Array 1 345-44 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANMO01000233.1 Rhodopirellula europaea 6C c6C0233, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	===============================	======================================	==================
       344	    31	 100.0	    38	...............................	TCAGTTTGGAGTTTAGAAGAATGGCAAGTCTGGAAGGT	
       275	    31	 100.0	    36	...............................	TCTTGGGTGCTCTCGCCAATCTCGAGGCAGCATTGT  	
       208	    31	 100.0	    36	...............................	TTGCAATCGTGCGCCTTAATCTCGCGGACCGCTTGT  	
       141	    31	 100.0	    36	...............................	TGTGTCCCCCGATCTTGCGAAGATCCAATCGAGTGT  	
        74	    31	 100.0	     0	...............................	|                                     	
==========	======	======	======	===============================	======================================	==================
         5	    31	 100.0	    37	CGCGCTCCTCACGGGGCGCGTGGATTGAAAC	                                      	       

# Left flank :   GCGTGTGACACAAAGGGGACCGCGATGGTAATGTTGGTGACGTACGACGTGAGCACAGCAAGTGCCGCGGGCAAACGGCGTTTGCGGCTGATTGCGAAAATCTGTCTGGACTACGGCCAGCGAGTCCAGAACAGCGTTTTCGAGCTGGATCTGGATCACGCCAAGTGGGTCGAATGCCGCGCGAGGCTCATTGAGGCCATGGAGCCGAACGAAGACAGCCTGCGTTTCTACCGACTCGGCAACCACTGGCGAGAACGGGTCGAACACATTGGCACCAAACCCTCGACAGACCTCAGTGGCGGCACGCTAATGGCATGATCGCGAACATGAAGCGCGCATAAGAAACCAGCCGGGTTCGCGATCAACGCTTCTCTCGCGGTGAACCGGTGTTTTGGTCACCAAACGGGCACATGACACGGTCACATAGCATCTCTCCCCCTCGGGTTCGCGAATTGATACGATTTCAAGTAGCAATGGTCGCCTCTCGCGACCAATGCAGT
# Right flank :  CCGGTTTCGCAGCACATCGGGTCGAGAGTTGTAGGTCGCGCTCC

# Questionable array : NO	 Score: 9.06
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCTCCTCACGGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [7,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-6.00,-7.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [26.7-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,10.05   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//


Array 1 1-295 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANMO01000238.1 Rhodopirellula europaea 6C c6C0238, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	===============================	=====================================	==================
         1	    28	  90.3	    34	---............................	CAAGACGCCACCGAACAAAGCGTGGAGGCCAAGT   	
        63	    31	 100.0	    36	...............................	ATTGAGTACAAACCATCAATGCCAACGCAGGTGTGT 	
       130	    31	 100.0	    36	...............................	ATCCAGTTCGATCGAGTCCAGGAACTTGTTGGCAGT 	
       197	    31	 100.0	    37	...............................	GAATGGAAGGAATGACACGAATTAGACCTGCTCCCGT	
       265	    31	  71.0	     0	.........T..T........T.G.C.CCCT	|                                    	
==========	======	======	======	===============================	=====================================	==================
         5	    31	  92.3	    36	CGCGCTCCTCACGGGGCGCGTGGATTGAAAC	                                     	       

# Left flank :   |
# Right flank :  TTGGTAAGGAGGCTACTGATTTGACACGTCGTTTCCTCTTAGCCTTCGCTGTTTTGAACACTGACGTGGACGGTACCGTTTTCGTTGGAGACGCACCTGATGTCGACGTTCAAAAAACGTTGCAACACGTCGATGTGGGTTTGGCTGTGCAGCGACAACGGTCCGGTGCAAAATTCGCTTCGGTATCCGTTGCGTGCCGCCAAGCCCATTGGCAACAACAGTTGATCGGCGAGGTACACGCCCACCGGAACTTCGCTGGCCAAATGGGCTCGTGCTTCGCGCAGCGCCGCACGGGCGACCTGTTCCGCTTTGACGCCGACCTTGCCGAAACCAATGATCAGTTCACTGACATTGTCAAACCCCAGCTCGATCATCACGACGTTGCCGGGACCACCCGCCTGCTGAATTTCGACGACCTGGAACGCCTTTTTGTCCCATCCGGTTTTTCGTGCGATCACATCACACTCCCGCTGGCCGACCGATTCTGGAATCCTGGAAAC

# Questionable array : NO	 Score: 8.50
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CGCGCTCCTCACGGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.50,-4.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//