Array 1 20259-30524 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPQA010000013.1 Corynebacterium phoceense strain UFMG-H7 NODE_13_length_77808_cov_16.470617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20259 29 100.0 32 ............................. TCCTTTCATGGTGTGTTCAGTGGCCCTGGCAG 20320 29 96.6 32 ............................G TCCGCGGTGTACAGGGGCCGGGTTTCCGGGTT 20381 29 100.0 32 ............................. CATCATCGGCACCGTCGCGTTCATGTTCATCA 20442 29 100.0 32 ............................. GCTTGGAACACTGTCACAGGTGCTATCCACGG 20503 29 100.0 32 ............................. AATGGCAATTTTGTTGACGGGGTGCGTCATTG 20564 29 100.0 32 ............................. AATCCGCACCCTGATGCGCCGCGGTGATATTG 20625 29 96.6 32 ............................T CCTGCGAGTACGCGGTTGTTCCATCTGACCAA 20686 29 96.6 32 ............................T CAATCACAGGAACCCGCCACCTTCATTCGTTC 20747 29 100.0 32 ............................. TCGATTCGCTCGTCGGCGTAGCCCTTGACGAT 20808 29 100.0 32 ............................. CCCAACCCCCATCTGAAAGGACACCCCATGTA 20869 29 100.0 32 ............................. CAATGGGCCATTTCGAAATCCGCCGCGACGAA 20930 29 100.0 32 ............................. CTGGGTTGCATTATCTACCGCGCTTGCATATA 20991 29 100.0 32 ............................. CCGCACAGGCCTCACTCCATCAAGCGTAAACA 21052 29 100.0 32 ............................. GTGCGCGGAGACCAAATCCGGGGCGGTTTCCG 21113 29 100.0 32 ............................. TCGCGCAGGGTCACCGGGTCGGTGCCCGCGGG 21174 29 100.0 32 ............................. TCCATCGGCGCGGCCAGCGACGGCGTCGAGAA 21235 29 96.6 32 ............................G ACTTCGAGGTCGCTGCCTCCGACCAGCCAGGC 21296 29 96.6 32 ............................T AATCGCGTGCCATGGTGTCCTCCTAGGATTTG 21357 29 100.0 32 ............................. TATCGGCGCAGCTAAGCAGGTTGCGGCGTGGG 21418 29 100.0 32 ............................. AAGGCCCGAGTCCCAGCCGTGCCAGCCGTGCG 21479 29 96.6 32 ............................G TGGGGTTACGCATTGGGGGTTTCCTCGGGGTT 21540 29 100.0 32 ............................. CAGTCATCGGAGGCGTCCTCATCTGGAAGACA 21601 29 100.0 32 ............................. ACCGGGGGAGTTAGCCACCGTGATGCCCCTCG 21662 29 100.0 32 ............................. ACCGGGGGAGTTAGCCACCGTGATGCCCCTCG 21723 29 100.0 32 ............................. TCGAAGACCAAGTACAGACGCTACGCGCCAAC 21784 29 96.6 32 ............................G AGTTCCTGGGCTTTGTCGTTGATTGCTTGCGG 21845 29 100.0 32 ............................. GCCGGTGTCGCGGTGGAGGTCGAGCATGGCGA 21906 29 100.0 32 ............................. GCGGCTGCTCCAGGACCACACTCACAGCTAAC 21967 29 96.6 32 ............................G CGATGGGTGGCTAATCAGCATGAAATAAAGGT 22028 29 96.6 32 ............................G GCTGGGGGCATGGCGATGATGAACGCGAAGGC 22089 29 100.0 32 ............................. CTGGTTCGCCCAACTCGAAGACCAAGTGGAGA 22150 29 100.0 32 ............................. GAGGGTAGGGGAGGGCGCATGTCGGGCGGGGA 22211 29 96.6 32 ............................T CACCCCAGCCCATAAACACACTCCCAACCCCA 22272 29 100.0 32 ............................. GCGTGAAAATGCACCCTCTGCGCTCCCGTGTA 22333 29 96.6 32 ............................G CGTAATCCCGCAGCTGCGTCGCATGCCCGTAC 22394 29 100.0 32 ............................. GCTTTTTGCCGCATTGCGAATCGCGCGATTCA 22455 29 100.0 32 ............................. TGGAGATGCAGGAATGACCCCCGAAGAAGCAC 22516 29 100.0 32 ............................. CAAAGGCGGTTTAGCGATAGCAACATTGAACG 22577 29 96.6 32 ............................G AAGAAGCAGGGCTACGGATACCTGGGCAACCG 22638 29 100.0 32 ............................. AAGCGTGAATATTCCGCAATCTTCGGTTCACG 22699 29 100.0 32 ............................. CAGACTCATAGAACGCTCTACAAGCTGCTGAC 22760 29 96.6 32 ............................T GCGACCAACGGAACCAGAACCGGAATAGTCCG 22821 29 96.6 32 ............................G TAATGCATTACACGACCTTCAACTTTGGGGTA 22882 29 100.0 32 ............................. TGCGCGAGATTCAGGAACAGCAGGACAACCTG 22943 29 100.0 32 ............................. AAAGAAGCGCGTTCTTCTTCCTATTGATGTGA 23004 29 100.0 32 ............................. TGCGCTCACTTCTACTCGCCATGAGTGGGGTT 23065 29 100.0 32 ............................. ACCGGCAGTCAACAACGCCGACCCGAAGTAAT 23126 29 100.0 32 ............................. TGATGCCAGCGCTTGGATACCCGCGCTGGGCT 23187 29 96.6 32 ............................G TCCCCGGACTACGCCGCACCCAGATGATAAAG 23248 29 100.0 32 ............................. TGGACGGCGGAGCAGGTCCGCGACCTGTGGAA 23309 29 100.0 32 ............................. GCCGTTAGCCGCCAACTGCGCGGTCATGTTCT 23370 29 100.0 32 ............................. ACCGGGCGCGTGGTGCGGCGTGGTGTGTGTGG 23431 29 100.0 32 ............................. CCCGACGCCATGCGTAGCCGCACCGGCGGTCG 23492 29 96.6 32 ............................T CAAGCGGGGTGGTCATATTTTTCTCCTGCCTT 23553 29 100.0 32 ............................. CGTTTCGTGGTTCGCCCCTGTTCTGCGTGCGT 23614 29 100.0 32 ............................. CAGGCTGTCATGGAGCTTGGCAATGAGCCGGT 23675 29 96.6 32 ............................T AAACCTACTCATCGATGACCTCCTCAATGGCC 23736 29 96.6 32 ............................G GCTGCGCGCATGGCGTCGGTGTTTCCGCTGAA 23797 29 100.0 32 ............................. CAGGGCGACTTCCACCCCGACTCCTGGAATAT 23858 29 100.0 32 ............................. TCGTGCATTCAGATTGCCGGCCATCTCCTTGA 23919 29 100.0 32 ............................. CGCTCAGCAGGCCCACCAATGACAAGGCGCGC 23980 29 100.0 32 ............................. CACACCACGATGGGTGAAAGACTCAGCGTCGC 24041 29 96.6 32 ............................G TTTGGGAGCGCGATCTGCGAATGGATTATTTC 24102 29 100.0 32 ............................. GGCACGCCCTTCGCACGCAGTGCTGCGAGATG 24163 29 100.0 32 ............................. CCGCCCTGGGCTTGCTGCTGCGCGGTTTGCTG 24224 29 100.0 32 ............................. ACCCCCGCCACCGTCATGTTTACCCCGGAGGT 24285 29 96.6 32 ............................A AGACCTCAAGCCAGGAGCGATTTTCTCAATCG 24346 29 100.0 32 ............................. CTCGGACTCGACTACACGGCGGCAAATGAACC 24407 29 100.0 32 ............................. TATTCATCGGTTTCATCCTTCGTGATGAGTCC 24468 29 96.6 32 ............................A TGTACTGGCGGGAAACAACCGACCGTAGCAGC 24529 29 100.0 32 ............................. ATGTGGAGCCGGTGGACGTAATCACCGCTGGC 24590 29 100.0 32 ............................. CCCTGCCGCATGCGCGGTCAGGGGCTTGGTTT 24651 29 100.0 32 ............................. CAATGACTGCTTCAATAGCCCATATTCACGAG 24712 29 100.0 32 ............................. CTCGGTTACTGCGTCAACCGGGGTTACAAATA 24773 29 100.0 32 ............................. CGACCGTAGCAGCCTTTCCCGCGTGGACGATC 24834 29 100.0 32 ............................. TGCTGGACGGTTTGGCGGCGTGGCCATGCCCA 24895 29 100.0 32 ............................. TTTACGGACGGCCAACCGCTCAGCAGGCCCAC 24956 29 100.0 32 ............................. GCCTGAGTACGCATTGCGTGAGTATGGCCCGG 25017 29 96.6 32 ............................G TAGCTAATGCCGCGTGCCAGGCCGAGGACACC 25078 29 100.0 32 ............................. CTATCGACCGCTACCAATCCGCCTGCCAGGTT 25139 29 96.6 32 ............................G TCTGGCGGGTAGCTTTGTCGCTTCGGCGCGCT 25200 29 96.6 32 ............................G TCCTCATTGGTGAGCTGGTCGAGGTGCGTCCC 25261 29 100.0 32 ............................. CTCACCATTAGCGTCAGTCATTCCATTACGGA 25322 29 96.6 32 ............................T CTACGGCTGCTGAGGCCTTAGAAGCGACGCAG 25383 29 100.0 32 ............................. CGGCGCGGGGATTGACTGTGTCGCAGGTTTCG 25444 29 96.6 32 ............................G GCCATTCAGTATTCGGGATTCTCAGATGTTGA 25505 29 100.0 32 ............................. GCGCCCTGATGTACGCCGGCGCGATCATCCCC 25566 29 100.0 23 ............................. TCGTCCATCTGCTCAAGCTGCTC Deletion [25618] 25618 29 100.0 32 ............................. GACTCAAGTAGCTTTGCTGTCCCGTCACGGTC 25679 29 100.0 32 ............................. CCGGCGTGCAGTCCATGAAGATCCCTGAGCTA 25740 29 100.0 32 ............................. TTGACGACGACGAAACCCCAGCACAACCCCGG 25801 29 96.6 32 ............................G AAGCCGGTTTGGGGATTATGGCCCCGCGATTT 25862 29 100.0 32 ............................. AACAGACTACACATCATGTAGCAATATCGCAA 25923 29 100.0 32 ............................. AGGATGACGTTTACTGGGCCGATGAAAAAATG 25984 29 96.6 32 ............................G TAGACGAAGCGATAATCACCATGCTCGAAACC 26045 29 100.0 32 ............................. AAGCGTGAATATTCCGCAATCTTCGGTTCACG 26106 29 96.6 32 ............................G CGGCCTGGGACGGCTTTAAGGACGCGATCCAT 26167 29 96.6 32 ............................G TGATACGGAGCGTGCGCTCGCGCTGTGCCCCC 26228 29 100.0 32 ............................. TCCACCAATGGTGGTGTGGCCCCGCACCTGCA 26289 29 96.6 32 ............................G TCGCCATACTGGGGGTCGCGGCGGTTGCTCTC 26350 29 96.6 32 ............................T CCTCAGACTTAGAGCAGTCAAGGAACAGCGCG 26411 29 100.0 32 ............................. TATGAAGCCTTACCTGTCTGCGCTGGGCACTG 26472 29 96.6 32 ............................G GCCCGAATAATCCTTAACGCCGTTAGACGCCA 26533 29 96.6 32 ............................G GCCCGAATAATCCTTAACGCCGTTAGACGCCA 26594 29 100.0 32 ............................. TCGCCTGGTACGGGCTTTGACACTCTCGCTAC 26655 29 100.0 32 ............................. CATCATCAATTCTGCAACCAATAAGCGCCGTG 26716 29 100.0 32 ............................. GAACTATCGACCTCGCGGGTGCCACGCTTACC 26777 29 100.0 32 ............................. TGGTATACCGTGAGCTCGCCGACCAGCCCTGG 26838 29 100.0 32 ............................. CACATTAGCGAGTAAGTGATCTGTCACGCTCC 26899 29 100.0 32 ............................. CCCTCCGCGTGAGTGAGTAGGTTGCAGAGCAG 26960 29 96.6 32 ............................G TCTGTGGATGCGGTCACGAAGACTCAAGCGGC 27021 29 100.0 32 ............................. CCATGGCGCTAAGCTTTGAGGACTACCGTAAG 27082 29 100.0 32 ............................. AAGCTGATCGACGTTCAGGCCGAGCAGGCCGA 27143 29 100.0 32 ............................. ACGGTACAACGAAAAGAAACACCCCGCTGTTA 27204 29 96.6 32 ............................T TACGCGCAATATCACCGTCAATGCCCTTAACG 27265 29 100.0 32 ............................. CCGCCCTGGGCTTGCTGCTGCGCGGTTTGCTG 27326 29 100.0 32 ............................. CGGCACCATCTCCCCCACCGCATCAGTCTTAA 27387 29 100.0 32 ............................. TGGCGCCGTCCAAGCCGACTCAAGAAACAACC 27448 29 100.0 32 ............................. GCGCCAATAATTGCGCCCGTGGTTAGTGTTTA 27509 29 100.0 32 ............................. GGACTGCGCGTGCTCACGGGCGACGCGTTCAC 27570 29 100.0 32 ............................. GGCGTGCTCGAGGTTGTCGTGCCCGCGCTGGA 27631 29 100.0 32 ............................. GGTGCAGGCAGATTGTGCAGCAGATGTTCCTC 27692 29 100.0 32 ............................. CACTTGGTCAATATGGCGACGCCACTCAGCTA 27753 29 96.6 32 ............................G GCCGCCGCGTGCGTCGCGCGGCCGATGTTCTA 27814 29 100.0 32 ............................. CGTAGACCGCCCAGCGGCAGTCCTGCGCGGAT 27875 29 96.6 32 ............................G TCTCACCTCACCCGGGCGCTTACGGCTATCGG 27936 29 100.0 32 ............................. GGTATGCGGATATGCCGCCGCTGCCGCGATAA 27997 29 100.0 32 ............................. ACCGCCCGCACCGTCGCAGCGGCGTGCGGTGC 28058 29 100.0 32 ............................. TTTGGCCTGGGGCCGCAAACATGGTTCGTCTC 28119 29 100.0 32 ............................. ATTGTTAGCCCCTAGCGCCCCGACCTGCAACA 28180 29 96.6 32 ............................G TTCCCGGAGGAGGTGCGCTAATGAGTGTCACG 28241 29 96.6 32 ............................G TCGGTGCCCCAGTGGGTCGTGCCCCAGCGTGG 28302 29 100.0 32 ............................. TAGTCAAGGAGAAGAAGTAAATGGCTAAGCAC 28363 29 100.0 32 ............................. CTGGAGGATGTACACAAGTTCGCCGCGCCGGG 28424 29 100.0 32 ............................. GACACCGACGCTATCCACGACGCGCTCGAGGA 28485 29 100.0 32 ............................. GGGTTGTCTGCCGTTACCGGCTCGACCTCGTC 28546 29 96.6 32 ...........T................. CCCGCCCGGCCGTGCTTCCACGTGAATGTGGT 28607 29 96.6 32 ............................G ATCTACCGTTTAGCGCGGATCTAATCCCTAAT 28668 29 100.0 32 ............................. TCATAATTCCAGGGGGAATATTTATTATGGCA 28729 29 100.0 32 ............................. TGACCTATTCGAAGATATTGCTATCGCGAAGC 28790 29 100.0 32 ............................. CGTAGACCGCCCAGCGGCAGTCCTGCGCGGAT 28851 29 100.0 32 ............................. CCGAACAGCGGAATTTGTGTTATCGACTACGG 28912 29 100.0 32 ............................. GCCCACGTAGCAGGCCGCATCGTAGACATCAA 28973 29 96.6 32 ............................T GTTACGGAGCTTAGCCCTGACGTTATGCACGC 29034 29 100.0 32 ............................. AGCTCACCGGCGGGCGTGACGCGGGCGACTAC 29095 29 100.0 32 ............................. TCGGCAAGGACTCGCAGGGACGCAACCTCACC 29156 29 100.0 32 ............................. TCGCTAACGCTCTTGCCGAACTCCGCGAAGTT 29217 29 96.6 32 ............................G GCCAATAATGCAAGCATTGGCACGTGGATTAA 29278 29 96.6 31 ............................G CCCATAGCGCCAGCCTGATTGACAGTTTTTG 29338 29 100.0 32 ............................. CCCCTAGTCATAAGCTAAAGCTGGGGTCTGAG 29399 29 100.0 32 ............................. TAAAGACGCCCCGCTTTTAAACCTAAAGACTA 29460 29 96.6 32 ............................T GATTGGCTGGGCAGGGTTGGTGACTATGGCGA 29521 29 96.6 32 ............................G TCTCAACGGACATATTTGGCTCCTTACGAGGT 29582 29 100.0 32 ............................. GGTTCCCCTGCAAACATGTCCGTGGCAACGGA 29643 29 96.6 32 ............................T GCACGAAACACTACAAGGTATCGCCCGCGATC 29704 29 100.0 32 ............................. GAGCTATCAACTTCACGGGTGCCACGCTTAGA 29765 29 96.6 32 ............................G GCTGTATTTAGCGGCAATACGGACGCGATGAA 29826 29 100.0 32 ............................. GCCGTTAGCCCCTAGCGCCCTGACCTGCAACT 29887 29 96.6 32 ............................T AGTACCCCATAGTACTGGCTAGTACCTAATCG 29948 29 100.0 32 ............................. CACCCCGGGCTTACCTCGACGCCCTCGACGTA 30009 29 100.0 32 ............................. CGAGCAGGGCACACCCTCGCGTTATGCGCGTG 30070 29 96.6 32 ............................T CAGCCGCCGCGCGCCGTCCGATAGGGGCGCGC 30131 29 100.0 31 ............................. CGCCGCGCCGCCCGCGCCGTCGTCGCCATAC 30191 29 100.0 32 ............................. CGCAGGTCAACCCGCCCGCCGGCCGTGAACCC 30252 29 100.0 32 ............................. GTCACGGGGATCACCCGCGCTAACGTTCACGT 30313 29 96.6 32 ............................T TACCCCCGGCTTGCACGCTAAAAGGGCGCGCG 30374 29 100.0 32 ............................. CCCGCACCGGTCGCGCTCGCCGAAGATACGCA 30435 29 96.6 32 ............................G TGAGGATTACGGGGCCGTGGAATTTGTGGCAT 30496 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 169 29 98.9 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GATGCTGACCTCTTCTTATGGAGCGAGCTCGAAACAGTTGCAGCAGGAGTGAATTGGGATTCGAAAGAGGCTAGCTGGGCATGATGGTATTGGTTATTACCGCCTGTCCTGCTGGCTTGCGCGGCGACTTAACGAAATGGGTTATGGAAATTTCCCCTGGAGTTTTTGTTGGTCAGCCAACGGCGAGAATTCGTGATATCTTATGGGATCGCACTGTTGAATTGTGTAAAGACGGTCGAGCTTTGCTTGTTTATTCGACGGACAGTGAACAAGGAATGGAGTTTAAAACTCATCGGCATGATTGGGTGCCGACAGATTTTGATGGCTTGTCTTTGATGATTCGTCCTGCGTCCGCGGGAAAACGAGATCGCTTTGGAAACGGTAGACGTAGTGAGTGGGCTAAAGCTCGTTTTAAGAAGCAACGCCGCTGAGGTGGAAGCTTCTCGACGGAGTTGGATCTAGAATAGGCCGTGCACTGCTGTTGTTGCTGGTTGCGAAGT # Right flank : CCTTGCCAACCGCCTTATGAAAAGAAACCTTGGGAACTTCCCACATGCGCGGCGATAATGGTGCTCGGTCTACAACGCCGCCAACGCCTCGCCCACGCGCTTGCCGGAGTGGATGCAGCCGCCCAGGAACGTGCCTTCCAGCGCGTTCTTGCCATGCATGCCACCACCGCCGAAGCCGGCGGCCTCGCCGCAGGCGTAGAGCCCCTCGAGCACGGTGCCGTCGGAGTGGAGGCAGCGGCCGGAAAGGTCGGTTTCGATGCCGCCCAGCGTCTTGCGGGTGAGGATTTTCAGGCGCACGGCGATGAGCGGGCCCTTGGATTCGTCGAGCAGCCGGTGCGGTGGGGCGGTGCGCACAATCTTATCGCCCAAGAATGCGCGCGCGATGCGGATGTAGTTGACCTGCGCGTCTTTGCTAAACGGGTTGTCCAGCTGCGAGTCGCGGTCCTCGATGAGGGTGCGCAGTGCGTCGAGTTCAATGCGTTCGTCGCCGGCGACCTCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //