Array 1 125883-124573 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGKB01000017.1 Escherichia coli strain 11a6 NODE_17_length_134850_cov_124.74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 125882 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 125821 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 125760 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 125699 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 125638 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 125577 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 125516 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 125455 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 125394 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 125333 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 125272 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 125211 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 125150 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 125089 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 125028 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 124967 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 124906 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 124845 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 124784 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 124723 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 124662 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 124601 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //