Array 1 34660-27771 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTWK01000004.1 Clostridium sp. AF23-6LB AF23-6LB.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 34659 32 100.0 34 ................................ TTTTTGATTTGAAAGAAAATCTAATGTATATACA 34593 32 100.0 32 ................................ TTAAACACAAAGCATAGGAAAAAAGTCGGAGA 34529 32 100.0 34 ................................ TCCATGAAACTTTCAAAATTTTATGCGAATCTAT 34463 32 100.0 36 ................................ ACGGTTGCGTTTAACAACAAAACAACCCCATGCTTC 34395 32 100.0 33 ................................ TTTTTAAAAAAGGCACTCCGGAGAGTGCCTAGA 34330 32 100.0 33 ................................ AATGAGTGCCTTAACTCTTGTGGATGAGCTTAT 34265 32 100.0 35 ................................ GTTAAGTAAAAAGATCTTACACGCGTCCGAATTCA 34198 32 100.0 35 ................................ ATCCAAATTTGTTTATCATAAATTATGCGGTACAA 34131 32 100.0 35 ................................ CTCATCGTTCACAATGCGTGTAATGTCCAGTGGAT 34064 32 100.0 34 ................................ TACCCTCTAGGCACTCTCCGGAGTGCCTTTTTTA 33998 32 100.0 35 ................................ ATGCTTGACTAAACAAAAGCGCGGAGGTACACCCT 33931 32 100.0 34 ................................ AAAAGACAAGGAAAAGGTTGATACTGCGTTAAAA 33865 32 100.0 33 ................................ TGATTATTTCCCAGATTACTTGCTTGACTGTTT 33800 32 100.0 33 ................................ CATACACAATTAACGCTTTGTGGATACCAATAG 33735 32 100.0 35 ................................ AACATGAACGCTTGTTCCGGACAGGTCGTACTCCG 33668 32 100.0 34 ................................ ATAAATTCATATTATAAACGCGGAGAGTTTCCGC 33602 32 100.0 34 ................................ GCTCGATTACATTTCGGTAATTTTTGAAAATCGT 33536 32 100.0 34 ................................ CCCTCGCGTATACCGTATTATTTGAGTAACAATC 33470 32 100.0 33 ................................ TTCGATGGGGTTTACAAGCTTGGTCTGATTTTT 33405 32 100.0 34 ................................ TTGTAACGGCAATCGTGGGTATTATCTGTGCAGC 33339 32 100.0 33 ................................ TTCTGGCTGGCGTTGATCCTGTCAGTGCTTAGA 33274 32 100.0 34 ................................ ATACACAAGTCAGCTAATTATAAAAACGGCAATG 33208 32 100.0 34 ................................ ATCCTCGATTAAACATAAGAATCCTTCCTACCCT 33142 32 100.0 32 ................................ TGTGACTTTTGGAATATCTTTGATCACTATGC 33078 32 100.0 37 ................................ AGCAGACCCGATGGCAATTGTATCAACGTGGACACCT 33009 32 100.0 33 ................................ AGAAAAGTCCCATTTCATCGTCACTTTTATTGT 32944 32 100.0 33 ................................ TGGTAATAAGTGTCTGAGTGTTGATATTATCTA 32879 32 100.0 33 ................................ ATGCAATCTGTCAATACTTCCCAACTCTTCAGC 32814 32 100.0 35 ................................ AAGTGACATGTTCGATAAAATCCACGAACACCTAA 32747 32 100.0 33 ................................ GGTATTTTACAACGAAGAATACGGCTCTTATAT 32682 32 100.0 32 ................................ CATTGTCCGTACCATCAAAATTATTTTCTTTC 32618 32 100.0 34 ................................ GCCAGGGCATGCTGTTTGCGATGCAGCTTTATTC 32552 32 100.0 35 ................................ ACGTATAAGGTAGGTATGAATATGAAAAGATTTAT 32485 32 100.0 33 ................................ CTCAAAATTTTAGACAATAATACGCAAAGTACC 32420 32 100.0 35 ................................ ATTACTGTATATCGTAAAACGCCAGCAAACAATAT 32353 32 100.0 33 ................................ TGTCATTTGAAGCGCTAGACAGATTTTATTCTG 32288 32 100.0 34 ................................ TGGTGAGGGTGACACAACTAACACAGTAAATTCT 32222 32 100.0 34 ................................ TTTTGAAATCCATGCATCATTATTAATCATTGGA 32156 32 100.0 33 ................................ ATCATACACTTGTAAATTATATTCTCGATGCGG 32091 32 100.0 35 ................................ AGCAGTCAAAGATTCTTAATCCAAACAAGTCACAA 32024 32 100.0 33 ................................ GGTTATCACGACCGCAAAAGTCAATATATTGTC 31959 32 100.0 35 ................................ TACGAACAGGGTCACAAACACACATTCCGTATCCC 31892 32 100.0 33 ................................ TGTTGTATTTGCTAACATAACAACCACTGTAGA 31827 32 100.0 33 ................................ AAGTGTGAAGTCTCAGAATCAAAAGAAATATGA 31762 32 100.0 33 ................................ CGGTTGTTTGTGGTGAAATGAAATGATTTTTTG 31697 32 100.0 34 ................................ TCTCTATCTCAAAGACAATGCATATACAGAGTAT 31631 32 100.0 34 ................................ TTAAATATATGCAGGAACAGAATATGTGGCATTG 31565 32 100.0 34 ................................ AAAACAACATCCCTAGGGGGATCGTCGTTAAATC 31499 32 100.0 34 ................................ CTGCAGGTATCTTCTGTTTGCATCAATATCGATC 31433 32 100.0 37 ................................ TGGACGGTAGAAAGAGCTGCACAAGGAGAATATGCGT 31364 32 100.0 34 ................................ ATTTTCCGTTGAATCTATATCAGATGTATCATCT 31298 32 100.0 33 ................................ ATGCGGAGAATTGCGAATATCCGCGGATACATG 31233 32 100.0 34 ................................ GATAGTGTCGAACAATGATTCTAGACTTTTTTGT 31167 32 100.0 35 ................................ TGAAACCCTCACCGCAACACAGGCTCTTGAAGATG 31100 32 96.9 35 ....T........................... ATGATGAAAAAGATAGAATCTGTATCCGCATAAAT 31033 32 100.0 34 ................................ GTCTGTTTCAGTTTCCTTAACTGTAAAGTATTTA 30967 32 100.0 34 ................................ GTCTGTTTCAGTTTCCTTAACTGTAAAGTATTTA 30901 32 96.9 33 .............T.................. CCAATACATACGGAGAGGACGTTGGATATATGT 30836 32 100.0 34 ................................ CGTTGTGACTGTTCGTGATTGACCAACAGCCATC 30770 32 100.0 36 ................................ ATCAAAATACTCACTTGTGACCTCTGTTGTATTCGC 30702 32 100.0 33 ................................ CGGAAAATATGACAACTGTTGCCTTGAGGGATA 30637 32 100.0 33 ................................ TGAAATCACGCCTTACATATCCAGTCGAAGTGA 30572 32 100.0 33 ................................ TCTTTCAAAAATCCACGATTGGCTTCGATCACC 30507 32 100.0 34 ................................ TTATATAAGTCTCATCTTCCGGGTAATCATCGTC 30441 32 100.0 35 ................................ TCTATAATGGATTTAGAAATTTACTTGCATATCAA 30374 32 100.0 34 ................................ CAAGTCATACTCACAGTAACAAATGAGGATAATG 30308 32 96.9 34 ............................T... CAGTGATCGAAGATATTAACGTCTTCAAGATCTC 30242 32 100.0 33 ................................ ACGTATGGAATTTGGAGGATACCTGTTAAAATC 30177 32 100.0 34 ................................ CGCTGATGCTACAAACAAACTTGGAATTGGTGCA 30111 32 100.0 36 ................................ ACTATTACAATACAATTGAAAATATGCTGACATCAA 30043 32 100.0 34 ................................ TTCTGAGTTCAAGTCCACGTTCACGGAGCAGGTC 29977 32 100.0 33 ................................ CAGTATCGGCTGATACTACAAAGCAGGTAACTT 29912 32 100.0 34 ................................ GGGAAAAATACTGGAAAGCATTACTATCCAGTCC 29846 32 100.0 34 ................................ ACGTGAAACATTAGAACATGAAGAAAGTGAGGTT 29780 32 100.0 33 ................................ TGGCGAGGGCGACACTACAAACACGGTAAACAG 29715 32 100.0 35 ................................ CTCCACAATCCTGTATCTGTATTTACGATCGAACA 29648 32 100.0 35 ................................ CTGAAAAAGAACGCATTAAAACATATAAACAGCCC 29581 32 100.0 35 ................................ ACTTATATATCATTAAGAAAAAAGGAGAATGAAAA 29514 32 100.0 33 ................................ TGTACATGATCGCAAAGTAATCATCACGGCGTG 29449 32 100.0 34 ................................ ACCACTAACATTTGCGATTGGGTATGGTAATCTA 29383 32 100.0 35 ................................ ACTATGCCGGAGCTATCACCAAAATCCCACCGAGG 29316 32 100.0 34 ................................ CCCTCCACACAAGCGGTTTTCTGCGCGCGTCTTG 29250 32 100.0 34 ................................ TCCGTTGATATAATTAGCATTACTGTTGTTATCG 29184 32 100.0 33 ................................ TAAGATTTGTGGTATTAAATCTTTTATAGTCTG 29119 32 100.0 34 ................................ ACTTTCAACTTGAGCTAGCGTACCCCTTGCAAGT 29053 32 100.0 34 ................................ CAACAACAGTTGCTTCTGCTATACAATATTGTAA 28987 32 100.0 35 ................................ CATCGTCTTGTACTGCCTTATAATTGATATGTACT 28920 32 100.0 35 ................................ TTTTCATCAAGCTCCAGCTTTGCCTGTCTTGCCTG 28853 32 100.0 33 ................................ GGCGCATCTTTTCGGGTGATGATCTCGACCTTA 28788 32 100.0 33 ................................ AGATGTAAAGGTTCCATTCCTTATGTGCTTCGG 28723 32 100.0 34 ................................ TAATTACCAAAAAGGAAAAAACGACGTTGGTTAA 28657 32 100.0 36 ................................ TATTCATATCTCCTCGGTTTGGGTCCAGCTCATCAA 28589 32 100.0 33 ................................ ATTCCGTATCACCTCGCATTGCAAGCTGTATAA 28524 32 100.0 33 ................................ CTTTGCTCTTTGCATATTCAATCAGATGCCAGT 28459 32 100.0 35 ................................ CCCGCAAGAAAACGGTTACCATGCGTGTAAGCGCC 28392 32 100.0 34 ................................ CGCTAATTTTAGTAAAAATAGCGTGCCTGCGAAC 28326 32 100.0 34 ................................ TTCGAATACTGGTTATCAAGGGACTGCGATTACC 28260 32 100.0 33 ................................ AACGAAGAACTTCTTGGAATCGGCGAATATGAC 28195 32 100.0 33 ................................ CTGTACAATGTATTTCTAAAATAGCATTATCTG 28130 32 93.8 34 ...........T.....G.............. TTGTGGCTGTTCCGGTAGTTGGTGCCAGATGTGT 28064 32 96.9 34 ...........T.................... CTTTTTGAACAACTGTTTTATAACGCTGTAGTTT 27998 32 96.9 33 ...........T.................... GTAGAAGTGTATTAGATTTTTCGTAGAAGTGAA 27933 32 100.0 35 ................................ GTTAAACTTAAGTTTTTACGAATAGTTGTATTCAT 27866 32 84.4 32 ..........T......G.A.C.A........ GGTATAGCTGATCAGGTCGATGAGCAGAGAGA 27802 32 90.6 0 ....T......T....A............... | ========== ====== ====== ====== ================================ ===================================== ================== 105 32 99.6 34 GTCACTCCCTACGCGGGAGTGTGGATTGAAAT # Left flank : ATGGATATCCACCATTTTTATGGAAGTAAGGTGAGATACATGTTGGTATTAATAACATATGATGTTAATACGGAAGATGCTGCTGGAAGAACCAGACTTCGAAAAGTGGCAAAACAGTGTGTTAACTATGGAAGAAGGGTTCAGAATTCTGTGTTCGAGTGTATCTTGGATAATGCACAAAGTGTGACATTGAAAGCAACGTTAACAGATATTATCGATGCAGAACATGATAGCATCAGATTCTATTATTTGGGAAATCATTATCAAACAAAAATTGAGCATTTTGGAGTAGATAGAGGAATCGCAGCTGACCAAGTGCTTATAGTTTAAAGTGCGAATGTTAAGCGTACATAAAATTGTTGAAGGATTCGCACTAAATAATATGATATTAAATCCTTTTTTATAATGAGTATTTTGAAAAAAAGGAAAAAAATATCAAATAATGTTTAGTTTTAACAAATTTCATCAATTTTTAAGGCAGAATATTGGTGAGATTTGCT # Right flank : CTCCCAAATAAACTATAACTATGATTATTACGCTACACTCCCTATATGAGAGTGTAGTTTAATAAATGTCAAACATAGAAAAATAGAAAGAAATCTGAGATTCCACTAAAAAATAGACTTTTAAAACGCATCATTAATAAGGACTGTTACATTCTAAAAATTAGTAGAGATTTTGTTCCTGAATACTCTATTTTCCCCCCACCACAGCCTTACTTACCACATCCCCTATATGCGATTCGGCTCCTGTGGCGGGGGAGAACTTTGTTCTGGTTCCTTTTTGTTACATGCTAGAATGTCTTCTGCAGAAATTCCGCATGCGATTTATAGTAGCGATAGTATTCGGTACCCTTTTCCTGACCATACTTGGTTACGAAGAGGTTGTGAATTTCCCGAAGGTTTGCTTTATGCGGGTATAGTTTTTTATAGAAATCATCAATGAGAGCAATACCGGCATTAGAGTAAACAATCGATAAGAATTTACGGTATTTTGTTTTCTTTTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTACGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCGCTACGCGCGAGTGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //