Array 1 1205073-1205768 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ========================================================================================================= ================== 1205073 32 100.0 34 ................................ CCATTCGCGGAATGCTGACAAAGCTGGTTGCACC 1205139 32 100.0 33 ................................ GATTTGACTTTGATTACGGTTGATGGAACAAAT 1205204 32 100.0 35 ................................ TTTCTACACAAGCGAAATCTTTGATTACGAGGTTT 1205271 32 100.0 33 ................................ TTGCGACTCGACTAGGCCAGCGAGAAATTGAAC 1205336 32 100.0 35 ................................ TCCTATGCTTTTGCAGCGCATTGACGAACCGATAG 1205403 32 100.0 33 ................................ CCAGCCTTGTTCGACCTCTACCTTTCCCTTTGT 1205468 32 96.9 35 ...........A.................... TACCACTGCTTTTACGAAGTACTCGTTTAGCTCCT 1205535 32 96.9 34 ..........A..................... CAGATGTCCATGTTGATTTGACCTGTCTGTAAAG 1205601 31 78.1 105 ..........A..C......-.TC......TC TCTTTGACAGATGCTACCGATTCCGCGTCTAAAGGTCACACGTTGTGTAAGTAATAGAGTCAAATAAAAGTTTCTCTGGCCCACACTCTTTTTCATTGCAAAAAC 1205737 31 78.1 0 ............T........AC..-...TCA | A [1205747] ========== ====== ====== ====== ================================ ========================================================================================================= ================== 10 32 95.0 42 GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Left flank : GTTCAAAGCCATGAATGTGGTTTTCAAAGATCAGACGTTTCCCAAACTCGATGCCCCGGTCATCCTGAGCGCGGGCTACATGTTTGTCTTTGGCGATATCAATGCCAATGATTAAGGTGGATGGTGTGATTTGCTTGATTTTCTGGTTTTGTGTATAATTCATTGCGAGTCCTCCTTGGGTATCAATTAAGGGTCCTTTTCGCTGATCAGCTTTGGACACCTCGTATCATACCAAGGGGGCTCTTTTTGTTTCAAACCTCATAAACCTTCATTACAGGAATGCTCCTTTCAAGGAGAAACGAGGACAACGAACATTCAAAGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAATGGCCTTAAATATGTGTTAATATGTACAAAAATGTAATAATGTGATCTTGTTCACTGTGCTATGATAGGAAATAGAGGCAAAATCAAACGTTTTCGGTTGTTTATTTTCCGGAAAATGGGTAAATGTCGCT # Right flank : ACTTCCACCTCTTGTTTGATTCCTTTCCTAACAGACCTATTTTCTTCTTGTAAAAGGTCTTTCCGATAAATGCTAGTCGGTTTGTTGTTGAAGGGTTTGCAACTTCAATTCGTGTAAGGAGAGTGTAAAATAGCGTAGCCATTAAAACGAATGTGCTTTCTGGCGCAATTGGGTTGTAACGAATTGGACAAACGCTTTGACGACAGAAAGGTCGAGTGCGGAATTGGAATAGATTAACCACGTTTTTCTTAATAGTGGGTGGTTATCAATGGCAAGGATGCGGTTGTATAATTGGTCGTGCGGCCGAAGGGAAATTTGAGGGATGATTGCGTATCCTAAGCCATTGCGTACCATTTCTTTGCAAGTCTCGATACGGTCGACTTCCATCGTTACCATTGGTGGCTGGCTAAAATGATGGTTCCACCAGTCTTTGATCATATTATCAAAGATTGGATCGGTTTTATAGGATATCCTTCCAATAGAAGGTAGATCACCCATAT # Questionable array : NO Score: 8.30 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:-0.70, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1219482-1220380 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1219482 32 100.0 36 ................................ CGTAATATAGTCCGCGCCGATAAAAGGGTTGTCTAT 1219550 32 100.0 34 ................................ AAATCCATATGCTTTTAGTTTTTGAATTGCTGAT 1219616 32 100.0 34 ................................ TTCGGGCGCCGCTCTTTGAACTTAGGCACAGCCC 1219682 32 100.0 34 ................................ AGCCCCTATATCGTCAAGGACCAATAAATCACAA 1219748 32 100.0 33 ................................ CTCAGACATATAATCCTCTCCACGACAGGTGGG 1219813 32 100.0 36 ................................ CTTTAGCTTATTAATTACGTTTTCCATTACTATCGC 1219881 32 100.0 36 ................................ AATATACAAATCAGTTATGCGTTCGATGAATTCTTT 1219949 32 100.0 34 ................................ AAAGATCACTGCACACCCACCAGTGCGTGACCAC 1220015 32 96.9 35 ..........A..................... AACGATGTCCATTAGGTCGTTTAACGAGCAATTAA 1220082 32 96.9 34 ..........A..................... TCTTCGAGTTCAATGATTTTCACAGTTGCTTCTA 1220148 32 96.9 35 ..........A..................... TCGAAAATGGCGGCGACTTGCGCCACTTGCAGAAG 1220215 32 96.9 35 ..........A..................... GGTTATTTTGCATAGGTCGCCTCCACTGAGATTTT 1220282 32 96.9 35 ...............G................ AACGATATAGCGAACATGCTGCAAATCATCTATGT 1220349 32 81.2 0 ..........A...........C.CA.A..C. | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 97.6 35 GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Left flank : ATAAACAAATATATAGGAACAACATCAGATTCAGTACAAGAAGAAACGATTCTCTTATCTCCTCAGGCGATTGAGCATACGCCGTCATAAAAAATGCCCCCTTCCCATCTATATAATCAATGTTTAGGATGCCCTCATTAAAAAAGCAAGCGTTACCAACATCCTAACACATGGACAAATCGTGTGTCTCTTATTGTAAAAACGGCGGTGGTGTTAGATAGAACCCTTAGTATTACAGAATACAATACGGTGGAACGATCCTTAAAGGCAAACGATTCTCGATTTCTTCAATAAGCATTCGCCGATGCTCACTTTTCTCTAGTGCGAACCTTAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAACAGCCTCGAATATGAGTTTCTATGTACAAAAATGTAATAATGTGACCTTGTTGGGTGTGCTATGATAAGAATTAGAAGGGGAACCATTCGTTTTCGGTTGTATATTTCCGGAAAATGGGTGAAATTCGCT # Right flank : TAAGACAAGCCCCACCGCTTGCTGCAACAAGTCTTTCCCTGCTCAATTCGAGTGCAAAATACGTTTCTCTTACTAGACCAACAAGTGCATCACACCTATAAATACACGTATTAAAACACAAAACTAGAAAGTAAATTCCAATTAAGGGAGGAGTAAACAATGGAAGAGAAAGAAATGTTAGAGCTCTTGTTACAGAAGGTAACTGACCTGGAATTGGGGTTGAAAGAGCAAAAAGCGCATAATGCTGTAGTTGCAAAAGATTTAAAAGAACAAAAAGCGCATAATGCTGTAGTTGCAAAAGATTTAAAAGAACAAAAAGCGTATAATGCTGCGGTCGCAAAAGATTTAAAAGAGCAAAAAGCCCATAATGCAGCCTTCGCAAAAGACTTAAAAGAACAAAAAAATTATACTGCCGGAATCACAGAGGAACTAAAAGACCAAAAAGAGCACTACCTGGCCATGGTACAAGATATCAAGGAATTAAAAGAAGATCAGCTCAT # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1334497-1334793 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1334497 32 96.9 35 ..........T..................... GGGACATTTGCCGTATAACCCGCCGCCCGCAAATC 1334564 32 96.9 35 ..........T..................... GAGGATTTATTCGGCAATGAATCGCCTATGATGTA 1334631 32 100.0 34 ................................ TAAAAAGGTAGCTCACTTTTGTCCTTTATGTGGA 1334697 32 100.0 35 ................................ ATTGAATACAGCATTACATTCATTGAAGAACCTTT 1334764 30 90.6 0 ........................--..G... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.9 35 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : GAAAAGTGCCTCCCACGAGAAATTGATGTGACGCACTTGCAAGACACGCTGGTGAACCAAGGGGCGATATTGAGCTGATGAGGGGAGGGGTATTTTCGAATAAAAGGATTTAGCATTGGTGTTTGAAGAGGGACTACCTTTAAAAATGAGACGAACAAGAACTCCAAACATTGGGTTTTGGAGTTTCTTTTTTGGTGTTCGTGGTATTAAAATGTGGTGGGATTAGAAGGATAGGTGGGAGCAACGGTTTAATTTGGTCAACCTAAAGAAGTTTGCCATTGAACATTAACGCCGTCGAAGACAAAAGCTTAAATCAGACGGTGCGAACCCCAAGCGCACATAAAATCACTAGATCACCCGCACCGAAAAAGAGTCTGAATATGAGTAAATGAGTATGAAAATGTGAAAATGTGGTTTATGTTCCTTGATATAATGAAGGGAAAGCGCGACTTTCCTATTTTATCTGTGGTTTTATTTCCAGCAAATAGGGGACTTTCGCT # Right flank : TGTCAACACAAAACTGGACAAATTTTTAAAGGTGTAAGGCTTTGTAATCGACGGGTGATTGATAGTCGAGTGAACCATGGAGGCGTATATGGTTGAACCAATGAACATAATCAAATAAAGCAAGGTCAAGTTCGTGTTGGTTAGGGAAAACCCTTCTCGATACAAACTCAATTTTAATCGCTTTAAAGGTGGCTTCTGCGACGGCGTTGTCATACGGCGTGCCTTTGTTGCTGAGCGAACGGGCGATTCCAAAGGTCGCTAGTGTCTGGTCCATCTTCTGATTGATAAACTCTCTACCACGATCGGTATGAAACAGAGCGATCTTCTGTAAGGGATAGGGAATTTTAGCGATGGCTTGTCCCACGAGCTCCTTATTCTTGTTTGGACCAGAACTGTAACCGATGATTTCACGGTTGTATAGATCAATGATGATACAAATATAATGCCAGTTTGCACCGACCCGCACATACGTTAGGTCGCTGACGACTACGGTTAGCGCT # Questionable array : NO Score: 8.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1335901-1336195 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1335901 32 100.0 34 ................................ GCCGCTATTCGTTAGCTTGCCTTGCCCCGCGAAG 1335967 32 100.0 34 ................................ TACAGTAGGGATGAAACCGAACGTCTTGGCCTGA 1336033 32 100.0 35 ................................ CATATAGTCCTGCCAGAAAATTTTCAGGATGTCCG 1336100 32 96.9 35 ..........T..................... CCGTTTTTAACATAATCCATCATGATGCGCTGAAA 1336167 29 87.5 0 ...........T.............---.... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 96.9 36 GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Left flank : GCCTTCATGATCCGGCCAATGCGGCGGCGTGAAACCGTCCACCCTTGTTTAGTAAGTTCTTTTTTGATTTTGCGCTGGCCATAGATGCCTCGGCTCTGACGAAAAAGGTCGCTGATCAATGCGGTCAGCTGTTCTTCCTCTTCTTCGTGATCCCGTTGCTTGGCTTCATAATAAAACGTGCTACGGGGGATGTTCAAAATCGCACACATGGCAGCCACTGGGTAGATCCCGCGATTTTGACGGATCACGTCTATTTTCGTCCCATGATCAGCGCCGCTTGCTTTAAAATATCTTTCCGGACGCATACAGTTGCACAAGCTGTTTCTTAAATTCGGCTGTGAACCTTCTTCGTGGACGTTTGGCTTCAGTCATGATATCCCGATCCCTTCATTGGATGATTCCATCTAGTCTAGTAGACCTTAGAGCATTTGTCCAACTAAGTGTAACCTATCCATGGATTGAAATAATGGAAGCAGTAGTGTTTCCGCCTTTTCTAGGTC # Right flank : TGTGGGCTTAAGATCCTTGCACGGTGTGGCTGTGTTTCCCCCATCTTATAAGTGCGCCAATTAACATCCACATGAATCGACGTTCGCTTGCGATAACAACTAATAAAGGTACAGAAAACCAAATAAGCAATATGAGCGCACCTACGCCCATATTGCTTATTTTCGTCTTTGTTGCCTATTTTAACGCTGGCCAAAATGCTTTATTCGCCTCGATTAAGTCGTCTAGTATATCTTTTGCTACTTTTGCACTTGGCACGGTTTTTGATAATGTGATGGCTTGCCATAGTTTTTGGTAGGAACCTTCTTCAAACGCTTCTACTACTAATTTTTCGACGCCAACTTGTTGCTCCATGAGGCTCTTTTGGAATCTAGGGATTTCTCCGACAACTAGTTTTTCTGGGCCGTTGCTGCCGACGATGCACGGGATTTCTACCATTGCTGTTGGGTCAAAGTTCGGGATGGCGCCATTGTTTTCGACAATCATTAACATCCGTTCTTTT # Questionable array : NO Score: 8.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 1342565-1344441 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1342565 32 100.0 34 ................................ GTTAATGTCCGCGCTCTTACCGCACTTATTACAT 1342631 32 100.0 35 ................................ ACTCATTTCGGCAGTCTTAGCGCCTGTCGTCTCCG 1342698 32 100.0 35 ................................ ACTATACTCGCTCCTTTATCACGCCAATGGCGCTT 1342765 32 100.0 34 ................................ CGACAAAAAAGCGCCCGCCTGCGCCACTAGCGCT 1342831 32 100.0 34 ................................ ATGTAGACACATTAATTCGCGCGCTATACATCGG 1342897 32 100.0 33 ................................ ATTCAGAATTATGTCAGTATATCCAACAACTAC 1342962 32 100.0 34 ................................ CGGGAAAGGGTGTTCATTATCGGACATCTTAGAG 1343028 32 100.0 34 ................................ TGCAATCGAAGAACTCACAAAGCGTCGCGATGGT 1343094 32 100.0 35 ................................ ATCATGTTAATGTCGTTTAACGAGTCGCCGCACTC 1343161 32 100.0 33 ................................ GATCAGGAAACGGAGCGCACAGCCCGCAAAATG 1343226 32 100.0 36 ................................ GCCTCCTTGCCTTTTATAAAGCGTTTTTCTTTGCGC 1343294 32 100.0 33 ................................ CGTTTCGATTTAAGGGATTCTCACCCACGCCAA 1343359 32 100.0 33 ................................ TATATGAAGACTCAGTATAACGTATTTGTTAAC 1343424 32 100.0 33 ................................ GGAAATGGATAAAAAAAGTCATGCGAAATCCAT 1343489 32 100.0 34 ................................ CGCGCGCTTGGCCGGCCGCAGCTCGCGCCCTCCG 1343555 32 100.0 34 ................................ AAAAATCGGAGGCCGTTCCGTTGATCGTCTCAGC 1343621 32 100.0 33 ................................ GCCGACGCCTATACATGAAGTGCCGGGAGGGCC 1343686 32 100.0 34 ................................ ACCAGCTACCCAATCACTAAACCTTTCCGCCTCC 1343752 32 100.0 34 ................................ TCTTTACAAGTTTGTTTTTATTGAGTGCTTGTGG 1343818 32 100.0 34 ................................ TCTTGCTTATTTGCAATGTTAGGTGGTGTCCATC 1343884 32 100.0 34 ................................ GCGGAGGAAGGGGACGTCATCGAACTTGAGGCGC 1343950 32 100.0 33 ................................ AAAGCTGAACGGACAGTCAGGTAAATTACGCTC 1344015 32 100.0 33 ................................ TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA 1344080 32 100.0 33 ................................ AAAGCTGAACGGACAGTCAGGTAAATTACGCTC 1344145 32 100.0 33 ................................ TCTACCTTACCCCTTGTCTTTAGCTGCCCCTCA 1344210 32 100.0 35 ................................ ACAAAAGACTAGCAACAGTGTCACAGACAGAAACG 1344277 32 100.0 34 ................................ TCTGGTCGTTTCAACGCCTTCAGGGGGGTTTCAT 1344343 32 100.0 35 ................................ TCAACTCGCGCTCAGTACGAAAATCAAAAGGCTCT 1344410 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 100.0 34 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGTTCCTCGGTTATAACGTCATCTTTTTTTTGCATGTGTTTACGCATGCAGGTCAAGCACTGCTACTGAAAATGTATACACCAGGCGTCATTACCGCCATTATCGTAACACTTCCGTATTCTCTTTATTTGTTTTACCGGTTAGCGATGGAATATAATATTCAGATTAATGATCTTATTGCCAGTATCCCATACGGATTGACGATTATTCCAATCGTGGCTTTCGGTCATCTACTAGCTAAAACTGTGGTTCGGTAAAAAATGTTGAGGTAACCCATGGATGTTTTCAGTTTACTTCAATATCAAACAACTACTATTTTGGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGCACTTAAATATGGGTTAATGTGTGGAAAAGTGTTAAAATGTTGTTCATATCCCATGGTATGATATAGGAAAAGAGCGGCTTTTCTCTATGATTCATCAATTAGTTTCCAATAAATAGGGGAATTTCGCT # Right flank : TTTTAGTAGCCTTACGGAACCGGCCGAAATTTTCGTTGGATAGGTTACACTTAGTTGGACAAATGCTCTAAGGTCTACTAGACTAGATGGAATCATCCAATGAAGGGATCGGGATATCATGACTGAAGCCAAACGTCCACGAAGAAGGTTCACAGCCGAATTTAAGAAACAGCTTGTGCAACTGTATGCGTCCGGAAAGCCGAGAGCGGAAATCATCCGTGAATATGAACTGACGCCATCTGCTTTTGATAAATGGGTTCGTCAATACCAAACAAGTGGCGCATTCACCGAGAAAGAAAATCGTACGCCTGAACAAGAAGAGCTGATCCGCCTACGAAAAGAAAACCAGAAGCTCGCTATGGAAAATGATATTTTAAAGCAAGCGGCGCTGATCATGGGACGAAAATAGACGTGATCCGTCAAAATCGCGGGATCTACCCAGTGGCTGCCATGTGTGCGATTTTGAACATCCCCCGTAGCACGTTTTATTATGAAGCCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 1345714-1346545 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1345714 32 100.0 34 ................................ TTTTGTGTAAGCAATAAGCGCACGAACAACCATG 1345780 32 100.0 34 ................................ GCGAGTTCCATCGAACGCCTCAGCGAATGGTAAT 1345846 32 100.0 35 ................................ ACGAACGCGCTGAAAGAACAGATTATGCGGAACAC 1345913 32 100.0 35 ................................ TGAGCTTACCGGACTAGTTAACACTTGGGCGATAG 1345980 32 100.0 36 ................................ AAGGATGCGGTGCTTGAAAAAGGAGATGACGCTAGA 1346048 32 100.0 35 ................................ TTATCTTCTTGACTTCGGGAGCGGGACCATATCTC 1346115 32 100.0 37 ................................ GCCAATTGAGTCCGTCTATATAGCTGCGGACAATGAC 1346184 32 100.0 34 ................................ GTTGCAAATATGAAGCTCTTTCCAACACATATCT 1346250 32 100.0 34 ................................ CAATACAAAAAGCCTGTCCAAGTAGCTAGACTGG 1346316 32 100.0 35 ................................ TCTAAAGGTGTACCACATTTACGAGAGGAGCTAGA 1346383 32 100.0 34 ................................ AAATAAATGGCCCGCACACCAAGTCAACAGCGCC 1346449 30 93.8 35 ..........--.................... ACATAACAGCTAGTGCAGCAAAACAGATTGTGCTG 1346514 32 96.9 0 ..........A..................... | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 99.3 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : AACCGTAGTCGTCAGCGACCTAACGTATGTGCGGGTCGGTGCAAACTGGCATTATATTTGTATCATCATTGATCTATACAACCGTGAAATCATCGGTTACAGTTCTGGTCCAAACAAGAATAAGGAGCTCGTGGGACAAGCCATCGCTAAAATTCCCTATCCCTTACAGAAGATCGCTCTGTTTCATACCGATCGTGGTAGAGAGTTTATCAATCAGAAGATGGACCAGACACTAGCGACCTTTGGAATCGCCCGTTCGCTCAGCAACAAAGGCACGCCGTATGACAACGCCGTCGCAGAAGCCACCTTTAAAGCGATTAAAATTGAGTTTGTATCGAGAAGGGTTTTCCCTAACCAACACGAACTTGACCTTGCTTTATTTGATTATGTTCATTGGTTCAACCATATACGCCTCCATGGTTCACTCGACTATCAATCACCCGTCGATTACAAAGCCTTACACCTTTAAAAATTTGTCCAGTTTTGTGTTGACATTCCAC # Right flank : TATGCCTTGAGACTTTGCCCCCTGGGTTAGAGAGCAGGCCCCTATGCGCTGTTTCCTCATCCATCTTGAGGTAAAGCTGTCCTTTTTTCTGGAATCTTACAATTTCCATGCCTGCCAAAATGGAGCGACCGTTTTTATTGCTGTGATTAGTGTTAATAGAAAAAATGACTAGCTACAGGAGGAAGCGAAATTGGAAATTCGTACAGTGAAAGGCTCTGACTACTATGTCATTTCCCCACTAATTAATAAGTGGTGGGGTGGAAGAAAGATGTCGGATAAGTTACCGAAATTATTTTTCGACCATTTTTCTAATACAAGTTTTGTTGCTGAAAGGGATGGAACACTTGTCGGCTTTCTAATCGGATTCTTTTCTCAATCTCATCAAAAAGTAGCCTATATACATTTCGTTGGAGTCCACCCTGATTATAGAAAGCAAAGTGTTGGCAACCTATTATACAATCGATTTTTTCATGTGGTTCAGCAAAACGGGCGAAATATTG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 7 1353793-1355075 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1353793 32 100.0 34 ................................ CCACAAGGTCGAGACATTCGAACGGAACGATTCG 1353859 32 100.0 33 ................................ GTATCTCGGCAAATAAGTCGCCCGCCGCCGCAC 1353924 32 100.0 33 ................................ AGGTTGTGTCGGAAATGTGTGGAAGAACTTAAC 1353989 32 100.0 33 ................................ GCGCCTCGTCCTCGGAATAAACGGGACGCTTGT 1354054 32 100.0 33 ................................ CCTACCAAAGCCAAAGGGCCAAACTAGTGATAA 1354119 32 100.0 35 ................................ GACCAAGTATCCGTTGAGGTGTTATCTACCATCAC 1354186 32 100.0 33 ................................ ATGTCAATTCCCGGACAAGCAGTGCTCGCGCCC 1354251 32 100.0 36 ................................ TAATTGATCTGCCGGACATACTCGCGCTAAAACGTA 1354319 32 100.0 33 ................................ GACGTTACCGTCCGCGCGACGTTTAACACGAAA 1354384 32 100.0 33 ................................ TAACCGCGGGCATGGAGATCGTGCACACGCTCA 1354449 32 100.0 35 ................................ AACGGTAAAGTGGACGAATCGGATGCGGTGAGACA 1354516 32 100.0 35 ................................ ATTGTTATTTATCGGGATCGCCTTTTTAGATATGC 1354583 32 100.0 35 ................................ CAGAAAGTCAAAAATTACGAAAACCGAACACTCTA 1354650 32 100.0 33 ................................ GTAAGTCTTGCCCGTCTCACGCGCCAGCTCCAT 1354715 32 100.0 34 ................................ GGCATGCCTACGTCTCCTTGTACAGTATCAAGCA 1354781 32 100.0 33 ................................ GAGGAAATCAATAACGCTCCACAAACGTTTTCT 1354846 32 100.0 34 ................................ GCTCACTCCTCCGTGTCTCCATTTCGGTCGCTAC 1354912 31 96.9 35 ..............-................. TGCTGCAAAATCGTTCTATCACCTGATGCCTGATT 1354978 32 100.0 34 ................................ CAGTAAGGAGGAGTAGTGTCATGAAACATGATTT 1355044 32 75.0 0 ..........TCA...C...A.......C.CC | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 98.6 34 GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Left flank : GAAATGGCAAAATCAAAAATCCGCATGGTTGGCAGTGAAAACACGGTAGTGCCAGCATTTGCGTGAAAAGCGTAAGCCCGGAGTCCTTCACCTTCGCTTGTTAGGCTATGTACTAACAAGCGGAGGTGTTTCTTTCATTAATTGGGAAGGGGGAGAAGAACTCAATCGAATAGGTGTATAAGCAAGGAACTTTCCTTACGCCAACAGGAGTTTTCTTATCAAATATAGTAAAATAGACAGTAGTAGAGACAGACACAATTGACGAGGGAGATTAACATTTACAATTATTCATTTTAGTATTTTGAACCTGTGATTCTTTAGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGAGCTTGAATGTGGGTTAATGTGTGAAAAAGTGTTAAAATGTTGTTCGTGTCCCATGGTATTATATAGGAGAAGAGCGGCTTTTTCCTATTATTGATTGTTTGGCTGCCAACAATTAGGGGAATTTCGCT # Right flank : CCTCGTCACTGCTTCTAAAGGAAATGCACAGTTGTAGCGGTGTTGGAAAAATAAGTTCTTTGTCGTGATGATAGAACAGCAGCTCATAGCTTTGGCAGTTAGTAAAACATGTCTATCTTCACAGTGATTCCAAATATTCACCATTTGTCTGGATCGGTGAATGCCGAAAATCTATTTAAGTTGTTGGAGGGAGTAGTCAGCATGTTAACAAGGGAAGATATCTTTAAGCACGTCAAAGAAAAATTCCGTACATCGCCTGATTATCCATTTCAAAAATTTCCAACCTATGCTGCTTTGAGACATAAAGCGAATGGAAAATGGTATGGCCTTGTTATGAATGTTCATCCAGAAAAATTAGGGTTGGATGGAAATGACGAAATAGATATTCTGAATTTAAAATGTCATCCTGAAGTAAGTGGCAGTTTGAGAAATGGAAAGAGTATTTTACCTGGATACCATATGGATAAGGAAAATTGGATATCAATTGTTTTGGAACGTGT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 8 1358899-1359328 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1358899 32 100.0 33 ................................ TCGCGTAATAAATCGTCTTAATCCCCTTATGAT 1358964 32 100.0 35 ................................ ATCCATACATTTCGGTCGTTCCGACACAGGCTGCG 1359031 32 100.0 34 ................................ CGCTCAGGATGTCCCCAACCCCTACTGTTTTAAG 1359097 32 100.0 36 ................................ ATACAAGGATTTAAGGAAATAGATAAACACTATTGC 1359165 32 100.0 34 ................................ CCTGACTTTTTAATCATGCCATATCCGGTAAAAA 1359231 32 100.0 35 ................................ TCAACGTAGTCATGGAACTCTGCAAACGTCGTAGC 1359298 31 78.1 0 .........C.T.......T...A...-..CC | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 96.9 35 GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT # Left flank : GGAGTCTCGTTCACTTAGGAAAAGTGAGTTCATGGCTTTTATTAGTGATTGTTAGTTTCCTGATTGTAGCGACATTAAAACAAGTGAAAGGGAAGAGATCCACTGGTGTAGATGCTAGTCAGTCTTTTATAAAAAAGCAGTGAGTGCTTTTTTATAATGAAGAAACAACCATTCTTACTGTTAGTATTAATGGAAAGAAACATAAAATGAATGAAGGACAATAGATCGAAAGGGGCGATATAAGAATAGAAGGGAACAACATCCACAGTTTGATCTTCTTAATCTTCCAAGAAAAAGAGGAGCAAAGAAGCAGCATTTTTAGTGCGAACCCCAAGCGCACATAAAATTACTAGACCACCCGCACCAAAAAAGAGCCTAACTATGGAAAAATATGTGCGAAAATGGTTAAATGTTGTATATGTCCCATGGTATGATAGAAAAAAGAGCAACTTTTTCCTATTATTGATTGTTTAGATTCCAATAAATAGGGGAATTTCGCT # Right flank : CAGCGCAATCAAAGGCGGCAACAAACTAGCGGTTTTCCGCATTGCCGCCTACGACAAGGAAAAGAAGAAACGGGTTTCTTCAAAGCAAAAAAAGCTTATTTATCAAAAATAAAGACAAACTCGAAGAATTATATGCCAGTCTCCAAAAAGGACAGCTAATCTCTGTCGAGCACAAAGAAAACAACGGATATACAAACATTTATGGTCTGATGGATCGCTCTTACGCAGACAGACGCAAGTCAGCGCAGAGAGGACAGGAAGCGGAAGCAAAAAGAGTGACTGGTCGTGCCAGTCACTCTTTTTTTGACCTATACTTCGAATAAATATTATAGACAAGCGCTCACAAATTCGCTATTTATCACAGTTTAATCCTTTGTGAACCGATCTTGTTCTTCAAACTCAAAAATGATTGATTTTACATTGTGTAGATTCTCTTCTGCAAATGTATCTTGATCATTCTTATCCTCTATATACACCATTGCATTGGTCTCTATTTGATA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 9 1361758-1362784 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031128.1 Alkalihalobacillus clausii strain 088AE chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1361758 32 100.0 34 ................................ ATTCCTTTGCCCCCTCTAGTAATCGCTTCGAAAT 1361824 32 100.0 35 ................................ CGGGATTACCTATACGCAGGATGACGCAAAGCTGA 1361891 32 100.0 34 ................................ GTAGCTGAAATTTCCCTTCCTTTCGATGTGTTGA 1361957 32 100.0 34 ................................ TCTCCTATTATTTTTTTATTAATCTACTTATCAT 1362023 32 100.0 34 ................................ GCCAAATATGTCGTGATAGTAACGTTTTAGAGCG 1362089 32 100.0 34 ................................ TTGTGTCATGTCGTTATTAATCCCAAGTTGCTTG 1362155 32 100.0 35 ................................ TGCTACAAAGGGCGAGAAGTCCTTAAAAGACCTAA 1362222 32 100.0 32 ................................ ACGCCTGCCAAGCCATCGAAGCGTAACGCCAA 1362286 32 100.0 33 ................................ AACGGTATCTCAGCGTCCTGACTACGTACCTTG 1362351 32 100.0 33 ................................ AGCATATCTTCAACAGATTTTCGAAGCGTCATC 1362416 32 100.0 35 ................................ AAGAGAGGAAAACACTGAAAAAGAAAAAGGGGATG 1362483 32 100.0 35 ................................ CTATCGAGGACGTTGTTAAGATAACTAAGGACTAA 1362550 32 100.0 37 ................................ TCTTTGTCTGCTAGGCTGTCTAACGGCGGTTCAATCA 1362619 32 100.0 35 ................................ AAATAATTGATAAATTAAGCAGCTAAAAAGATAAA 1362686 32 100.0 35 ................................ GTAATAGCGTGGCCGCATCTGAAAAGGCTGTTAGT 1362753 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 16 32 100.0 34 GTCGCACTCTTAATGAGTGCGTGGATTGAAAT # Left flank : CTTGTCAAACGATAAACGGAACGGTTCAGGAAACATATTTGCTTCTCAATCGTAGCAACTAAGAAGACATAAAAGCGCTTTACATAAGCTCGGCAAGAATGGCCCTGGAAGAAGTAGAAACGGTTTTCAGGCACTCGCCTAGACAGCGTCTTAACAGCAAGGATCAGGCCCATTTCATACACATATCAAACAAGAATGGCGAAACAGATACACAACTCATAGGGGAGAAGGGATGTTAGTAGGCAACCGACTCCCCTCAATCGTTTCTTTGTGAGCAAGCGAAAAGTTCTGTATGATTGAAGAAGATCAAAAAACACTTGGTGCGAACCCCAAGCGCACATAAAATCCCTAGATCACCCGCACCAAAAAAGAGCTTAAATATGAAATAATATGTGTAATGATGGTAAAATGCTATACGTATGCCATGATAGAATAAAAGAAAAGAGCGGCTTTTTCCTATAATTGATTGTTTTCCTGTCAATAAATAGGGGAATTTCGCT # Right flank : TTGCTTGATTACGGCGTCTGACATCATGCCGTCACGTCACACTCTTCGTAAGTGCGTGCTCGTTCGTATGCAACCTAATAACCAGTAGGTTATCGACGTAAGGCATTTGGGAGGCGGATCTGCCATAAAACGAAAAACAGTAGTTTTAGGTATAAGTGGGTTTCTAGTAATTGGTATGGCTGTAAGTGCAGTCATCTTATTGAATGCGGACAAGGAATATGTGCCAGGGGGAACTCAATTAAAAAAGAATGAAAGAGACTCGATTGATTATTGGACCAAAGACAACATGAAAAAAGCTGTTCCAGGGGCAGGAATGGACGAATAAGCCTGCTCCTCGAACAGCTTTTGCTAACTAGTTGGTGTTTGGTTTCGTTCGTTATTTTTTTCTGAACTGGTGTTTAAAGCGGTTAAACGGGGTGAAGTATGAAACTGCGTAGTCTAAGTTAATGAGCTCGCTGTATTCAAAGACGCGCCCGTCGTTAAGAATGCCGCGATTGACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTTAATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //