 35 ................................ TATACAACGCATCGGTTGTACCTTGCTAAATACCC 90336 32 100.0 37 ................................ AATGTAATGAGCAGGAATCCATGTTGCACCAAGTTGT 90267 32 96.9 35 ........T....................... AAATCATACAAAGTAAAAGTAACTGCTTCTGCTCT 90200 32 100.0 34 ................................ AATTTTAAGACATAATCCGACCAATTCCCCACTT 90134 32 75.0 0 .............CAA..A..CA....C..T. | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 98.2 34 GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Left flank : ATCCAGCATTTTTGTGGAAATGAGGTGATAAAATCAAATGTTAGTATTAATTACTTATGATGTAAATACAGAAACAGCAGCAGGGAAAAAGAGACTGAGAAAAGTGGCAAAGCAATGTGAAAATTATGGAAGGCGAGTACAAAATTCTGTATTTGAATGCATTGTTGATAATGCACAGTGTGTGATGCTAAAAGCACTCTTAAATGATATCATAGATGAAAATGTGGATAGCTTGCGTTTATATTATTTAGGGAATAAATATCAGACTAAAGTAGAACATTTTGGTGTAGACAGAGGAATACAAGTTGATCAACCATTGATTTTATAGTGATGCGAGGATATAGCAAACATAAAAAGAGTGGGAGATTCGCACTTAAAATATGAAGTAAAAAATAAATTTGTATCTAAAAATAAATAGTATTTGAATGATTTGTAGATATAAGATAAAATTTATTAGTGATATTGAACAAAAAATTAGAAAATTATTGGTTAATATTGCT # Right flank : ATATTTTACTTGGTGTGGGTTATATTAATATTTATAAATTGTCATCAATATTGTAGTAACGATAAGCGGATATACATACAATGGAAGCACAAGAAAGGAAGAAATCAATGAAACGATGTAAAATTACCGCAGTACGGAAAACAGAATATAAAGATCTAATGGAAAAGTATGAAAATCCAATCCAGCATGCCTGCGATATAGAAGAAGGACAAGTATTTATCACAGAAGGATGGAAACGACCAGAAGGATTTTGTGAAAGCGCATGGGAGAGTATTTCACCATTTGTTATGACATTAGCATATGGAGGCAGTGATATTTATGAAGGCTGGATGAAAAACAAAAACTCAGCGATGATCAGTTGCAATGACGGGTTTAGACCGGTAAGTTTTTACATTGAAGTGTTAGATGAGAAAATATATTAACGAGGAGATAAGAAATTTAATATCAACTCATAAATTTCCTAATATCTTCCAAAATAAAAGTAAATTCGATAACATGAG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //