Array 1 2250077-2249583 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048103.1 Kroppenstedtia eburnea strain DSM 45196 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2250076 30 100.0 38 .............................. CAGCCAGGTACTTCTCCCCTCCGGTGGTAGTTTCCAGC 2250008 30 100.0 36 .............................. GTCCATCCATCGGAATCTCTTCATATCCCACAAGAT 2249942 30 100.0 35 .............................. TCGACCTCCCCGGACTAGATGAAGAGTACCATCTA 2249877 30 100.0 37 .............................. TCTGGTTCACCCCATCCCATTTCCAACCCGATTGAAA 2249810 30 100.0 36 .............................. TGCGAATGCCCCACAGATACGAAAAGGATGCTGGCT 2249744 30 90.0 36 .....GT..............G........ ACCGGCGATGAAGTGTATCAGATTTGGGCGGAGGCC 2249678 30 93.3 36 .....G...........G............ AAGCAGTATTTGCTCGGCTCAAACATGACCACCACG 2249612 30 83.3 0 ....TG...........G..........CG | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 95.8 36 GTTTATAACGTACCTATAAGGAATTGAAAC # Left flank : TTCAAGCGATCGGCATCGAGGATTTAGCGGAGATCGGATCTGGGATCGAGTCTTGAAAAGCCGATAACCATGAGGGTAAAATGGGTTTAGAACGTACCTATGAGGAATTGAAACACTATTTTGAAAAGTCTTGGCAGGACAGTGCGGGCGTGTTGTCTTGAATCGTGGAGTACCGTTTAGAACGTACCTATAAGGAATTGAACGCCTTGTTTCCTGATCGACCGCATGAACCATAAAGGCTTCCACTACATCGAAATTAACAAAGATCCCCACCTGTTCAACCTGCTGATCTGATCCCGGAATGGCGGGGGTATACCAGAATCATCCAACAAAAAGTCGTCGACCCCCGGTAATGTAAAAACCCCGGGGGATCGACGACATTTGTTATGTGGCGATTGAGATTGATCTATCAAAGGTTCAGACGATCGGCATCGAGGATCCACGGGAAATCGGATCTGGGATCGAGTCTTGAAAAGCCGATAACCATGAGGGTAAAGTGG # Right flank : CCTTGCATCCTGATTGATTGGATAAAGCGAAAAGGCTTCCACTACATCGAAATCAACAAGGATCCCTACCTGTTGAACCTGTTGATCTGATCCCGGAATCGGGGGGATCTGCCGGAATCACCCAACAAAAAGTCGTCGACCCCCGGTCGTGCAAAAATCCCTGGGGATCGACGACTTTGTTATGTGGCGATTGAGGTTGATCTATCAAGGGTTCAAGCGATCGGCATCGAGGATTTAGCGGAGATCGGATCTGGGATCGAGTCTTGAAAAGCCGATAACCATGAGGGTAAAATGGGTTTATAACGTACCTATAAGGAATTGAAACTTCCTCCAATTCTCGATTGGTATAGTATCGGAGGGCTTGTTTATAACGTACCTATAAGGAATTGAAACTGTTCCTCCAGCAACCTTTCAGCAGCCAGTTTCAGCGTGTTTAGAACGTACCTATGAGGAATTGAAACCCCACGATGCCCCACGTTTTGCCGATTCCATATTCTTGA # Questionable array : NO Score: 9.05 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAACGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 2252263-2251562 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048103.1 Kroppenstedtia eburnea strain DSM 45196 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2252262 30 100.0 41 .............................. CATTTCGGAAGGCAAGTAGTCCCTCGGAGATGATGAGCAGC 2252191 30 100.0 35 .............................. TTAAAAGAAGAACGACTTATAAGAGCAATTGAACC 2252126 30 100.0 37 .............................. TCCCATCCACTTGAATCTCGCACAGGTACACATCCTG 2252059 30 100.0 37 .............................. AACCGTACCCAGGAAAATCGTGACAGACTCTAAAGCC 2251992 30 100.0 35 .............................. CCGAATACACCGGGGCCAACGTCAAAGACACCACC 2251927 30 96.7 38 .................A............ CGCAAAACGGAACAGAGGGATCAGTGGGCTTGGGTCGG 2251859 30 96.7 38 .................A............ TATCGTTGTTGACAAGAACTTCCCGAAAAACAAAATCG 2251791 30 96.7 36 .................A............ ATCCAACCTTCTTCCAAACGGAAAACCCCCTTACAA 2251725 30 96.7 36 .................A............ TCCCCTTTGCCAATGCCTCCAACAGACCTTTCCCAG 2251659 30 93.3 38 .....T...........A............ ACTACATGCTGAGTCACAATCCCGACCGCCGCGTCTGC 2251591 30 76.7 0 ......GG.T...T...A..........CG | ========== ====== ====== ====== ============================== ========================================= ================== 11 30 96.1 37 GTTTAGAACGTACCTATGAGGAATTGAAAC # Left flank : GCAGGAGATCAAGGAGCGCTCCCTGATTCACGAGGGATTGAAGCATTACTTCTCCGTTAACTTCCCCCAACGGGCCGGCGCCCTCCGGGAATTCCTCGATGAAGTGCTCGGCCCCGATGACGACATCACCCGCTTTGAATACACCAAGAAAAACAGCAAAGAAAACGGCCCCGCCCTCGTCGGAATCGAATTGAAACGAAAAGAGGACTACGCCCCCCTGATCGACCGCATGAACCGCAAAGGCTTCCACTACATCGAAATCAACAAGGATCCCCACCTGTTCAACCTGCTGATCTGATTCCGGAATCGGGGGAAATTTGCCGGAGTCCAACAAAAGTCGTCGACCCCCGATCATGCAAAAACCCCGGGGGATCGACGACATTTGTTATTTGGGATCAGGGTTGATCTATCAAGGGTTCAGGCGATCGGCATCGAGGATTTAGCGGAGATCGGATCTGGGATCGGGTCTTGAAAAGCCGATAACCATGTGGGTAAAATGG # Right flank : GCTTTCACTACATCAGATCAATTAATCCCCACCTGTTCAACTTACTGATCCGATCCCGGAATCGGGGGAGATCTGCCGGAATCATCCAACAAAAAGTCGTCGACCCCCGGTAATGTAGAAACCCTGGGGGATCGACGACATTTGTTATGTGGCGATTGGGTTTGATCTATCAAGGGTTCAGCGATCGGCATCAAGGATCCAGCGGAAATCGGATCGGGATCAGGTCTTGAAAAGCCGATAACCGTGTGGGTAAAATGGGTTTAGAGCGTACCTATGAGGAATTGAAACTACAATACGCCGAGCAACGCCATGGTCCGGTGGGTGAACGCCAAGACCATCCAAGTTTAGAGTGTACCTATGAGGAATTGAAACATTTGTCCATCCCAGTCTTCGAGCCTTCGGCGTACTTCATGTTTATAACGTACCTATAAGGAATTGAAACTCGCTGGTGATCGTCCTCTGAACCTCGACGTATTTCGTTTATAACGTACCTATAAGGA # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTAGAACGTACCTATAAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 2383171-2383527 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048103.1 Kroppenstedtia eburnea strain DSM 45196 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 2383171 29 100.0 36 ............................. TGGGCATTTGAAAAGGTGAAACCGGCCACATCGCAA 2383236 29 100.0 35 ............................. GTGGTTAGGTGGGAGTGCGGGTTATTCCTGCATAT 2383300 27 93.1 39 ..............--............. TAGGCAATGTTTCGAACACGTCCGGCCACTATATGCTCT 2383366 29 100.0 38 ............................. ACAGCACTGCGATCAATACTGCTGGCCTCATCCTGAAG 2383433 29 100.0 37 ............................. CAGCCGTTTGAATCGGCGGTCGTGACCCTAACCTATC 2383499 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 6 29 98.9 37 GTTTTAGATGAACGTAGTGGGATATAAAG # Left flank : GAGCGGGAACGGGGCTGGGTGGAACGAAAGATCAAGGAAGCGTGGAGACAGCCGGATGCAGACAAAGCCCATCGCGCTTTAAAGCGGCTGGCCAACCAGTTGGATGAGGTGCATCCGGGGGCCGCGGCCAGCCTTCGGGAAGGCATGGAAGAGACGTTGACTGTCATCCGTCTGGGTTTGTCCGAGCTTCTGCAAACAACCCTGAGATCAACCAACGCGATTGAATCCGCTTTTAAGACCGTGCGGGACGTATCCCGGAATGTGAAGCGCTGGCGTAACGGTCAACAGGTGCTACGCTGGTCTGCCGCCGGTTTATTGGAAGCGGAGACCCGTTTTCGGAGGATCAAGGGGTACCGTCAACTTCCTCTGTTAAAACAGGCACTGGAACAACACATCGACAGCGAACCAAAGGAAAATAAGCCCATCACCGCGTAAAACAGCGAAAAAGGCCGTCACGAAAATCTACGACGAGTGGGACAATCCCGATGCCGGGAAGATCG # Right flank : GTTGGATCACGGAAGTAAGGAGCCGTGATATAGCGCCCCTTTAAAATGCAACATCCGGTTTACTGAGACATCCAGCACCCCATAATGGTAGAAAAGCCAATGATGGAGGGATGAAGATGAAGCGTCGTCAATGGAGCAGAAAAAGTAGCAATTGTGCTGGAAGGTTTGAAACAGAATCGATCGATCTCAGAAGTTTGCCGGGATCATCAAATCTCGCAGGCGCTTTACTACCAATGGAGGGATGCGTTTTTAGATGGAGTAAAGGCAGGACTTCGTCCCAAGAGGTAGGAATATATGGGGTCGGAGAAAAGAATTTAGAAAATAGGGGTGGTTAATTATGGGAGGCATTATTTGGAAATATGCTGAAGGTCCTGTTAACGAGAAGGCGGTAACGCAAACCGAGGAGCTTTTGGGTGTCAGGTTGCCAGATGACTTTAAAAAAATAGCAGTGGAAAATGACTGTGGGATACCACATCCAGGTCGGTATGATCTCAACGGTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 4 2404860-2405499 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048103.1 Kroppenstedtia eburnea strain DSM 45196 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 2404860 29 100.0 38 ............................. AAGGGTGGATCAGTCTTCACCGGCAATTACAGGATCAC 2404927 29 100.0 36 ............................. GCAGGATGAGCTTGTCAAGAAGATCGCGGATGAGTG 2404992 29 100.0 38 ............................. TTCCATCCATTCCGGCAGGTGTTCCCGACTCTTGATCC 2405059 29 100.0 37 ............................. CCCAACCGAGTCCGTTCGGATACATTCCCTTTCAGTT 2405125 29 100.0 46 ............................. ACGTGACTACCGGTGCAGTTGGTGCGACTCCGCTTTTACGGTTTTA 2405200 29 100.0 38 ............................. AGTGTGAACAGCGTTCCAAAAATTGTGATGACAATCGT 2405267 29 100.0 38 ............................. TCTGTTCAGGATTTTGCTTACCGATGTCCTGTACTTGC 2405334 29 100.0 36 ............................. AATCCCCGTTTAGACAATTAAGGACATAGCTTTTCG 2405399 29 100.0 43 ............................. ATGCCACGGAACCGGCGAATACAACCCGACGGGGCAGTATCTG 2405471 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================== ================== 10 29 100.0 39 CTTTATATCCCACTACGTTCATCTAAAAC # Left flank : ATCATACGTTCCAGCGCAGCATCGGTCAGCAGAGAAGGATCTTGAAACACTTGATACACTTCCAAGTGAAGTTCCTCTCCCTCCACAGAACGAACCCGGGGCTTTTCCACCCGAACTTTTCGTCCTCCCAAAACAACAGACCCTTGTTCCACCCCGTGCCGAACCGCTTTTCGATTCGGGTTGTGTTTTCCCTTGGGCCCCGCCAGCTGGGTGACCTCCTCTTGCATCATGGCTTGGAACACCTGGAGCCCAGTTTGTACAGCCAATGCCAGCAATCCCTCTTTCGCCGATTCCATGATCTGCGTCAGCGAAAGCTGAATCGTATCGTTCTGGAACTTTCCTTCTCTTTCGTGTAAGCTTTTCATAGTGGCGGTTTCTCCTTCTTGGTTTGTCCACCACCGTTATACCAAACGGTTTAGGAGACCGCCACTTTCAATTTCCACGATTTTTGGGACATAGCCCTAGATGAAGTCGGCAGTAATACCCGCATATCCTTTGTA # Right flank : CCCCTTAAATCAAAAAGCAATAATCCCAGTCATGACGGGCATTTTCGCTAACTCGTTCCTGGCTTGGAACTCACGATTTGCAGTGAAGTGAAAGTCCTTTTTCTCAAAGCCTGTTGAAGTCCGCTACTATTCCTTATTTGATAAGGGATTTGGCGATTTTCATCTTGTCAGGGGTTTACTGCAGTTTGTCTTTACAAAAACAGATCGTCAAATCCCTTCTCTCGACCGAATACTGTCTTTTTCATGTGATTTTGATTGTTTACTTGATACAGGTAAATAGAGTCATGTTGCGGATGAATAATGTTGTCCAACTCGTGCATGCACTGAGTCAGTTTCCCTTTCCCGATCTGTCCTTCAAATACGGAGTTCTGAGTCCATGTTAAATATTCTCTTAGCTTTTTGCAAACCTTGTACACCCGTTTCTCACCCACATCATACGTGATGATCACATACACGCTTCCATCCTCCTCGCCATCCGGCTCCGCTTCTATATCCCTTCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATCCCACTACGTTCATCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //