Array 1 258520-257033 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017025.1 Campylobacter coli strain 14983A chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 258519 36 97.2 30 A................................... TATCGTATTTTAATTTAAGTCCATTTTTTT 258453 36 100.0 30 .................................... AATGTAAAATGTTTAGAAGTGATTTACAGC 258387 36 100.0 30 .................................... TGTACGACTTTCAATCTCTTTAATTGTTTG 258321 36 100.0 30 .................................... GAAATAAGCCCATTTATCTATTAAAAAGCT 258255 36 100.0 30 .................................... GCTTTAGGAAATGCTTTAAAACGCTTTGGT 258189 36 100.0 30 .................................... ACCAAATTCTAAACTTTGTCTATCAAGTTT 258123 36 100.0 30 .................................... AAAAGTGATAATCTTGCTTTTGGTAGTTTA 258057 36 100.0 30 .................................... GGAGAAGAGATAAATAAACAAGTTTTAAGC 257991 36 100.0 30 .................................... CTTTTTTATTTTATAACCACAAATAAAAAC 257925 36 100.0 30 .................................... ATTGCAGATTTTATGGCTAGAAAAATGGCA 257859 36 100.0 30 .................................... CTAGTATTTAGTGATACTTCAGCAAAAGCA 257793 36 100.0 30 .................................... ATGATAAAGATTTACCAACAGAAAAAAGAA 257727 36 100.0 30 .................................... AAAGTTACTTGATTGGGCAAAAGAAGATTA 257661 36 100.0 30 .................................... ATAGAAATTTTATAGGTTGCGAAATAGACA 257595 36 100.0 30 .................................... TTTTATAATAAAAATATACCCTGTGAATTC 257529 36 100.0 30 .................................... CTAAAGTTAGAAATTGCGTCTATTAACCAT 257463 36 100.0 30 .................................... CTTAAAAATGATGATGGGGCTCTAGTATTT 257397 36 100.0 30 .................................... ACTGAGGTATTCATCAAGTTTTGAAGGAGA 257331 36 100.0 30 .................................... TAATAGGTTATTTTAATGATTTAGAAAAGA 257265 36 100.0 30 .................................... CAAAGTGCGGAAAAAGATAGAAACTTGCTT 257199 36 100.0 29 .................................... TAGTGATGGCAATTGGCTCGAAAACATAG 257134 36 100.0 30 .................................... TGAAATTCATAATATAGAATATGAGGCTAA 257068 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.9 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : ATAAAACCAGGTAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAGCCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAACATAAAGTTTGAAAATGGACGCATTTTAGCCAATCTTGAAGGCAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGCGCCAAAAGAATGTGAAATTTTAGAAAATGAAAGTTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGCGGAGTTTCAATCCACTAGGGTTT # Right flank : AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTAGTTGTATTTCTTCATTATTTGAATTTTTGTATTTAAATTCTCCATGACTATCTATATCAAAAAGTGTTAAATTGGTTTCGTTATTAACTTTTTCATTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTGTTTCTAAATTTACTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //