Array 1 46887-45084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOY010000018.1 Dorea sp. NSJ-36 YM-YCFA-11_ctg018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================= ================== 46886 36 100.0 30 .................................... GACGAGCGGAAGTAATCTCCCGCTCGTCAG 46820 36 100.0 30 .................................... GGCGCACAAATAGCATTGGATGTACTGATG 46754 36 100.0 29 .................................... CAATTCATCAATACCAAGTGTATAGGTCT 46689 36 100.0 30 .................................... ACTAAAATGAAAGTAACGAAAAAAATTACA 46623 36 100.0 30 .................................... GTTAGCTAAAGCAATCTTTTTCCGATATGC 46557 36 100.0 30 .................................... CATGGCAATACATGCCACGATTGGAAATCC 46491 36 100.0 30 .................................... AATCTGCAATGCTGATAGGTGTTATCCCAT 46425 36 100.0 30 .................................... TATCCAAACGAAGGAGTTGCGTATGTTTAA 46359 36 100.0 30 .................................... CGGTCCGCTATAATCTCTTCTGCCGCGTCC 46293 36 100.0 29 .................................... TACTTGATGCAGACGGACATGAACTTGCT 46228 36 100.0 29 .................................... TGAAAATGTTTAAAGAAGAGTACGGGGAA 46163 36 100.0 30 .................................... GTGGTGGTCGGTATCCACAGGCTTTTGTGA 46097 36 100.0 30 .................................... AGTACAATGCCAAGAAAAAGCAGCGATAGC 46031 36 100.0 29 .................................... GGTATAATGTTATCCAATTGTGAACAACT 45966 36 100.0 30 .................................... GATTCAGACACATGGTTCTAATTTTGCTAC 45900 36 100.0 30 .................................... AATTAGTGCATTAGACTTGTACCCGTCTGG 45834 36 100.0 30 .................................... CCAGACATCACGAGCGACAGCAGAGTCATG 45768 36 100.0 29 .................................... TACTTGATGCAGACGGACATGAACTTGCT 45703 36 100.0 30 .................................... TTGACTGATCTCTTTTTACGCCTGCCGTAT 45637 36 100.0 30 .................................... GCCTTTTGGTGGTTACAAACCTAAAAACAA 45571 36 97.2 30 ....................T............... TTGACTGATCTCTTTTTACGCCTGCCGTAT 45505 36 97.2 30 ....................T............... TTTGAGATCCCAACACGTGCCAGCGCGTCA 45439 36 100.0 29 .................................... CTGCAGTCACGAAATGAGCGTATGTTTCT 45374 36 100.0 30 .................................... TACTGGTTCTGGAATGGCACACAATAACAT 45308 36 97.2 30 .......................G............ ACAGATTCGACAGTTACAGTATCCACTGGT 45242 36 91.7 87 ......A.............T..........A.... TGATAAGTAATCGGTTATAAAAAAAGGAACTTGAAATTGATGTGAAAACATATAAACTATAGCATACATTAAGCTCCTCCACATTAA 45119 36 75.0 0 ......A............GAA..C..C.T.A...G | ========== ====== ====== ====== ==================================== ======================================================================================= ================== 27 36 98.5 32 GTTTGAGAATGATGTAAAAACGTATGGTACTGAAAC # Left flank : AAAAAGATAGTGAATAAATTATATGAGGAAATGCAACAAGTTGCCTATTCTGAAAAGTTGTATGTAAAAACGCAAGAGATAGCACAAAGTATACAAAAATATATTTTAGAATTAGAACAGGAAACAGATTATATACTTACATTTACAGAAGATGTTGACTGGATGGCAATATTTAAAGCATTACAGGTACAGCATGAAATAATAGAGGAAGATTATTTTGAAAAACTGATTCGTTATATTAAAGTTGCAGCGGTAGTCATGAAGTATAAGATTTTTGTATTTGTAAATCTCCGGAGCTATTTGTCAGATTTGCAAATGCAAAAACTTATCCAAGAAGCAATTCATCAGGAAGTAAAACTGATATTTGTGGAAAATTGTGTAAAAGATTGCATGGGAGAGGGATTAAGGTATATTATAGATAGAGATCAATGTGAAATCTATTAAATGTGTTTGAGTACCTTGTTTTGCGCAAATGATGGCGGTTCATTTTTGAATTTGAG # Right flank : TACAAATGTACCCAATTTGGGTGTGTGGGTGTTTGAGAAAGATTGTAAAGTTAATGTATATGGAAACTAAAATCAATGTAATCTATTTATATTTGAGAATGATGTAAAAGGTTAAAGGCGGCAAGTTTTTTGCTACCTTTATTTGTTTTAAAGCTTACAAAAGTCGCTTTATCGTATACCTATTTTGCTATGCTATAACTATAAAGAAACATAAACAAAAAACGTTTTTTCTATTGATATATTAATTATAAATAATTTCCTGTATAATATTGGAGAGGCAAAATTTGTAAAAACAAATTTAAATTAAAGATAATATATGAGGTGTTAGTTTTGAGCCATGAATTGAAGAACATTAACGAATTTAATATAGAAAAATATTTAAGAGAAAGCAAGGACAGAGGAGCCAATATTATGACACTTAGACAACAATCCGAGTATATCATCCGTCATGCACTCCACAGCGTTCTCCCGGATGAGGCGGTAAAAGCTGTTCTGACCGG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAACGTATGGTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //