Array 1 134157-131899 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGRR01000022.1 Clostridium baratii strain XCM contig000022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 134156 30 100.0 37 .............................. GGGTATTGGTCTTTATATAATGGTGAAGGCGAATTAA 134089 30 100.0 35 .............................. TATAATATACTATAAAGATAATTAAAAGGTGGTAA 134024 30 100.0 35 .............................. GATTCTACTTTGTTATCATCATATTGTTCTATTTG 133959 30 100.0 37 .............................. ATGCTTAAATATGTGTAAGGAAAATTGTACAACCTAC 133892 30 100.0 37 .............................. ATAACTCCGTTCGACTATATAAAAGCTAATGATTTAG 133825 30 100.0 34 .............................. AAATAAAGTTTTGAACAACTACAACTTTTAGTAT 133761 30 100.0 35 .............................. CTAGAAGATATAATATCTAATATAGATTAAAAGGA 133696 30 100.0 36 .............................. CCATTTCCGAATATGGTTAATGCAGATGCAGTGTTA 133630 30 100.0 36 .............................. TCTAGTGAATTGTATTCTTTTAAATATAATTTTCTT 133564 30 100.0 35 .............................. TATCTTTTAGTTGTTCCATTTTTTAATTTTTTTAC 133499 30 100.0 36 .............................. CTGGGAAAAATGTAGACATTATTCCTAACGTAAATA 133433 30 100.0 34 .............................. AGCAAGTGACGGAAGTACAAAGTATACGTCTGAT 133369 30 100.0 36 .............................. AATGACTTACCATCTATACTTAAAGACTTATCTATA 133303 30 100.0 34 .............................. AATACCAACGAATACGAGTAAAACGACTAAATAA 133239 30 100.0 35 .............................. AGTATAAGACCTAGTTATTACAATGATACTTTAAT 133174 30 100.0 37 .............................. ATAAAAAGGTACTTGGTATTCTAGCAGATAAAGAAAT 133107 30 100.0 36 .............................. CCCCTAATCATGAATTTGAATAACCTCAAGCGTTTC 133041 30 100.0 35 .............................. TTTACAGAACTATGTGCAAAATATTGATTGTTTTC 132976 30 100.0 36 .............................. ATAAACAATACTAATACAATTACACATAGTTTATTA 132910 30 100.0 36 .............................. TGCCAAAAAGTAAAAAACTCTAATCAATCAGCGAAA 132844 30 100.0 34 .............................. GAACTTAAAAAGCATATATTCTACGTTTTAAATA 132780 30 100.0 34 .............................. ACATATGGGGCTATGTGTATAGGTAGCATGGGAT 132716 30 100.0 37 .............................. ATTGAAGATAAAAATAAATTATTAAAAGGTATGATTA 132649 30 100.0 36 .............................. TATCATAAGGTATGCAGAAATAATGGCAAGATTAGA 132583 30 100.0 36 .............................. CTGATTTGTTTAGTTCTGTTAGTGGATTGTTTGAAA 132517 30 100.0 35 .............................. TCAAGTGGTGATTACGTGTCAAATGGTTCAAGTTC 132452 30 100.0 34 .............................. ATTAGATAATTTAGTCGAGGTCATAGACACTCCG 132388 30 100.0 35 .............................. ACAGAAAGCCAAGTAATTAACCTAATAGTTACTAA 132323 30 100.0 37 .............................. CAATATGAGAAAAATGTGAAATGGGAGAGTGAATTAA 132256 30 100.0 36 .............................. TATTATTTATCATTCCTATGTTTGCGAACTCGTCCA 132190 30 100.0 37 .............................. GAAATTAAATACGCTTATACTTGGAAACCATTTAGCC 132123 30 100.0 35 .............................. GTAAGTTCAGCCACCTTCTTCAATCCACTTTCTTC 132058 30 100.0 36 .............................. CTATAATCTTGCTCTGTTAACATTAGAAGTATGAAT 131992 30 100.0 34 .............................. GATGGTATGGGAGTAACTCCCGTATATAACTTAG 131928 30 86.7 0 .........G.....AG............A | ========== ====== ====== ====== ============================== ===================================== ================== 35 30 99.6 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TTAAGCCATTTAGTTTAAAGGAGGGATATTAATGAGTAACAAAATTAATTATAATTATGCCTTTTTATTTTATGATGTAAAAGAAGAGAGAGTTAATAAAGTATTTAAAGTATGTAAAAAATATCTTTCACACTTTCAAAAGTCCGTTTTTAGAGGTGAAATTACACCATCTAAATTAATATCCCTTAGAAAAGATTTAAATAAAGTAATAAATAAAAATGAGGATTATGTTTGTATTATAAAACTTTTAAATGATAATGTATTTGGAGAAGAGATGCTTGGAATTAAGCAAATTACAAATGGTGAAAGTTTAATTATATAGAATTTTACCAATGATAAAATTCTAGTAACTATACGAAAGGGCAGTGTTTATAAGGGTTAGCTTAGTATTTGAAAAATAATTTTAAAATTCATTAAGTCTTTGGTAAAATATTAATAGAAGTAAAGAAATATGGGGTTCTTATACGTTTTAGTAATTTAGGAATCCCTTGTTTTCAATG # Right flank : CACAGAGATTATAAGAAAGGCAACTAAAAAAGAAGAGGAATAAGACCTCTTCTTATAATTTAAATTAACTTTGAGTATATGTACCTAATTTAGCATCGTATTCTATATAAGTATTTGAACCATCTTTATTAACAACTGTAAATTCAGCCTTTAATAACTTAGCATCATCTTTTTTACCGGATTTAGGTCCAAAACATTCTTCAAGTGTACTTGTATCCCCAGGGCGTAAAGTATCATATGTTGATAAATATGTTTTTTCTCCATTTACGTCATATGTATATTCTATACCTTTTATATTTTGGTTAGAATTATTTTTAAATTTAGTTTCCATATATATGTTTCCTATTGAGTCAGGCTTTCTTACTTTGAAATCAACAAGTTGTATATCTTTTATAGTTACCTTTGGAGTTTCTTTCTTAGTATCATCCTGGTCTTGCTGATCAGTTTGTTGCTCTGATTGTTTTTGATTATTATTACTTGAAGTTTGATTTGTATTTGAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 144663-143325 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGRR01000022.1 Clostridium baratii strain XCM contig000022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 144662 30 100.0 35 .............................. ACCCATAGGTGACCGTCTTCTTCTATTGTAAATAT 144597 30 100.0 35 .............................. ATCTAAGATTATTGATGATTTTTTAAAAAAAGGAT 144532 30 100.0 36 .............................. TATGATGAAGACGGTATATTAATTGACGATACTTTC 144466 30 100.0 34 .............................. AATTAAAGGTAAGAATAGAATATTAATTGCTGTT 144402 30 100.0 35 .............................. CTCCATTTATATTTCTATTTTATTTATTTTTATTC 144337 30 100.0 35 .............................. TTCTCCTACATATGCTTGATAGACATATCTTCAAA 144272 30 100.0 36 .............................. CAGTCAAATTGAACTGTTAAAAGATAAATATGATGT 144206 30 100.0 35 .............................. ATATATATAAATAAATACTAACTAGGTGTTATTAA 144141 30 100.0 36 .............................. AATCCATCCATTTTTTGTACAGCTTGTTCAATTAAA 144075 30 100.0 35 .............................. TTTAATAGTGAAGATAAAATAAACAATTATATAAT 144010 30 100.0 36 .............................. AAGTATGTGGTTATGCCATTTATATTGACGGTGAAC 143944 30 100.0 34 .............................. TGGTTTTTGGATATGGAACATGAAGTAACTGGTG 143880 30 100.0 36 .............................. TGCTAGGAATGTAATTACTACGTTTATTCTTAGTAA 143814 30 100.0 35 .............................. GTATACTATGATTACTACATCGATTCAGAAGGCTA 143749 30 100.0 36 .............................. AGAAATATAGTCAAAGAAGAGGTTGAATGTAAATTA 143683 30 100.0 35 .............................. TCTAGTGAATTGTATTCTTTTAAATATAATTTTCT 143618 30 100.0 37 .............................. TCCTCATTATATAAAGGTTTAATTTTACCCTTATGAG 143551 30 100.0 34 .............................. TTTGTTATTCTAGTGTTTTCTTCTCTTTTAACAT 143487 30 100.0 36 .............................. TATCTTTCTAGTCTAGATATGGTAGGTTGACTAACT 143421 30 100.0 37 .............................. ACCAATCAGCATTTTATGTTTTTTACCAAATCTGCAA 143354 30 76.7 0 ........AC..T..GA.......CC.... | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 98.9 35 GATTAACATTAACATAGGATGTATTTAAAT # Left flank : AAAAGAAAAAAACTCACAAGCCTTAATATAACAGTGCTTGTGAGTCTTTGGTAGTCCCTAGGGGAATCGAACCCCTAATTCCACCGTGAGAGGGTGGCGTCCTAACCGTTTGACCAAGGAACCATGAACAATATTATTATAGCACTTTAATATGCGAAAGTTAAATTTGGTTTATTGCCATATTACTTTAAATAGTGGTGTATTTTTCTAAATTTATTACAAAACATAGATTTAACTTCACTTTGCTTTAGTATTATTTGGATAGGTGATAATGTTTACTTTGAGTTTATAATTATTTAAAATTTTGTTGTGATTAAGTATGACTTTTACCAATGCTAACTTTTATTATAATCTCTTAAAGCATTGAGATATAAGGAATTAAAGAATAATTTGGGAATTACTTTAAAATTAGCTATATCATTGGTAAAATATTAGTATAAATTAATAAAATAGATGATTTAGAGAGTTTTGAACAATTAAGAAAAGTAGTATTTTCAATG # Right flank : AATAAAGATAATAAAATATATTAATGCAAAGTTATATTATGAGTTAAATTAGGAGGAGTGGTATGAAAAAGATAAATACAAAAAAGATAAATTTGGGTTTAATTATAATTTTCACAACGATATTCCTAAGAAGATTTGTTCAATTACCTGATTTTATTTATGGTTTAGGTGTTGGAATTAGTTCTACACTCACAGCAATTTGGATTTATGAATTCAGAAATATGAATAAAATTCTAGAAACTAACAAATAGTTTTTAGAGTTTAGGATTATAAGAATAACATCAATGTTGAATAGAATATTATTATCGTAAATAAAGTCAAATTAACGATTATTATACCATATTTTATAAAATATGGTATAATATTATATAAGGAGGGGTGATTTTGCAGATTTTTGAATTACAAAATAAAATTTATTTATCAAAGGATGTAAAGCAAGAGGAAGTTTCAAAAGAAATAAGTTCATTAATAGATATAACATTAGGAAGAAATGAAAAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //