Array 1 326590-322830 **** Predicted by CRISPRDetect 2.4 *** >NZ_CXON01000002.1 Limnohabitans sp. 2KL-3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 326589 28 100.0 32 ............................ ACCAGGCGCTACATCCAGTCGCTGATTACCGA 326529 28 100.0 31 ............................ ATTCAAATGGTTTGGCAAGAAGGTAGATGCC 326470 28 100.0 32 ............................ AGTATGCGTTGTACTCATTCCAAGACTGGCCA 326410 28 100.0 32 ............................ ATACTCGCCCGGCACAACTCAAACCGTCATTG 326350 28 100.0 32 ............................ TTGCGAAGATCATCCGCACCGCCCTTGCTATG 326290 28 100.0 33 ............................ GGAATGCGCGGAATGAAGGTCACGATGATGGAA 326229 28 100.0 33 ............................ TTGTTGGTTGCCTTATCACCGCTATCCATTGCT 326168 28 100.0 33 ............................ GACTCACACAAGCCATCTTCACCGGCCTGCCAT 326107 28 100.0 32 ............................ TGAAACGATCTTCCAAGCCGAGGCCATCACAG 326047 28 100.0 32 ............................ ATTTGAATGGGTTGAGTGTCATTGCGGAATCT 325987 28 100.0 32 ............................ ATCGTCTCTAGTCTCTACGACCGAGTTAAACA 325927 28 100.0 32 ............................ AACAGCCAGATCTACCAACAGCTCAAGTACAT 325867 28 100.0 32 ............................ ATTGTGGTTTTGATCGAACGCCTTGATTCGCT 325807 28 100.0 32 ............................ ACTGAAAATCGCCTGCGTCAATCGGGCACCAA 325747 28 100.0 32 ............................ GCTGATCCCCGTGATGCACTCGCACAAGTCAT 325687 28 100.0 32 ............................ GTTCATATTCGGCACAAGCTCCTGTCCATTTA 325627 28 100.0 32 ............................ TGAAGATCAAAGGAGAACTCACATGCTGATTG 325567 28 100.0 32 ............................ TACATGAACGCCGACGCCATCGTCATCCACCC 325507 28 100.0 32 ............................ GGCGCAAGACCGCCGGGTCAGGCACGCTGGAC 325447 28 100.0 32 ............................ TTTGTTTGCCGTGTTTCCAGTCGCAGTGGGTA 325387 28 100.0 32 ............................ AGGGCAAATCCGGGCGCACTGGTGATCGTTCG 325327 28 100.0 32 ............................ ACAATGCACCTCGACGCAGATCGTCGCGCACC 325267 28 100.0 32 ............................ AAAGAATTGGCTGAACTGCTTGGCGTTACCCA 325207 28 100.0 32 ............................ ACCGGCACCGCATGACACCCCGCCTGCCTGAG 325147 28 100.0 32 ............................ ACCAAGGCCTTGATGTCCACTTGCATGTAAGC 325087 28 100.0 33 ............................ CAGGCAGTGAAGCCACACTGTCATTGGCGCGGC 325026 28 100.0 32 ............................ TTTGCTTCAGCCTTTGCCTTATCAGCTTGTTC 324966 28 100.0 32 ............................ AGCTTCAGCCGTAGAGGGTGAATGCTGGATTA 324906 28 100.0 32 ............................ GCAAATGACGGTCGTGGCGGGAGCATCACAAG 324846 28 96.4 32 ............C............... AACAAGCACCCTGCCTTCGTCGCTTGCACTGA 324786 28 100.0 32 ............................ AACCCATGTGCGCTGTGCTGGCCGTTCATACA 324726 28 100.0 32 ............................ CATGTCATCGCTTGAAAGCTCATTGGAAATCC 324666 28 100.0 32 ............................ CGAAGAAATGGTCGTCTTCAGGTAATCGCAAA 324606 28 100.0 33 ............................ AAGGAGAAATCATGAAAGTCAAAGTTACAGCTT 324545 28 100.0 33 ............................ AATGGTTGATCGGGGTCGTTAACGTCGATCAGG 324484 28 100.0 33 ............................ ATCGAAAGCACTGGCATTGTCGAATCTTTCAAC 324423 28 100.0 32 ............................ CGAAAGGGAGGTGATTCCGGCACCGGAACGCA 324363 28 100.0 33 ............................ AATCCATGCCCGTCACCAGTGTGCAAAACGACC 324302 28 100.0 33 ............................ CTACATTGCGGCCGCCATTGCCGTGTACCAGAT 324241 28 100.0 32 ............................ AAACCTCACGCGCCATTTCAATTACTGTTTTC 324181 28 100.0 32 ............................ AAGAAGACTGGAAAAATCCGCGCTTGGTGGCT 324121 28 100.0 33 ............................ CGGAGCCTGATCCACAAACAACATTTCAACCAA 324060 28 100.0 32 ............................ AGCCAGCCGAGGGCTTGTTGCTCGAGTGGGTC 324000 28 100.0 32 ............................ AAAACCGCCAAAGTAGTACTGGGTGAAGTTGG 323940 28 100.0 32 ............................ GTCAACAATAGAGAGATAAAACCAACTTGACG 323880 28 100.0 34 ............................ AAAACGCGCTCGCGCCATGTCTGTTCGTACTCAG 323818 28 100.0 32 ............................ AGCTTTACACAGTCCGACAAATGGACTGTGAA 323758 28 100.0 32 ............................ GGCGGAAAGGGCGCGCTGAATACGAGAAACAG 323698 28 100.0 32 ............................ TCAACCGGCTCTGCATCGCCGGTTTTCACAAA 323638 28 100.0 32 ............................ TGCACTCACACCAGCGCAGCCGGTGGGCCAGA 323578 28 100.0 32 ............................ ATGCAGCAAAGCGCCTTCGTTGCCGCCGATTT 323518 28 100.0 32 ............................ AATATTTCTTGCTTGTGCTGCGCGGTTACACC 323458 28 100.0 32 ............................ AAGATCAACATGAAGCATCTTTGCAGCTTCAT 323398 28 96.4 33 ................T........... ACAAGTCCATCGCACTCTTTTGCGTTTTCTTCG 323337 28 100.0 32 ............................ AGACGCTTGACGATGTTTCTAAAGCCGTCCGG 323277 28 100.0 32 ............................ AATCTGGAAGGTGGTGCAGCGTGAACAAGCCC 323217 28 96.4 32 .................T.......... AAGTTGGCAGCGCTGAAAAGGGATTGTTGAGC 323157 28 100.0 32 ............................ ATCGAAGAACGCAAGCTGGACCTTGAGGCGGC 323097 28 100.0 32 ............................ TGCTTCGGCCATGGTGTTGGCCAGGCGTTCTT 323037 28 100.0 32 ............................ GACAAGTTGAACAGGCCCAGCGTGGTGACCAC 322977 28 96.4 32 .................T.......... TCTTATGTGAAAGTGCAGGTCCACGCGGCAGA 322917 28 96.4 32 ....................T....... GTCTCGCTCCACCGGCTTTCGCCGATGTCGCC 322857 28 82.1 0 .......A...A.C....C.....A... | ========== ====== ====== ====== ============================ ================================== ================== 63 28 99.4 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : TGTCGCTGCACACACTGCTGACCACAGATTGGCTGACCGGCATGCGCGACCATGTGGCGTGTGGCGCTGTGTTGGCGGTGCCTACCAATGCCCTGCATCGCGTGGTCAGTCGTGTGCAAGCCAAAAGCAGCCCCGAGCGCTTGCGCCGACGCCAAATGCGTAGGCATGGCCTGACGGCAGCGCAAGCACAGGAGCGCATCCCCGACAGCGCTGCAGAAATGCTGAACTTGCCCTTTTTGACCCTGCGCAGCCAAAGCACGGGTCAAACTTTTCGGCTGTTCATTCGCTTGGGTCCGGAACAGACCACAGCGGTGCCAGGCGAGTTTGGTGCGTATGGTTTGAGCCCGCAGACCACAGTGCCTTGGTTCTGACCCTTTTTTTCGGCCCCGCTGCAAGTCCATATAAATCAAGGACTTACAGTGGGGTCGAAAATTTGGGTGCTGAACCATTTTTTATCTAAAACCTTAGGCCTGACAATGGGTTGGGGATAATTGAGTGCT # Right flank : ATGCTCCTAAAGCATGCGCCCAGACCCCCAGCCCTGTCTCCGGACTGTCACGTAAATGCCCCCGCTCCCCCCGGTGTTTGGTGCAAAATTGTCTTTTTGATTTCAGGCAGAGCACACCATGCAACCTTTCCATTTGGCTTTCCCCGTCACTTCTTTGGCCAAGGCCAGAGCGTTTTATGGTGACCTTTTGGGTTGCCCCGAAGGCCGCTCCAGTGAGCACTGGATTGACTTCAATTTTTATGGTCACCAAATCGTTGCCCACTTGAGTCCTTCCGAGGCTGGTCACCACAACACCAGCGCGGTCGATGGCGACAACGTGCCTGTGCGGCACTTTGGTTTGGTCATGGAGATGGGCCAGTGGGAAGCCATGGCAGACAAGCTCAAAAAAGCGGGCACTTCATTTGTCATTGAGCCGCACATTCGCTTCAAGGGCCAAGTGGGTGAACAGGCCACCATGTTCTTTTTGGACCCTTGCGGCAATGCGGTGGAGTTCAAGGCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //