Array 1 2995-2531 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYC010000119.1 Streptomyces sp. McG3 NODE_119_length_22609_cov_29.2915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2994 37 62.2 36 ACCAGTAC..AGG.CG......G.............. GTCCACCGCAATCACCGCCGGCCCGACCAGCTCGCC 2921 37 97.3 36 ................A.................... ACCAGGGCCAGCGCGGCACCGACCCCGCCGACAGCG 2848 37 91.9 16 ..........C...C..T................... CCCGAGAACTGGACCT Deletion [2796] 2795 37 73.0 37 TCC...CC...A.AC....T..G.............. GCCGGGGGCGAGCTGCTGTCGCTGGGAGGCCTCTGGA CGGTGCAG [2771] 2713 37 91.9 35 ..........C........C..G.............. TGCCACAGGTCGAGGTACCCTCCCGACTCCGGGCG 2641 37 100.0 37 ..................................... TCCCGGGCCTGCTCGGTACGGGCGACGGCCAGGTGCT 2567 37 89.2 0 ..............C...C...G.............A | ========== ====== ====== ====== ===================================== ===================================== ================== 7 37 86.5 33 GTGGCGGTCGTCCTTCGGGGCGACCGAGGATCGCAAC # Left flank : CCCGATTCAGCCCCGGGGTCGACGGGGTTGCCGCGCCCGGCCGCAAGAGCATTATCCGGAGTCTGGAGCGCGGCAACTTCGTGTACCGGCAGATGGACAACTCCGGGCCGCCGAGCTGGTTCCAGGACCCGGGAGAGTGGGTGGACGGGTACTGGGACGCGAAACTGCGCCTGCACGCGGTCTGCGAGGTGGAGGGGTATAAACCCTGGATCGTCGTTGCCGAGGTCGAGAACCCGGGGATGAGGTACATCTCCGACGGCTCAGACGAGATGGAAGTTCCGGAGCAGTACCGCTGAATCACGACTGCCCGGGGTTGAGGCTCCGGGCGGCGCCGGAGGCCCCGACCCCGGCGGCAGGCCCTCGCCGAGTGCCGCTGAACGCCACCGACCTCGGGCCAGCACAAGCAGCTCACCCGGAGTCGACTCGCTAGCGGAGATCACACACGGTCACCAATGGCCCGGGTTCCTCGGGGAACTGGCGACAGTTGAATACGCGAGCTG # Right flank : GAGGACCAGGCCGTCCGGATGGAGCTGCGTGGAACAGACCCCCCCGGCGACCGTCGGCCCTGCGGGCGAACCGGGCCAACTGCCGGTCGTGGTCCACGTCGCCGTCGCTGGTGAGGACCTTGACGGCCACCTGCCGGTCGACCTTGAGATCGTGAGCTTTCCAGACCTGACCGAAGCCGCCTGCGCCGATCGGCTGGATCAGCCGGTGGTGCCCGTCCAGCACAGTCCCTTCCCGCGCAGTTCCCCTAACCACCGCTGGGGACGGTTTACCCCACGTGTCCCTGCACGCTAGGCCGAACAACCATCAAGGCGTGCTGCGCGGCTTCAGCCCGCCCGCCGCCCCGGCGACTGACAAGCCGGTGCAGAAGACCCTCCGGCCAGCATCGGGCGCGAAGGTCGTTCAGGTCTCGACTGGTTTCGGCGAGAGTTGAACCGTATGGGTATCAGCCGTTAGGCGGGTTCCCGGCCATGCGTCCCGGACCTGGGGAAATCGGCTGGGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.33, 5:-1.5, 6:0.25, 7:-0.23, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTTCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.60,-15.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-36] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 10033-9638 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYC010000119.1 Streptomyces sp. McG3 NODE_119_length_22609_cov_29.2915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 10032 29 86.7 31 ..A-........G................C TCCGCGCCACGCTCCCTCGGCACATCGCGTT 9972 30 100.0 31 .............................. TTTCCGCAGCGTCCATCCACGGCCGCCAGCC 9911 30 96.7 31 .............................T TGAGGGAGTCCTCGGTCGTCAGCCCGACACT 9850 30 100.0 31 .............................. ACCTCGCGCAGCCGATCGGCGGCCCCGACGC 9789 30 96.7 31 .............................T CCGCCGCCCGTGGCCACGTCGACCGGGAACT 9728 30 86.7 31 .............CC.............GC AGCCGAAGCCGAGGTCACCGCCGTCGCCGCG 9667 30 90.0 0 .............CC..A............ | ========== ====== ====== ====== ============================== =============================== ================== 7 30 93.8 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : GACTGATCGGCTCGGGCATGCCTTCCGGCAGACGATCGTCGAAGACGGTTTCCATCAGCACCACGCCCACGACGGTGAGGGCCATGAGCACTGTCCCTCCTATGAGCAGGACGGAATGGACGAGGGGCCTCGTCGAGCGACTGCGGCGCGATTCGGGCCGTTGAGGCTCAGTGCTGGGCGGCATGGATCAAGGGGATGCCGGGTGGATGTCGGGGCGTCCACCAGTTCCGGTGAACCAGCTTCTGCCCCCGTGCGGCCACCACGGCTCTACGATGGGTATCCGCGCCGATGCTGAGCTGCCGTGCCGGATCACACCCCGGACTTTCCGCCGAAGACCCCGCAGCCGCCGCTCTCGCCCCGTACACCTTGCGATCCTCGGTCGCCTCGAACGGCGACCGCCACAGCAGGTCGGCGGGGCGGTCAGCGGCAGGGAAGGGGACCATCCCCGCGGGCGCGGGGAGCAGGTCGCGCCGGAGATCGACCCGGCTACCGGCGTGGGA # Right flank : GGCCGATGATCTGACCGGCGCCGACTGCGGAACTCCTGATTGATTCAGCCAAGGTTGAATCGGAGCCTCATCTGAGTGCTGACCAGTTCGTAGCCAGCGAGGTCGGGGGCGCTGAATGGGTTGGGCAGGACGGTGATGTTGCGGCGGTCGCGGTCCAGGACGTCAGAGACGTACACGACGAAGTACGTTTCACCCGGGGCCAGGCGGGAAGCGCGTCGTACCTCTGACTCGCCCAGGATGATCTCTCCGCTGTTGCCCGTGGACGACTTGACCTCGTAGAGGTAGGTCGTGTTGCCGTCGTGGATGACGAAGTCGTAGCCGAGCCGGTCGTCCCCGGGCTGGGCGCCGGCGAGTCCGTGCACGCGCAGGCTCGACTTCCACGAGTTCTGTGGTTCGACGCCGAATTGCTCGTGCAGCCACGTGGCCACTGCTGCCTCCCCCGCGAGGCCCACCGGCAGGGCGCGGTCCTGGTCGTTGCCCACGGCCTGGTAGGAGCCGCC # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5220-4581 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYC010000418.1 Streptomyces sp. McG3 NODE_422_length_5634_cov_36.2117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5219 29 100.0 32 ............................. TCCCCGCGGATTGAGCAACTGCGTCGCAGGAG 5158 29 100.0 32 ............................. GCGGCCAGCTCGCCCACCTCCTGAAGGACGCG 5097 29 100.0 32 ............................. CCACACGCTGTACCCCCAGCTGCGGAGTACCC 5036 29 100.0 32 ............................. CGGTGCAAACCGTGACACGGACTGGGGGGTGA 4975 29 93.1 32 .....................T..T.... AGGTCTGTCGCGCTGATCGAGACGCTGCTCTG 4914 29 89.7 32 ..C..................T..T.... GGCTGGGAGGTCAAGGTCCCGGACCCGCGTGA 4853 29 89.7 32 ..C..................T..T.... GTCTGCGGCATCCTCACGTCGAGCGGCGACGT 4792 29 86.2 32 ..C.....T............T..T.... AACCGGTGGCAGCCGCTCAACGGCGGGCACAG 4731 29 89.7 32 ..C..................T..T.... TGCCGGCCGACGGAGATCCGTGCGAGCTGATT 4670 29 82.8 32 .CC........T.........T..T.... AGCTTGCCGCATTCGCGGGACTCGGCTCGGGT 4609 29 82.8 0 ..C..................CC.C.T.. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 92.2 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CCGGACCCCCACAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGTACGGCTCACTCCGGAGCCGCCGAGGACTCGCCCCGCCCCTCCGAGATCGCCGACGTCAAGGCACACATGAGCAACCTCCGAGACCTGCTCAGATCAGTCTGACCTCAACAATCCGGCTTGCCTCGCAGCCTCGGCATGCCCAAGCCCTCAGCAAGATCTACTCAGTTAAACCGAAGCCCGCCGCTACGGAACGATGTCCACCTTCCCCTCCAAGACACCGCCCCTTGCGGCCCAGAAAGGGCAGAATCACTCCCGACGCAGTCAGTGCTTCGAGCAGAGCCATTTACAGAACAAGGGGCGATATGTCCTCTTCTCGAGAAGTAGCCAAAAACTACCCCCCGGCTACATAGACCCGCAGGACACGAAC # Right flank : TGGGCCCGACCGCTCCTGCTGGGCACCTAGCGCATCGCAGCGCGACGGAGACCTCGCGTCGACCGTTCACCGTCGCCCCCGGCCAGGTCCGGTCGACGCCCATGGCGTTGCGGCGGGCACCCGGGAACAGCAAAGCGCCCGGTCGCCGTACAGGGGATGTACGGCAAGCCGGGCGCTCCGGTTCATGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCATCCGCCGCGGTCAGGGGGAATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGCCCGCCGGGTCCTGCCTGGTCCCGTTGGGCTCGGTATCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCTTAAAAGACGCATCAGTGATCGAAAACGGCCACCGGATACGGCCATCCGTGCGGATACAATCGCCCGATCGCACATGGGGTC # Questionable array : NO Score: 5.48 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : GTCGTCCCCGCGCGTGCGGGGTTGTTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //