Array 1 3870590-3869303 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAABGZ010000001.1 Xanthomonas citri pv. citri strain LL098-02 contig1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	===============================	=====================================	==================
   3870589	    31	 100.0	    37	...............................	AAATGCTTTCGACGCGCATAAAGCGCTGGCGCAGGAG	
   3870521	    31	 100.0	    35	...............................	CTGTTCAAGCTCCGCCGCCTGATCCGCTTGCCGAG  	
   3870455	    31	 100.0	    34	...............................	CTCGGGTTTCGGGATGTGCTTCAGATCTGCGTCG   	
   3870390	    31	 100.0	    35	...............................	CGCTGCACGGATGCGCCAGGCGGCGAGGCGATCAT  	
   3870324	    31	 100.0	    36	...............................	TCGAGCGCATCGATGACGGTCACCCATCCCCCAATG 	
   3870257	    31	 100.0	    36	...............................	GTGCCACCGACAGCGACGCACGTGGACCTGCAGATC 	
   3870190	    31	 100.0	    34	...............................	CTCTCTCACGCCGCGCGTGCGAGATCCTGCGTGC   	
   3870125	    31	 100.0	    36	...............................	GCAGACTGCCGAGGCCGGCATGCTGGAGGGGCGCCT 	
   3870058	    31	 100.0	    37	...............................	GGGTTAACAACGCCTTGAAACGGCTTTGCCGCGACGC	
   3869990	    31	 100.0	    35	...............................	GCCATCATGCTTTGAATGCGCTTACCCACGGCGAA  	
   3869924	    31	 100.0	    35	...............................	GCGGATATGTGATTAGACCCTTTTACGACTTTCAG  	
   3869858	    31	 100.0	    34	...............................	TCATTGAACCCAAGGACCACTTCGCAGGGCGACT   	
   3869793	    31	 100.0	    34	...............................	TGTCGAGCGCGCACTGCTGCCGCGATGGCCGGAA   	
   3869728	    31	 100.0	    35	...............................	TGGTTCAGGGCTGGAAAGACTTGGATGCCCGCATC  	
   3869662	    31	 100.0	    34	...............................	CTGACTATCCCTGCATAGGCCACGACCTGCGAGG   	
   3869597	    31	 100.0	    36	...............................	AAGAAGACCAGTCTGCGGCGTCGCGGCATCTTGGGG 	
   3869530	    31	 100.0	    34	...............................	CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT   	
   3869465	    31	  93.5	    34	T...........T..................	CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT   	
   3869400	    31	  93.5	    36	T...........T..................	CATGCCATATGCGGCGAGATCGCACAGCAGAAGGAA 	
   3869333	    31	  96.8	     0	.G.............................	|                                    	
==========	======	======	======	===============================	=====================================	==================
        20	    31	  99.2	    35	GTCGCGCCCTCACGGGCGCGTGGATTGAAAC	                                     	       

# Left flank :   GGCTCAAGTCCCATGATGATTCTTGTAAGCTACGACGTCAGCACCAGCTCTCCCGGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGGGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTACGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAAAAAAAAAAAAATAAATACATAGCGGATTCACGGGGTCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGGGGGG
# Right flank :  AATTTAAACTCGCCCCGCCAGCCGGACGCTGACGAGGTGCAGGTTGGACATGCTTGAGGCCTGCGTATGGCAAAGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGAACCATTATTTGACGATGATGGTCTGAGGCGTGCCTGCAGGCTTGCCGTCCACCATGACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCAGCCACCTGGCCATCCTGGTAGGTCAGCTTTGCCGACACGGCCACGTTGCTCGCGCTGCCGTCCGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTCGCCGGGGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACACTGGACACCGTCACTGCGCTACCCGTGGCAGCACCGCCATCGGTGCTGGCCGCACCGGTT

# Questionable array : NO	 Score: 9.22
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGCCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.41   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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